Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq1113 517 1e-141 seq244 517 1e-141 seq993 513 2e-140 seq1320 511 5e-140 seq1136 470 2e-127 seq1074 403 2e-107 seq965 262 4e-65 seq1282 87.8 2e-12 >seq1113 Length=8127 Score = 517 bits (572), Expect = 1e-141 Identities = 727/1017 (71%), Gaps = 8/1017 (1%) Strand=Plus/Plus Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359 |||||| | ||||||||||| | | ||||| || || ||||| || |||||||| Sbjct 1825 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 1884 Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419 || | || ||||| ||| ||| | || | || || ||| | || || || || ||| Sbjct 1885 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 1944 Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACC--TTG--AGGGTGCTAATTT 167475 || || ||||||||||| || || || |||| | ||| ||| ||| | || Sbjct 1945 GTAACTTCATGGTATACCCATGGATTAGCC---AGTTCCTATTTGGAAGGCTGCAACTTC 2001 Query 167476 TCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTG 167535 | | || || ||||| || ||||||||| | | | | |||||| | | |||| || Sbjct 2002 T-TAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATG 2060 Query 167536 GGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTT 167595 ||||||||| | || || ||||| | | ||||| || | || || || ||| |||| Sbjct 2061 GGGTCCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTT 2120 Query 167596 TGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAG 167655 ||| || |||||||| || || | || ||||| || ||| | || |||||||| | Sbjct 2121 TGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 2180 Query 167656 TAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTT 167715 | | || | || ||||| ||||| || || || |||| ||| |||||||| || Sbjct 2181 TCGCTCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTT 2240 Query 167716 TGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTT 167775 ||| ||||| || || || ||||| || || ||||| ||||||||||||| || || Sbjct 2241 TGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTT 2300 Query 167776 TGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCT 167835 |||||| || ||||||||| ||||| | || || | || || || ||||| ||||| | Sbjct 2301 TGGTGTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATT 2360 Query 167836 CAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAAT 167895 ||||| || ||||||||||||||||| ||| | | |||| ||| |||| | || || Sbjct 2361 GAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCCAT 2420 Query 167896 CCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAA 167955 ||||| | ||| ||||| |||||| | | |||||||||||| |||||||| ||| Sbjct 2421 TCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCG 2480 Query 167956 AGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTG 168015 || ||| | | || || | || ||||| ||||| |||||||| |||||||| || || Sbjct 2481 TGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTG 2540 Query 168016 GTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTT 168075 ||||||||| ||||| ||||||| |||||| |||||||| || ||||||||| | || Sbjct 2541 GTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 2600 Query 168076 CGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCT 168135 || || || | || | |||| ||| || |||| | |||| || || || || || Sbjct 2601 TGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCT 2660 Query 168136 TCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAAC 168195 |||||||||||||| || || |||||| | | ||||| || ||||| || ||||| || Sbjct 2661 ACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGAC 2720 Query 168196 TTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGA 168255 |||||| || ||||| || || | || || || | ||||| |||||||| | ||| Sbjct 2721 TTTCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGA 2780 Query 168256 CCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 || || ||||||||| || ||||||| || || || | || | || |||||||| Sbjct 2781 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 2837 >seq244 Length=4089 Score = 517 bits (572), Expect = 1e-141 Identities = 727/1017 (71%), Gaps = 8/1017 (1%) Strand=Plus/Minus Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359 |||||| | ||||||||||| | | ||||| || || ||||| || |||||||| Sbjct 3469 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 3410 Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419 || | || ||||| ||| ||| | || | || || ||| | || || || || ||| Sbjct 3409 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 3350 Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACC--TTG--AGGGTGCTAATTT 167475 || || ||||||||||| || || || |||| | ||| ||| ||| | || Sbjct 