Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1030 93.3 1e-13 >seq1030 Length=25649276 Score = 93.3 bits (102), Expect = 1e-13 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 22483 TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTT 22542 |||||||| | | || || |||||| || || || |||||||| || || ||| Sbjct 1351956 TTCGCGGAGAGATTAATCGCGTTTGCTTGCGTGGAGGGGATTTTCTTCTCAGGGAGTTTT 1352015 Query 22543 TGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAG 22602 || || || |||||||| ||||| || | | |||||||| |||| || ||||| ||| Sbjct 1352016 TGCGCGATATTTTGGCTCAAAAAGCGCGGGTTAATGCCGGGATTAACATTCTCAAACGAG 1352075 Query 22603 TTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 || || |||||||||||||| || |||||| ||||| Sbjct 1352076 TTGATCTCGCGAGATGAGGGTCTCCACTGCGATTTCGCGTG 1352116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303330254493236