Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1282 82.4 7e-11 >seq1282 Length=25111302 Score = 82.4 bits (90), Expect = 7e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 20239 ACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAAC 20298 |||| ||||||||||| ||| | || ||||||| ||| ||||||||||| || || Sbjct 5666025 ACCACAAACATGAGCAATCATGCATGTCAAGAGGGCATATGAAGCAATGTTAAACGGCAC 5666084 Query 20299 TCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 |||| ||||| || | || | |||||||| ||||| || | ||| || | ||| | Sbjct 5666085 ACCCAGGCCCATATCAGCAGAGCGCTGATACATTTGACATGATAACTCCCCATTAGCCAT 5666144 Query 20359 ATAAAATTGACATAACAA 20376 ||| || || || ||||| Sbjct 5666145 ATAGAACTGCCAAAACAA 5666162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441365087010320