3349 GTAACTTCATGGTATACCCATGGATTAGCC---AGTTCCTATTTGGAAGGCTGCAACTTC 3293 Query 167476 TCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTG 167535 | | || || ||||| || ||||||||| | | | | |||||| | | |||| || Sbjct 3292 T-TAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATG 3234 Query 167536 GGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTT 167595 ||||||||| | || || ||||| | | ||||| || | || || || ||| |||| Sbjct 3233 GGGTCCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTT 3174 Query 167596 TGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAG 167655 ||| || |||||||| || || | || ||||| || ||| | || |||||||| | Sbjct 3173 TGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 3114 Query 167656 TAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTT 167715 | | || | || ||||| ||||| || || || |||| ||| |||||||| || Sbjct 3113 TCGCTCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTT 3054 Query 167716 TGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTT 167775 ||| ||||| || || || ||||| || || ||||| ||||||||||||| || || Sbjct 3053 TGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTT 2994 Query 167776 TGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCT 167835 |||||| || ||||||||| ||||| | || || | || || || ||||| ||||| | Sbjct 2993 TGGTGTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATT 2934 Query 167836 CAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAAT 167895 ||||| || ||||||||||||||||| ||| | | |||| ||| |||| | || || Sbjct 2933 GAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCCAT 2874 Query 167896 CCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAA 167955 ||||| | ||| ||||| |||||| | | |||||||||||| |||||||| ||| Sbjct 2873 TCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCG 2814 Query 167956 AGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTG 168015 || ||| | | || || | || ||||| ||||| |||||||| |||||||| || || Sbjct 2813 TGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTG 2754 Query 168016 GTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTT 168075 ||||||||| ||||| ||||||| |||||| |||||||| || ||||||||| | || Sbjct 2753 GTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 2694 Query 168076 CGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCT 168135 || || || | || | |||| ||| || |||| | |||| || || || || || Sbjct 2693 TGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCT 2634 Query 168136 TCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAAC 168195 |||||||||||||| || || |||||| | | ||||| || ||||| || ||||| || Sbjct 2633 ACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGAC 2574 Query 168196 TTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGA 168255 |||||| || ||||| || || | || || || | ||||| |||||||| | ||| Sbjct 2573 TTTCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGA 2514 Query 168256 CCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 || || ||||||||| || ||||||| || || || | || | || |||||||| Sbjct 2513 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 2457 >seq993 Length=11053 Score = 513 bits (568), Expect = 2e-140 Identities = 727/1017 (71%), Gaps = 9/1017 (1%) Strand=Plus/Plus Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359 |||||| | ||||||||||| | | ||||| || || ||||| || |||||||| Sbjct 8544 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 8603 Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419 || | || ||||| ||| ||| | || | || || ||| | || || || || ||| Sbjct 8604 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 8663 Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACC--TTG--AGGGTGCTAATTT 167475 || || ||||||||||| || || || |||| | ||| ||| ||| | || Sbjct 8664 GTAACTTCATGGTATACCCATGGATTAGCC---AGTTCCTATTTGGAAGGCTGCAACTTC 8720 Query 167476 TCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTG 167535 | | || || ||||| || ||||||||| | | | | |||||| | | |||| || Sbjct 8721 T-TAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATG 8779 Query 167536 GGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTT 167595 ||||||||| | || || ||||| | | ||||| || | || || || ||| |||| Sbjct 8780 GGGTCCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTT 8839 Query 167596 TGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAG 167655 ||| || |||||||| || || | || ||||| || ||| | || |||||||| | Sbjct 8840 TGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 8899 Query 167656 TAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTT 167715 | | || | || ||||| ||||| || || || |||| ||| |||||||| || Sbjct 