Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1165 159 8e-34 seq1 113 1e-19 >seq1165 Length=25613772 Score = 159 bits (176), Expect = 8e-34 Identities = 178/235 (76%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| || || || ||||| | ||| |||||||||||| || || | Sbjct 10928346 CATG-CCACCACGGAGCCTGAGGACAAGATGCAAGGTGGATTCTTTTTGGATGTTGTAAT 10928288 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | ||||| |||||||| ||||| ||||| ||||||||||| | ||| || Sbjct 10928287 CGGCCAAGGTGCGGCCGTCTTCCAATTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCGG 10928228 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418 |||||||| || || || ||||| || || |||||||| || || | ||| ||| Sbjct 10928227 GAGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTC- 10928169 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || |||||||||||||| || || |||||||| |||||||| Sbjct 10928168 --TCGACCTCGAGGGTAATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 10928116 Score = 156 bits (172), Expect = 1e-32 Identities = 177/235 (75%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| || || || ||||| | ||| |||||||||||| || || | Sbjct 10868233 CATG-CCACCACGGAGCCTGAGGACAAGATGCAAGGTGGATTCTTTTTGGATGTTGTAAT 10868175 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | || || |||||||| | ||| ||||| ||||||||||| | ||| || Sbjct 10868174 CGGCCAAGGTCCGGCCGTCTTCGAGTTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCGG 10868115 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418 |||||||| || || || ||||| || || |||||||| || || | ||| ||| Sbjct 10868114 GAGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTC- 10868056 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || ||||||||||||||||| || |||||||| |||||||| Sbjct 10868055 --TCGACCTCGAGGGTAATCGTCTTCCCGGTCAGGGTTTTGACGAAGATCTGCAT 10868003 Score = 156 bits (172), Expect = 1e-32 Identities = 177/235 (75%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | ||| || ||||||| ||| ||| ||||||||||| || | Sbjct 12024161 CATG-CCTCCACGGAGACGAAGCACCAGATGAAGCGTCGATTCCTTTTGGATATTGTAAT 12024103 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | ||||| |||||||| | |||||||| ||||||||||||||||| || Sbjct 12024102 CGGCCAAGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCG 12024043 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 ||||||||||| || || ||||| || || || ||||| || || | || |||| Sbjct 12024042 GAGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTC- 12023984 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| || || ||||| ||||| || || || ||||| |||||||| Sbjct 12023983 --TCGACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 12023931 Score = 145 bits (160), Expect = 2e-29 Identities = 160/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || || || | |||| ||| || ||||| ||||| ||||| || ||||| ||||| || Sbjct 10317875 ACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGCCAGGGTGCGGCCGTCCTCC 10317816 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | || || || |||||||| || | ||| || ||||| ||||| || |||||| Sbjct 10317815 AGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGG 10317756 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTC 288441 || ||||| |||||||| || || | ||| ||| || || || || ||||||||| Sbjct 10317755 ATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGCTC---TCCACCTCCAGGGTGATCGTC 10317699 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||||||||||||||| |||||||| Sbjct 10317698 TTCCCGGTCAGAGTCTTGACGAAGATCTGCAT 10317667 Score = 138 bits (152), Expect = 3e-27 Identities = 173/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| || || ||||| || | ||| || || ||||| || || | Sbjct 10928118 CATG-CCGCCACGGAGCCTGAGCACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAAT 10928060 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | ||||| || ||||| | ||| ||||| ||||||||||||||||| ||| Sbjct 10928059 CGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCG 10928000 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 ||||| || || || |||||||| || || || ||||| || || | || |||| Sbjct 10927999 GAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCAGAGCTC- 10927941 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| |||||||| || ||||| || || || ||||| |||||||| Sbjct 10927940 --TCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 10927888 Score = 138 bits (152), Expect = 3e-27 Identities = 173/234 (74%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | || || || |||| || ||||| ||||| ||||||| Sbjct 10928574 CATG-CCTCCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAGT 10928516 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || | |||||| |||||||| |||||||| || || ||||||| | |||||| Sbjct 10928515 CAGCCAACGTGCGGCCGTCTTCCAATTGTTTCCCGGCAAAGATCAATCTTTGTTGATCTG 10928456 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||||| ||||| || || ||||| || || || || || || || | ||| | | | Sbjct 10928455 GTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTATC--TGAACT 10928398 Query 288422 CT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| |||||||||||||| || || || |||||||| |||||||| Sbjct 10928397 CTCCACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 10928344 Score = 136 bits (150), Expect = 9e-27 Identities = 147/193 (76%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||||||||| || | ||| || |||||||| ||||||||||| || ||| Sbjct 10868421 TCTTTCTGGATATTATAGTCAGCCAACGTACGGCCGTCTTCCAATTGTTTTCCAGCAAAG 10868362 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | |||||| |||||| || || || || ||||| || || || || || Sbjct 10868361 ATCAATCTTTGTTGATCTGGTGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATTA 10868302 Query 288403 TCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 || || | ||| | | ||| || ||||| |||||||||||||| || || || |||| Sbjct 10868301 TCAATCGTATC--TGAACTCTCCACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTTTTGA 10868244 