Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_006884.2 Length=178249 Score E Sequences producing significant alignments: (Bits) Value seq1113 376 3e-99 seq244 376 3e-99 seq1320 372 3e-98 seq993 372 3e-98 seq1136 307 1e-78 seq965 264 1e-65 seq1074 217 2e-51 >seq1113 Length=8127 Score = 376 bits (416), Expect = 3e-99 Identities = 705/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Plus Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854 ||||| || | ||||| |||||| ||| || || ||||| || | || |||||||| Sbjct 1825 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 1884 Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914 || || || || |||||||| || | || | || ||||||||| ||| || || || Sbjct 1885 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 1944 Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974 || || |||||||| || ||||| | || || ||| | || || ||||| ||| Sbjct 1945 GTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGCAACTTCTTA 2004 Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034 || || ||||| || || |||| | || | | | ||| | | ||||| |||||||| Sbjct 2005 ACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGT 2064 Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094 ||||| |||||||||||| || || |||| ||||||||| || || |||| ||||| Sbjct 2065 CCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTT 2124 Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 172154 || | || || | || ||||| |||||||||||| | | || ||||| |||| | Sbjct 2125 GCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGC 2184 Query 172155 CTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACG 172214 |||| | || ||||| || ||| |||||||||| || ||||| || || Sbjct 2185 TCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTTGTT 2244 Query 172215 AGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGT 172274 | || || || |||||| |||||||| | |||||||||| || ||| |||||| Sbjct 2245 TCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 2304 Query 172275 GTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAAT 172334 || || || || ||||| | || | || | || || || || ||| || | || Sbjct 2305 GTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 2364 Query 172335 CCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACAT 172394 || |||||||||||||| || || ||| || | || | || | ||||| ||||| ||| Sbjct 2365 CCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCCATTCAT 2424 Query 172395 GGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATT 172454 || || || ||| | || || || | |||||| || | | | | Sbjct 2425 GGCGCTACCGTAGAAAATACTTTATTTGAAGA---------------TG--GTGATGGTG 2467 Query 172455 CAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 172514 ||| | || ||| | || || | || || || | |||||||| ||| ||| | Sbjct 2468 CAAAC----ACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTC 2523 Query 172515 ACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTA 172574 || |||||| | || ||||| || || ||||| | || ||||| || ||| | | ||| Sbjct 2524 ACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 2583 Query 172575 CACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTA 172634 || ||| ||||||| || ||||| || | ||| | |||| || | || | || Sbjct 2584 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTC 2643 Query 172635 GGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 172694 || || || || ||||| | || || ||||| || || || || || | ||||| ||| Sbjct 2644 GGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 2703 Query 172695 GACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 172754 || || || ||||| || |||||||| || || |||||| | || || ||||| | || Sbjct 2704 GATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCT 2763 Query 172755 TGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCA 172814 |||||| | || ||||| || ||||| ||| || | ||||| || || || | || Sbjct 2764 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCC 2823 Query 172815 CGAGGCAACGCACTATAA 172832 || || ||||| || ||| Sbjct 2824 CGTGGAAACGCTCTTTAA 2841 >seq244 Length=4089 Score = 376 bits (416), Expect = 3e-99 Identities = 705/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Minus Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854 ||||| || | ||||| |||||| ||| || || ||||| || | || |||||||| Sbjct 3469 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 3410 Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914 || || || || |||||||| || | || | || ||||||||| ||| || || || Sbjct 3409 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 3350 Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974 || || |||||||| || ||||| | || || ||| | || || ||||| ||| Sbjct 3349 GTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGCAACTTCTTA 3290 Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034 || || ||||| || || |||| | || | | | ||| | | ||||| |||||||| Sbjct 3289 ACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGT 3230 Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094 ||||| |||||||||||| || || |||| ||||||||| || || |||| ||||| Sbjct 3229 CCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTT 3170 Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 172154 || | || || | || ||||| |||||||||||| | | || ||||| |||| | Sbjct 3169 GCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGC 3110 Query 172155 CTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACG 172214 |||| | || ||||| || ||| |||||||||| || ||||| || || Sbjct 3109 TCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTTGTT 3050 Query 172215 AGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGT 172274 | || || || |||||| |||||||| | |||||||||| || ||| |||||| Sbjct 3049 TCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 2990 Query 172275 GTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAAT 172334 || || || || ||||| | || | || | || || || || ||| || | || Sbjct 2989 GTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 2930 Query 172335 CCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACAT 172394 || |||||||||||||| || || ||| || | || | || | ||||| ||||| ||| Sbjct 2929 CCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCCATTCAT 2870 Query 172395 GGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATT 172454 || || || ||| | || || || | |||||| || | | | | Sbjct 2869 GGCGCTACCGTAGAAAATACTTTATTTGAAGA---------------TG--GTGATGGTG 2827 Query 172455 CAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 172514 ||| | || ||| | || || | || || || | |||||||| ||| ||| | Sbjct 2826 CAAAC----ACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTC 2771 Query 172515 ACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTA 172574 || |||||| | || ||||| || || ||||| | || ||||| || ||| | | ||| Sbjct 2770 ACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 2711 Query 172575 CACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTA 172634 || ||| ||||||| || ||||| || | ||| | |||| || | || | || Sbjct 2710 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTC 2651 Query 172635 GGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 172694 || || || || ||||| | || || ||||| || || || || || | ||||| ||| Sbjct 2650 GGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 2591 Query 172695 GACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 172754 || || || ||||| || |||||||| || || |||||| | || || ||||| | || Sbjct 2590 GATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCT 2531 Query 172755 TGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCA 172814 |||||| | || ||||| || ||||| ||| || | ||||| || || || | || Sbjct 2530 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCC 2471 Query 172815 CGAGGCAACGCACTATAA 172832 || || ||||| || ||| Sbjct 2470 CGTGGAAACGCTCTTTAA 2453 >seq1320 Length=5450 Score = 372 bits (412), Expect = 3e-98 Identities = 704/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Plus Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854 ||||| || | ||||| |||||| ||| || || ||||| || | || |||||||| Sbjct 4410 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 4469 Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914 || || || || |||||||| || | || | || ||||||||| ||| || || || Sbjct 4470 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 4529 Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974 || || |||||||| || ||||| | || || ||| | || || ||||| ||| Sbjct 4530 GTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGCAACTTCTTA 4589 Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034 || || ||||| || || |||| | || | | | ||| | | ||||| |||||||| Sbjct 4590 ACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGT 4649 Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094 ||||| |||||||||||| || || |||| ||||||||| || || |||| ||||| Sbjct 4650 CCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTT 4709 Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 172154 || | || || | || ||||| |||||||||||| | | || ||||| |||| | Sbjct 4710 GCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGC 4769 Query 172155 CTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACG 172214 |||| | || ||||| || ||| |||||||||| || ||||| || || Sbjct 