8900 TCGCTCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTT 8959 Query 167716 TGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTT 167775 ||| ||||| || || || ||||| || || ||||| ||||||||||||| || || Sbjct 8960 TGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTT 9019 Query 167776 TGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCT 167835 |||||| || ||||||||| ||||| | || || | || || || ||||| ||||| | Sbjct 9020 TGGTGTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATT 9079 Query 167836 CAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAAT 167895 ||||| || ||||||||||||||||| ||| | | |||| ||| |||| | || || Sbjct 9080 GAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCCAT 9139 Query 167896 CCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAA 167955 ||||| | ||| ||||| |||||| | | |||||||||||| |||||||| ||| Sbjct 9140 TCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCG 9199 Query 167956 AGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTG 168015 || ||| | | || || | || ||||| ||||| |||||||| |||||||| || || Sbjct 9200 TGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTG 9259 Query 168016 GTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTT 168075 ||||||||| ||||| ||||||| |||||| |||||||| || ||||||||| | || Sbjct 9260 GTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 9319 Query 168076 CGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCT 168135 || || || | || | |||| ||| || |||| | |||| || || || || || Sbjct 9320 TGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCT 9379 Query 168136 TCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAAC 168195 |||||||||||||| || || |||||| | | ||||| || ||||| || ||||| || Sbjct 9380 ACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGAC 9439 Query 168196 TTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGA 168255 |||||| || ||||| || || | || || || | ||||| |||||||| | ||| Sbjct 9440 TTTCTACACAAAAAATATTCT-TTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGA 9498 Query 168256 CCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 || || ||||||||| || ||||||| || || || | || | || |||||||| Sbjct 9499 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 9555 >seq1320 Length=5450 Score = 511 bits (566), Expect = 5e-140 Identities = 726/1017 (71%), Gaps = 8/1017 (1%) Strand=Plus/Plus Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359 |||||| | ||||||||||| | | ||||| || || ||||| || |||||||| Sbjct 4410 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 4469 Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419 || | || ||||| ||| ||| | || | || || ||| | || || || || ||| Sbjct 4470 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 4529 Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACC--TTG--AGGGTGCTAATTT 167475 || || ||||||||||| || || || |||| | ||| ||| ||| | || Sbjct 4530 GTAACTTCATGGTATACCCATGGATTAGCC---AGTTCCTATTTGGAAGGCTGCAACTTC 4586 Query 167476 TCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTG 167535 | | || || ||||| || ||||||||| | | | | |||||| | | |||| || Sbjct 4587 T-TAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATG 4645 Query 167536 GGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTT 167595 ||||||||| | || || ||||| | | ||||| || | || || || ||| |||| Sbjct 4646 GGGTCCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTT 4705 Query 167596 TGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAG 167655 ||| || |||||||| || || | || ||||| || ||| | || |||||||| | Sbjct 4706 TGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 4765 Query 167656 TAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTT 167715 | | || | || ||||| ||||| || || || |||| ||| |||||||| || Sbjct 4766 TCGCTCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTT 4825 Query 167716 TGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTT 167775 ||| ||||| || || || ||||| || || ||||| ||||||||||||| || || Sbjct 4826 TGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTT 4885 Query 167776 TGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCT 167835 |||||| || ||||||||| ||||| | || || | || || || ||||| ||||| | Sbjct 4886 TGGTGTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATT 4945 Query 167836 CAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAAT 167895 ||||| || ||||||||||||||||| ||| | | |||| ||| |||| | || || Sbjct 4946 GAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCCAT 5005 Query 167896 CCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAA 167955 ||||| | ||| ||||| |||||| | | |||||||||||| |||||||| ||| Sbjct 5006 TCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCG 5065 Query 167956 AGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTG 168015 || ||| | | || || | || ||||| ||||| |||||||| |||||||| || || Sbjct 5066 TGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTG 5125 Query 168016 GTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTT 168075 ||||||||| ||||| ||||||| |||||| |||||||| || ||||||||| | || Sbjct 5126 GTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 5185 Query 168076 CGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCT 168135 || || || | || | |||| ||| || |||| | |||| || || || || || Sbjct 5186 TGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCT 5245 Query 168136 TCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAAC 168195 |||||||||||||| || || |||||| | | ||||| || ||||| || ||||| || Sbjct 5246 ACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGAC 5305 Query 168196 TTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGA 168255 |||||| || ||||| || || | || || || | ||||| |||||||| | ||| Sbjct 5306 TTTCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGA 5365 Query 168256 CCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 || || ||||||||| || ||||||| || || | | || | || |||||||| Sbjct 5366 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGATCTACCCCGTGGAAACGCTCT 5422 >seq1136 Length=8532 Score = 470 bits (520), Expect = 2e-127 Identities = 604/833 (73%), Gaps = 0/833 (0%) Strand=Plus/Minus Query 167480 ACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 167539 || || ||||| || ||||||||| | | | | |||||| | | |||| |||||| Sbjct 3652 ACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGT 3593 Query 167540 CCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTTTGTG 167599 ||||| | || || ||||| | | ||||| || | || || || ||| ||||||| Sbjct 3592 CCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTT 3533 Query 167600 GCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAGTAGA 167659 || |||||||| || || | || ||||| || ||| | || |||||||| | | | Sbjct 3532 GCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGC 3473 Query 167660 CTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTTTGTG 167719 || | || ||||| ||||| || || || |||| ||| |||||||| ||||| Sbjct 3472 TCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTTGTT 3413 Query 167720 TCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTTTGGT 167779 ||||| || || || ||||| || || ||||| ||||||||||||| || |||||| Sbjct 3412 TCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 3353 Query 167780 GTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCTCAAC 167839 || || ||||||||| ||||| | || || | || || || ||||| ||||| | ||| Sbjct 3352 GTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 3293 Query 167840 CCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAATCCAT 167899 || || ||||||||||||||||| ||| | | |||| ||| |||| | || || ||| Sbjct 3292 CCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCCATTCAT 3233 Query 167900 GGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAAAGCA 167959 || | ||| ||||| |||||| | | |||||||||||| |||||||| ||| || Sbjct 3232 GGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCGTGCT 3173 Query 167960 TTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGGTCT 168019 ||| | | || || | || ||||| ||||| |||||||| |||||||| || |||||| Sbjct 3172 TTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTCT 3113 Query 168020 CAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTCGTT 168079 ||||| ||||| ||||||| |||||| |||||||| || ||||||||| | || || Sbjct 3112 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 3053 Query 168080 CCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTTCGT 168139 || || | || | |||| ||| || |||| | |||| || || || || || ||| Sbjct 3052 CCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGT 2993 Query 168140 GCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAACTTTC 168199 ||||||||||| || || |||||| | | ||||| || ||||| || ||||| |||||| Sbjct 2992 GCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTC 2933 Query 168200 TATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCAA 168259 || || ||||| || || | || || || | ||||| |||||||| | ||| || Sbjct 2932 TACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAG 2873 Query 168260 CCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 || ||||||||| || ||||||| || || || | || | || |||||||| Sbjct 2872 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 2820 >seq1074 Length=10062 Score = 403 bits (446), Expect = 2e-107 Identities = 477/644 (74%), Gaps = 4/644 (1%) Strand=Plus/Minus Query 167672 CGTCCTTACAATGCGATTG---CTTTTTCTGGTCCGATTGCTGTCTTTGTGTCTGTTTTT 167728 || ||||| ||||| || | | || |||| ||| |||||||| ||||| ||||| || Sbjct 4430 CGACCTTATAATGCAATAGTAGCATTCTCTGCTCC-ATTGCTGTTTTTGTTTCTGTATTC 4372 Query 167729 CTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTTTGGTGTTGCAGCG 167788 || || ||||| || || ||||| ||||||||||||| || |||||||| || ||| Sbjct 4371 CTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCG 4312 Query 167789 ATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCTCAACCCTTTCCAT 167848 |||||| ||||| | || || | || || || ||||| ||||| | ||||| || ||| Sbjct 4311 ATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCAT 4252 Query 167849 ATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAATCCATGGTGTTACA 167908 |||||||||||||| ||| | | |||| ||| |||| | || || ||||| | ||| Sbjct 4251 ATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCCATTCATGGCGCTACC 4192 Query 167909 GTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAAAGCATTTGATACG 167968 ||||| |||||| | | |||||||||||| |||||||| ||| || ||| | | Sbjct 4191 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCA 4132 Query 167969 ACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGGTCTCAAATTTTT 168028 || || | || ||||| ||||| |||||||| |||||||| || ||||||||||| ||| Sbjct 4131 ACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTT 4072 Query 168029 GGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTCGTTCCTGTCATG 168088 || ||||||| |||||| |||||||| || ||||||||| | || || || || | Sbjct 4071 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 4012 Query 168089 GGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTTCGTGCTTATGAC 168148 || | |||| ||| || |||| | |||| || || || || || |||||||||||| Sbjct 4011 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGAC 3952 Query 168149 TTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAACTTTCTATACGAAA 168208 || || || |||||| | | ||||| || ||||| || ||||| |||||||| || ||| Sbjct 3951 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAA 3892 Query 168209 AACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCAACCACATGAA 168268 || || || | || || || | ||||| |||||||| | ||| || || |||||| Sbjct 3891 AATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 3832 Query 168269 AACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 ||| || ||||||| || || || | || | || |||||||| Sbjct 3831 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 3788 >seq965 Length=51047765 Score = 262 bits (290), Expect = 4e-65 Identities = 364/507 (72%), Gaps = 2/507 (0%) Strand=Plus/Plus Query 166081 AACCGTCTTTATGTTGGTTGGTTTGGCACACTGATGATTCCAACTCTGTTGGCAGCAACC 166140 ||| | ||||| ||||||||||||| ||||||| || ||| | ||| | |||| | Sbjct 18211504 AACTGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAA-C 18211562 Query 166141 ATCTGT-TTCATCGTCGCTTTCGTAGCGGCACCTCCTGTCGATATCGATGGGATCCGTGA 166199 ||||| || || |||| || | || || ||||| || ||||| || || || ||||| Sbjct 18211563 TTCTGTATTTATTATCGCCTTTATTGCTGCTCCTCCAGTAGATATTGACGGTATTCGTGA 18211622 Query 166200 GCCCGTAGCAGGCTCTCTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCCTC 166259 || | | || |||||| | ||||| || || || || ||| | || || | || | Sbjct 18211623 ACCTGCTTCTGGATCTCTACTTTATGGAAATAATATTATTTCTAGCGCGATTATTCCTAC 18211682 Query 166260 CTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCAGCATCACTTGATGAATG 166319 || | || || ||| | || || || || || |||||||| ||||| |||||||||| Sbjct 18211683 TTCTACAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATG 18211742 Query 166320 GCTTTATAACGGTGGTCCTTTCCAGCTCGTAGTCTTCCACTTCCTCATCGGCATCTATGC 166379 | | || || || ||||||| |||| | || | |||||| | || || | | Sbjct 18211743 GTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCGTAATTGGTGTAGCTTG 18211802 Query 166380 CTACATGGGTCGTGAATGGGAATTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGT 166439 |||||||||||||| |||||| | || ||| || |||||||||||||||||| || Sbjct 18211803 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTAGGTATGCGTCCTTGGATTGCTGT 18211862 Query 166440 AGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCA 166499 ||||| | | |||||||||||||| | || || ||| || |||| || ||||||| Sbjct 18211863 TGCATATTTAACTCCTGTTGCAGCAGCGACTGCTGTTTTCTTGATCTACCCAATCGGTCA 18211922 Query 166500 AGGTTCTTTCTCTGACGCAATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGT 166559 ||| ||| ||||| | ||||| || || ||| ||| || ||||||| |||| |||| Sbjct 18211923 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 18211982 Query 166560 CTTCCAAGCAGAGCACAACATCCTCAT 166586 ||||| || |||||||||||||| || Sbjct 18211983 ATTCCAGGCTGAGCACAACATCCTTAT 18212009 Score = 219 bits (242), Expect = 5e-52 Identities = 366/525 (70%), Gaps = 22/525 (4%) Strand=Plus/Plus Query 166081 AACCGTCTTTATGTTGGTTGGTTTGGCACACTGATGATTCCAACTCTGTTGGCAGCAACC 166140 ||||| ||||| ||||||||||||| ||||||| || ||| | ||| | ||||| Sbjct 17866749 AACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 17866808 Query 166141 ATCTGT-TTCATCGTCGCTTTCGTAGCGGCACCTCCTGTCGATATCGATGGGATCCGTGA 166199 | ||| || || | || || | || || ||||| | ||||| || || || | ||| Sbjct 17866809 -TATGTATTTATTATAGCCTTAATTGCTGCTCCTCCAATAGATATTGACGGTATTCATGA 17866867 Query 166200 GCCCGTAGCAGGCTCTCTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCC--C 166257 || || | || |||||| | ||||| || || || || | |||||| || | || | Sbjct 17866868 ACCTGTTTCTGGATCTCTACTTTATGGAAATAATATTATTTTTGGTGCGATTATTCCTAC 17866927 Query 166258 TCCTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCAGCATCACTTGATGAA 166317 | || || || || ||| | || || || || || |||||||| ||||| |||||||| Sbjct 17866928 TTCTGCA--GCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAA 17866985 Query 166318 TGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAGTCTTCCACTTCCTCATCGGCAT--CT 166375 ||| | || || || |||||| |||| | || | |||||| | | || | || Sbjct 17866986 TGGTTATACAATGGCAGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCT 17867045 Query 166376 ------ATGCCTA--------CATGGGTCGTGAATGGGAATTGTCTTACCGCCTCGGTAT 166421 ||| || |||||||||||| |||||| | || ||| || ||||| Sbjct 17867046 TGTTACATGGTTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAATTTCCGTCTGGGTAT 17867105 Query 166422 GCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCT 166481 ||||||||||||| || |||| || | ||||||||||||| | || || ||| | Sbjct 17867106 GCGTCCTTGGATTGTTGTTGCATGTTCAACTACTGTTGCAGCAGCGACTGCTGTTTTCTT 17867165 Query 166482 GGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTATCAGTGGCAC 166541 | |||| || |||||||||| ||| ||||| | ||||| || || ||| ||| || Sbjct 17867166 GATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTAC 17867225 Query 166542 CTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCAT 166586 ||||||| |||| |||| ||||| || |||||||||||||| || Sbjct 17867226 TTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTAT 17867270 Score = 150 bits (166), Expect = 2e-31 Identities = 207/287 (72%), Gaps = 2/287 (1%) Strand=Plus/Minus Query 168027 TTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTT-ATGCTTTTCGTTCCTGTC 168085 |||| ||||||| |||||| |||||||| || || ||| ||| | || || || || Sbjct 16615015 TTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTTTTTTATGTTATTTGTACCAGTA 16614956 Query 168086 ATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTTCGTGCTTAT 168145 | || | |||| ||| | |||| | | || || || || || || ||||||||| Sbjct 16614955 ACCGGTTTATGGATGAGTGTTCTTGGAGTAGTTGGCCTAGCCCTGAACCTACGTGCTTAT 16614896 Query 168146 GACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAACTTTCTATACG 168205 ||||| || ||||||||| | | |||||||| ||||| || ||||| |||||||| || Sbjct 16614895 GACTTCGTTTCTCAGGAAATCCGTGCAGCAGAAGATCCTGAATTTGAGACTTTCTACAC- 16614837 Query 168206 AAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCAACCACAT 168265 ||||| || || | || | || | ||||| |||||||| | | ||| || || ||| Sbjct 16614836 AAAAAAATTCTTTTAAACAAGGGTATTCGTGCTTGGATGGCGGCTGAAGATCAGCCTCAT 16614777 Query 168266 GAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 |||||| || ||||||| || || || | || | || |||||||| Sbjct 16614776 GAAAACCTTATATTCCCTGAGGAGGTTCTACCCTGTGGAAACGCTCT 16614730 >seq1282 Length=25111302 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 167754 GTTGGTTCTTTGCACCGTCGTTT-GGTGTTGCAGCGATATTTAGATTCCTACTATTCCTA 167812 |||| ||||||| || |||||| ||||| | |||||||| ||| | || || | Sbjct 6824501 GTTGATTCTTTGAGCC-TCGTTTTGGTGTAGTGACGATATTTCTGTTCATCCTTTTTTTC 6824559 Query 167813 CAGGGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTA 167872 || || | |||| | ||| | || || || ||||||||||||||||||||| | || Sbjct 6824560 CAAGGGTCTTATAAGTAGACATTAAATCCCTTTCATATGATGGGAGTTGCTGGTGTATTA 6824619 Query 167873 GGCGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTCTGTATGAAGAT 167932 || | || ||| | ||| || ||||| ||| |||| |||||| | | ||||||| Sbjct 6824620 GGTGCTGTTCAGCTATGTGCTATTCATGGCACTACTATAGAAAATACTTTATTTGAAGAT 6824679 Query 167933 GGTGA 167937 ||||| Sbjct 6824680 GGTGA 6824684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567222087620800