4770 TCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTTGTT 4829 Query 172215 AGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGT 172274 | || || || |||||| |||||||| | |||||||||| || ||| |||||| Sbjct 4830 TCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 4889 Query 172275 GTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAAT 172334 || || || || ||||| | || | || | || || || || ||| || | || Sbjct 4890 GTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 4949 Query 172335 CCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACAT 172394 || |||||||||||||| || || ||| || | || | || | ||||| ||||| ||| Sbjct 4950 CCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCCATTCAT 5009 Query 172395 GGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATT 172454 || || || ||| | || || || | |||||| || | | | | Sbjct 5010 GGCGCTACCGTAGAAAATACTTTATTTGAAGA---------------TG--GTGATGGTG 5052 Query 172455 CAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 172514 ||| | || ||| | || || | || || || | |||||||| ||| ||| | Sbjct 5053 CAAAC----ACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTC 5108 Query 172515 ACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTA 172574 || |||||| | || ||||| || || ||||| | || ||||| || ||| | | ||| Sbjct 5109 ACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 5168 Query 172575 CACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTA 172634 || ||| ||||||| || ||||| || | ||| | |||| || | || | || Sbjct 5169 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTC 5228 Query 172635 GGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 172694 || || || || ||||| | || || ||||| || || || || || | ||||| ||| Sbjct 5229 GGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 5288 Query 172695 GACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 172754 || || || ||||| || |||||||| || || |||||| | || || ||||| | || Sbjct 5289 GATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCT 5348 Query 172755 TGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCA 172814 |||||| | || ||||| || ||||| ||| || | ||||| || || | | || Sbjct 5349 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGATCTACCC 5408 Query 172815 CGAGGCAACGCACTATAA 172832 || || ||||| || ||| Sbjct 5409 CGTGGAAACGCTCTTTAA 5426 >seq993 Length=11053 Score = 372 bits (412), Expect = 3e-98 Identities = 705/1038 (68%), Gaps = 22/1038 (2%) Strand=Plus/Plus Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854 ||||| || | ||||| |||||| ||| || || ||||| || | || |||||||| Sbjct 8544 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 8603 Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914 || || || || |||||||| || | || | || ||||||||| ||| || || || Sbjct 8604 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 8663 Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974 || || |||||||| || ||||| | || || ||| | || || ||||| ||| Sbjct 8664 GTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGCAACTTCTTA 8723 Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034 || || ||||| || || |||| | || | | | ||| | | ||||| |||||||| Sbjct 8724 ACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGT 8783 Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094 ||||| |||||||||||| || || |||| ||||||||| || || |||| ||||| Sbjct 8784 CCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTT 8843 Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 172154 || | || || | || ||||| |||||||||||| | | || ||||| |||| | Sbjct 8844 GCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGC 8903 Query 172155 CTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACG 172214 |||| | || ||||| || ||| |||||||||| || ||||| || || Sbjct 8904 TCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTTGTT 8963 Query 172215 AGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGT 172274 | || || || |||||| |||||||| | |||||||||| || ||| |||||| Sbjct 8964 TCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 9023 Query 172275 GTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAAT 172334 || || || || ||||| | || | || | || || || || ||| || | || Sbjct 9024 GTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 9083 Query 172335 CCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACAT 172394 || |||||||||||||| || || ||| || | || | || | ||||| ||||| ||| Sbjct 9084 CCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCCATTCAT 9143 Query 172395 GGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATT 172454 || || || ||| | || || || | |||||| || | | | | Sbjct 9144 GGCGCTACCGTAGAAAATACTTTATTTGAAGA---------------TG--GTGATGGTG 9186 Query 172455 CAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 172514 ||| | || ||| | || || | || || || | |||||||| ||| ||| | Sbjct 9187 CAAAC----ACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTC 9242 Query 172515 ACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTA 172574 || |||||| | || ||||| || || ||||| | || ||||| || ||| | | ||| Sbjct 9243 ACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 9302 Query 172575 CACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTA 172634 || ||| ||||||| || ||||| || | ||| | |||| || | || | || Sbjct 9303 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTC 9362 Query 172635 GGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 172694 || || || || ||||| | || || ||||| || || || || || | ||||| ||| Sbjct 9363 GGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 9422 Query 172695 GACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 172754 || || || ||||| || |||||||| || || |||||| | || || ||||| | || Sbjct 9423 GATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTT-TAAACGAGGGTATTCGTGCT 9481 Query 172755 TGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCA 172814 |||||| | || ||||| || ||||| ||| || | ||||| || || || | || Sbjct 9482 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCC 9541 Query 172815 CGAGGCAACGCACTATAA 172832 || || ||||| || ||| Sbjct 9542 CGTGGAAACGCTCTTTAA 9559 >seq1136 Length=8532 Score = 307 bits (340), Expect = 1e-78 Identities = 587/867 (68%), Gaps = 21/867 (2%) Strand=Plus/Minus Query 171966 AACTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTC 172025 ||||| ||||| || ||||| || || |||| | || | | | ||| | | ||||| Sbjct 3661 AACTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTA 3602 Query 172026 CTATGGGGACCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGG 172085 |||||||| ||||| |||||||||||| || || |||| ||||||||| || || ||| Sbjct 3601 CTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGG 3542 Query 172086 AACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAG 172145 | ||||| || | || || | || ||||| |||||||||||| | | || ||||| Sbjct 3541 ACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAA 3482 Query 172146 ATTGCAGGACTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCA 172205 |||| | |||| | || ||||| || ||| |||||||||| || ||||| Sbjct 3481 CTTGCTCGCTCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCT 3422 Query 172206 GTATTCACGAGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCT 172265 || || | || || || |||||| |||||||| | |||||||||| || ||| Sbjct 3421 GTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCT 3362 Query 172266 TCATTTGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATA 172325 |||||||| || || || ||||| | || | || | || || || || ||| Sbjct 3361 AGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGG 3302 Query 172326 ACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGT 172385 || | || || |||||||||||||| || || ||| || | || | || | ||||| Sbjct 3301 ACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGC 3242 Query 172386 GCCATACATGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAA 172445 ||||| ||||| || || ||| | || || || | |||||| || Sbjct 3241 GCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGA---------------TG-- 3199 Query 172446 GGTAAGATTCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTAT 172505 | | | | ||| | || ||| | || || | || || || | |||||||| ||| Sbjct 3198 GTGATGGTGCAAAC----ACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTAT 3143 Query 172506 AGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAA 172565 ||| | || |||||| | || ||||| || || ||||| | || ||||| || ||| Sbjct 3142 TCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAA 3083 Query 172566 AGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATA 172625 | | ||||| ||| ||||||| || ||||| || | ||| | |||| || | Sbjct 3082 CGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTT 3023 Query 172626 GGTATCGTAGGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGA 172685 || | || || || || || ||||| | || || ||||| || || || || || | Sbjct 3022 GGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCGT 2963 Query 172686 GCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGT 172745 ||||| ||||| || || ||||| || |||||||| || || |||||| | || || ||| Sbjct 2962 GCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGGGT 2903 Query 172746 ATGAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAA 172805 || | || |||||| | || ||||| || ||||| ||| || | ||||| || || Sbjct 2902 ATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAG 2843 Query 172806 GTCTTGCCACGAGGCAACGCACTATAA 172832 || | || || || ||||| || ||| Sbjct 2842 GTTCTACCCCGTGGAAACGCTCTTTAA 2816 >seq965 Length=51047765 Score = 264 bits (292), Expect = 1e-65 Identities = 373/524 (71%), Gaps = 0/524 (0%) Strand=Plus/Plus Query 170675 TGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTAATGATCCCA 170734 ||| |||| |||||| || || | ||| |||||||||||||||| || |||||||| Sbjct 18211486 TGGATAACTAGCACTGAAAACTGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCT 18211545 Query 170735 TGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCTCCAGTCGAT 170794 | | | || || || || || ||| | || || || |||||||||||||| ||| Sbjct 18211546 ACTTTATTGACCGCAACTTCTGTATTTATTATCGCCTTTATTGCTGCTCCTCCAGTAGAT 18211605 Query 170795 ATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTCT 170854 || ||||| || | ||||| | | | || ||| | | ||||| || || || || ||| Sbjct 18211606 ATTGACGGTATTCGTGAACCTGCTTCTGGATCTCTACTTTATGGAAATAATATTATTTCT 18211665 Query 170855 GGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATCTGGGAAGCA 170914 | || | |||| |||| | || ||||| || || || || || || |||||||| Sbjct 18211666 AGCGCGATTATTCCTACTTCTACAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCG 18211725 Query 170915 GCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTATTTTCCACTTC 170974 || | | || || ||||| ||||| || |||||||| || || || || | |||||| Sbjct 18211726 GCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 18211785 Query 170975 CTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAGACTAGGAATG 171034 | ||||| | || ||||||||| | |||||||||| | | | ||||| ||| Sbjct 18211786 GTAATTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTAGGTATG 18211845 Query 171035 AGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCAGTATTCCTT 171094 | |||||||| ||| ||||| | | | ||||| | ||||| ||| || ||| | Sbjct 18211846 CGTCCTTGGATTGCTGTTGCATATTTAACTCCTGTTGCAGCAGCGACTGCTGTTTTCTTG 18211905 Query 171095 GTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACG 171154 | || ||| ||||||| || || |||||||||||||| ||||| ||||| ||||| Sbjct 18211906 ATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACT 18211965 Query 171155 TTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAAT 171198 |||||||||||| | || ||||| || || |||||||| || || Sbjct 18211966 TTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTAT 18212009 Score = 221 bits (244), Expect = 1e-52 Identities = 377/549 (69%), Gaps = 16/549 (3%) Strand=Plus/Plus Query 170666 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 170725 |||||| | ||| |||| ||||| || ||| | ||| |||||||||||||||| || Sbjct 17866722 TTTTGTAACTGGATAACTAGTACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 17866781 Query 170726 ATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCT 170785 |||||||| | | | || || || | || ||| |||| || || ||||||||| Sbjct 17866782 ATGATCCCTACTTTATTGACCGCAACTTATGTATTTATTATAGCCTTAATTGCTGCTCCT 17866841 Query 170786 CCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 170845 ||| | ||||| ||||| || ||||| ||| | || ||| | | ||||| || || Sbjct 17866842 CCAATAGATATTGACGGTATTCATGAACCTGTTTCTGGATCTCTACTTTATGGAAATAAT 17866901 Query 170846 ATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATC 170905 || || | |||||| | |||| |||| || ||||| || || || || || || Sbjct 17866902 ATTATTTTTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGATA 17866961 Query 170906 TGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTATT 170965 |||||||| || | | || || ||||| ||||| || ||||||| || || || || Sbjct 17866962 TGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCAGTCCTTATGAGCTAATTGTT 17867021 Query 170966 TTCCACTTCCTTATTG--GAATCT--------------CTGCCTACATGGGTAGACAGTG 171009 | |||||| | ||| | | || || ||||||||| | |||| Sbjct 17867022 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGTTAGCTTGTTACATGGGTCGTGAGTG 17867081 Query 171010 GGAACTATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGT 171069 |||||| | | | || || ||| | |||||||| ||| |||| ||| | |||| Sbjct 17867082 GGAACTTAATTTCCGTCTGGGTATGCGTCCTTGGATTGTTGTTGCATGTTCAACTACTGT 17867141 Query 171070 ATCTGCAGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGG 171129 | ||||| ||| || ||| | | || ||| ||||||| || || |||||||| Sbjct 17867142 TGCAGCAGCGACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGG 17867201 Query 171130 TATGCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAA 171189 |||||| ||||| ||||| ||||| |||||||||||| | || ||||| || || ||||| Sbjct 17867202 TATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAA 17867261 Query 171190 CATACTAAT 171198 ||| || || Sbjct 17867262 CATCCTTAT 17867270 Score = 107 bits (118), Expect = 2e-18 Identities = 200/291 (69%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 172543 TTGGTATAGCATTTTCAAACAAAAGATTCTTACACTTCCTT-ATGTTGTTCGTACCTGTC 172601 |||| | || ||||| || ||| | | ||||| || || ||||| || ||||| || Sbjct 16615015 TTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTTTTTTATGTTATTTGTACCAGTA 16614956 Query 172602 ATGGGTATGTGGACATCATCTATAGGTATCGTAGGTCTTGCACTTAACCTCAGAGCATAC 172661 | ||| | |||| | | || | || || || || || ||||| | || || Sbjct 16614955 ACCGGTTTATGGATGAGTGTTCTTGGAGTAGTTGGCCTAGCCCTGAACCTACGTGCTTAT 16614896 Query 172662 GACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACT 172721 ||||| || ||||| || || | ||||||||||| || || ||||| || |||||||| Sbjct 16614895 GACTTCGTTTCTCAGGAAATCCGTGCAGCAGAAGATCCTGAATTTGAGACTTTCTACAC- 16614837 Query 172722 AAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGATGTCATCTGTCGATCAACCCCAT 172781 || || |||||| | || | ||||| | || |||||| | ||| ||||| || ||| Sbjct 16614836 AAAAAAATTCTTTTAAACAAGGGTATTCGTGCTTGGATGGCGGCTGAAGATCAGCCTCAT 16614777 Query 172782 GAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCACGAGGCAACGCACTATAA 172832 || ||| || | ||||| || || || | || | || ||||| || ||| Sbjct 16614776 GAAAACCTTATATTCCCTGAGGAGGTTCTACCCTGTGGAAACGCTCTTTAA 16614726 >seq1074 Length=10062 Score = 217 bits (240), Expect = 2e-51 Identities = 511/769 (66%), Gaps = 27/769 (4%) Strand=Plus/Minus Query 172067 TCAATTAGGTGGACTATGGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTT 172126 ||||||||| || || ||| | ||| | || || || || | || ||| | ||||| || Sbjct 4528 TCAATTAGGCGGTCT-TGGGATTTTTTTGCTTTTCACGGTGCTTTCGGAAT-ATAGGGTT 4471 Query 172127 CATGCTTAGACAGTTTGAGATTGCAGGACTTGTTGGGATACGTCCTTACAACGCACTAG- 172185 || | | | || ||||| |||| | ||||| | || ||||| || ||| ||| Sbjct 4470 CAAGTTACGTCAATTTGAACTTGCTCGGTTTGTTCAATTGCGACCTTATAATGCAATAGT 4411 Query 172186 --CATTCTCAGCAGTTATTGCAGTATTCACGAGCATCTTTCTAATATATCCATTAGGTCA 172243 ||||||| || ||||| || || | || || || |||||| ||||||| Sbjct 4410 AGCATTCTCTGCTCC-ATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCA 4352 Query 172244 GCATAGTTGGTTCTTCGCACCTTCATTTGGTGTCGCAGCAATCTTTCGTTATATTTTATT 172303 | | |||||||||| || ||| |||||||| || || || ||||| | || | || Sbjct 4351 GTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTTT 4292 Query 172304 CATACAGGGTTTCCACAATATAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTAT 172363 | || || || || ||| || | || || |||||||||||||| || || ||| | Sbjct 4291 TTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGT 4232 Query 172364 ACTTGGTGGAGCATTACTATGTGCCATACATGGTGCAACAGTACAGAACACATTGTATGA 172423 | | || | || | ||||| ||||| ||||| || || ||| | || || || | ||| Sbjct 4231 ATTGGGCGCTGCTCTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGA 4172 Query 172424 AGACACATCACAATACACTGAAGGTAAGATTCAATCTACAACTTTCAGAGCATTCGATCC 172483 ||| || | | | | ||| | || ||| | || || | || Sbjct 4171 AGA---------------TG--GTGATGGTGCAAAC----ACATTCCGTGCTTTTAACCC 4133 Query 172484 TACACAGGAAGAAGAAACTTATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATT 172543 || || | |||||||| ||| ||| | || |||||| | || ||||| || || || Sbjct 4132 AACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTT 4073 Query 172544 TGGTATAGCATTTTCAAACAAAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCAT 172603 ||| | || ||||| || ||| | | ||||| ||| ||||||| || ||||| || | Sbjct 4072 TGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAAC 4013 Query 172604 GGGTATGTGGACATCATCTATAGGTATCGTAGGTCTTGCACTTAACCTCAGAGCATACGA 172663 ||| | |||| || | || | || || || || || ||||| | || || || Sbjct 4012 CGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGA 3953 Query 172664 CTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAA 172723 ||| || || || || || | ||||| ||||| || || ||||| || |||||||| || Sbjct 3952 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAA 3893 Query 172724 GAACATTCTTCTTAATGAAGGTATGAGAGCATGGATGTCATCTGTCGATCAACCCCATGA 172783 || |||||| | || || ||||| | || |||||| | || ||||| || ||||| Sbjct 3892 AAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 3833 Query 172784 GAACTTTGTGTTCCCAGAAGAAGTCTTGCCACGAGGCAACGCACTATAA 172832 ||| || | ||||| || || || | || || || ||||| || ||| Sbjct 3832 AAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 3784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570258834552720