Query 288461 CGAATATCTGCAT 288473 |||| |||||||| Sbjct 10868243 CGAAGATCTGCAT 10868231 Score = 134 bits (148), Expect = 3e-26 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || || || || ||||| | ||| ||||||||| || || || ||||| Sbjct 10936124 TCCACCACGAAGCCTGAGGACAAGATGCAAAGTGGATTCTTTTTGAATGTTGTAATCGGC 10936065 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | ||||| |||||||| | ||| || || || ||||| |||||||| || || Sbjct 10936064 CAAAGTGCGGCCGTCTTCGAGTTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCCGGCGG 10936005 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422 ||||| || || |||||||| || || || ||||| || || | ||| ||| || Sbjct 10936004 AATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTC---TC 10935948 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| ||||| || || || || ||||||||||| Sbjct 10935947 CACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTTTTCACAAATATCTGCAT 10935897 Score = 132 bits (146), Expect = 1e-25 Identities = 172/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| || || ||||| || | ||| || || ||||| || || | Sbjct 10868005 CATG-CCGCCACGGAGCCTGAGCACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAAT 10867947 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | ||||| || ||||| | ||| ||||| ||||||||||||||||| ||| Sbjct 10867946 CGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCG 10867887 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 ||||| || || || | |||||| || || || ||||| || || | || |||| Sbjct 10867886 GAGGGATCCCCTCCTTGTGCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCAGAGCTC- 10867828 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| |||||||| || ||||| || || || ||||| |||||||| Sbjct 10867827 --TCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 10867775 Score = 132 bits (146), Expect = 1e-25 Identities = 158/213 (74%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || ||||||| || || || || || || || || || ||||| | ||| || || Sbjct 10936333 ACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGCAAGCGTCCTTCCATCCTCC 10936274 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | || || || || |||||||| ||||| ||| | |||||| ||||||||||||||| Sbjct 10936273 AGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCTTCTTTATCCTGG 10936214 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || ||||| || || | || |||| || ||||| || ||||||||| Sbjct 10936213 ATTTTTGCCTTGACGTTGTCAATGGTGTCAGAGCTC---TCGACTTCCAGAGTGATCGTC 10936157 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||| || |||||||| ||||||||| Sbjct 10936156 TTTCCCGTCAGGGTTTTGACGAAGATCTGCATT 10936124 Score = 129 bits (142), Expect = 1e-24 Identities = 171/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | ||| ||||| |||| || ||| || |||||||| || | Sbjct 12024389 CATGCCC-CCACGGAGACGAAGCACGAGGTGAAGAGTTGATTCCTTCTGGATATTGTAAT 12024331 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | ||||| ||||| || | ||| ||||| ||||||||||| | ||| || Sbjct 12024330 CGGCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCG 12024271 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 || || ||||| || |||||||| || || || ||||| || || | || |||| Sbjct 12024270 GCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTC- 12024212 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| || || ||||| ||||| || || || ||||| |||||||| Sbjct 12024211 --TCAACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 12024159 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || |||||||||| || || || |||||||| || || || Sbjct 10816896 CCACCACGGAGCCTGAGGACGAGATGAAGGGTTGACTCCTTCTGGATATTGTAATCAGCC 10816837 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| |||||||| | ||| || || || |||||||| | ||| || ||| Sbjct 10816836 AAGGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGG 10816777 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 ||||| || || || || || ||||| || ||||| || || | || |||| || Sbjct 10816776 ATTCCCTCCTTGTCTTGAATCTTCGCCTTAACGTTATCGATCGTGTCTGAGCTC---TCA 10816720 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || |||||||||||||| || || ||||| || |||||||| Sbjct 10816719 ACCTCGAGGGTTATCGTCTTCCCGGTTAGGGTTTTGACAAAGATCTGCAT 10816670 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||| | ||| || || || || || || || || Sbjct 12024841 CCACCTCGGAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGCC 12024782 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || | ||| ||| | |||| Sbjct 12024781 AGAGTACGCCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGG 12024722 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || ||||| || ||||| || || ||||| || || || || | ||| ||| ||| Sbjct 12024721 ATCCCTTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATGGTATCAGAACTC---TCT 12024665 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||||||||||| ||||| || || |||||||| Sbjct 12024664 ACCTCCAGGGTAATCGTCTTCCCGGTCAATGTCTTAACAAAAATCTGCAT 12024615 Score = 116 bits (128), Expect = 9e-21 Identities = 179/250 (72%), Gaps = 9/250 (4%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | || ||||| || | || || || ||||| || || | Sbjct 10317669 CATG-CCGCCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAAT 10317611 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || | ||||| ||||| || | || ||||| ||||||||||| ||||| || Sbjct 10317610 CCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCG 10317551 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 ||| || ||||| || |||||||| || || || ||||| || || | || |||| Sbjct 10317550 GTGGAATCCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAGCTC- 10317492 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGT 288478 || || ||||| ||||| ||||| ||||||| ||| || || || ||||||| | ||| Sbjct 10317491 --TCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCA-TCTGT 10317435 Query 288479 TATTC-TAAT 288487 || || |||| Sbjct 10317434 TAATCGTAAT 10317425 Score = 116 bits (128), Expect = 9e-21 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || ||||| || || || |||||| Sbjct 10318121 CCACCACGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCG 10318062 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || |||||||| || | ||| || || Sbjct 10318061 AGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 10318002 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || ||||| |||||||| || || |||||||| || || | ||| ||| || Sbjct 10318001 ATCCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGCTC---TCC 10317945 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || |||||||||||||||| ||||||||||| ||||||||| Sbjct 10317944 ACCTCCAGGGTAATCGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCATT 10317894 Score = 113 bits (124), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || ||||||| || ||| || || || || || || |||||||| | ||| || || Sbjct 12024595 ACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCGAGCGTCCTTCCATCCTCC 12024536 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | || || || |||||||||| |||||| || || || ||||| || |||||| Sbjct 12024535 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGG 12024476 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTC 288441 || || || || ||||| || || | ||| ||| || |||||||| || |||||| Sbjct 12024475 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTC---TCGACTTCGAGGGTAATCGTC 12024419 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||||||||||||||| Sbjct 12024418 TTTCCCGTTAGGGTTTTGACGAATATCTGCAT 12024387 Score = 105 bits (116), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| || || || ||||| ||||| || || || || | ||| || Sbjct 10817337 AGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCCGCAAGAGTCCTTCCATCC 10817278 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | ||||| || |||||||||| |||||| ||| ||| |||||||| || || Sbjct 10817277 TCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGTGGAATTCCTTCCTTGTCT 10817218 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATC 288438 |||||||| || || || || || || | || |||| || ||||| | || || Sbjct 10817217 TGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTC---TCAACTTCCAAAGTAATT 10817161 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| || ||||||||||| Sbjct 10817160 GTTTTCCCAGTAAGGGTCTTAACAAATATCTGCAT 10817126 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || || || ||||| | ||||| || ||||| || || || || |||||| Sbjct 10817088 TCTTTCTGAATGTTGTAATCGGCCAAGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAG 10817029 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | || || || || || ||||| |||||||| || || || ||||| Sbjct 10817028 ATCAATCTTTGCTGGTCCGGCGGTATCCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTA 10816969 Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| ||| || || || || |||||||||||||| || || || ||| Sbjct 10816968 TCAATCGTATCCGAACTC---TCCACCTCCAGAGTGATCGTCTTCCCAGTTAGGGTTTTG 10816912 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 10816911 ACGAAGATCTGCAT 10816898 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||| | ||| || || || || ||||| || || Sbjct 10817580 CCACCACGAAGGCGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCT 10817521 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || | || || || || ||||| || | ||| ||| ||| Sbjct 10817520 AAAGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGA 10817461 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || ||||| || || || || || || || |||| ||| |||| || Sbjct 10817460 ATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATAGTATCTGAGCTC---TCC 10817404 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || |||||||| |||| |||||||| ||||||||||| Sbjct 10817403 ACCTCCAGAGTAATAGTCTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 10817354 Score = 87.8 bits (96), Expect = 4e-12 Identities = 160/233 (69%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || || || | || || ||||| | ||| || ||||| || ||||| || Sbjct 10936582 TGACCCCCACGAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCA 10936523 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || | | || || || || | || || || || ||||| || | ||| ||| | | Sbjct 10936522 GCTAAATTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGT 10936463 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || ||||| |||||||| || || || || || || || || | ||| ||| Sbjct 10936462 GGAATCCCTTCCTTATCCTGAATCTTAGCCTTGACATTGTCAATGGTATCAGAACTC--- 10936406 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || ||||| || |||||||||||||| |||||||| Sbjct 10936405 TCCACCTCCAGGGTAATTGTTTTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 10936353 >seq1 Length=28940139 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || |||||||||||||| ||||| ||||| || || || | ||||| || || || Sbjct 20995768 TTCCTTCTGGATATTATAGTCAGCGAGTGTGCGACCATCCTCGAGCTGTTTACCAGCAAA 20995709 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | ||| ||| |||||| ||||| || |||||||| || ||||| || || Sbjct 20995708 GATAAGCCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCTTTTACATT 20995649 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||| || || || || || ||||| ||||| ||||| || || Sbjct 20995648 ATCAATGGTGTCGGAGCTTTCAACCTCAAGGGTTATTGTCTTGCCGGTGAGAGTTTTCAC 20995589 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 20995588 AAAGATTTGCAT 20995577 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| ||| |||||| ||||| |||||||| || Sbjct 20996715 CCACCACGGAGGCGAAGAACCAAGTGAAGAGTGGATTCTTTCTGGATGTTATAGTCTGCA 20996656 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||| | || ||||| || || || || | ||| ||| |||| Sbjct 20996655 AGAGTCCTTCCATCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGATCTGGTGGG 20996596 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| ||||| ||||||||||| || || | || ||| || Sbjct 20996595 ATACCCTCCTTGTCCTGAATTTTTGCTTTCACGTTGTCGATGGTGTCAGAACTTTCAACC 20996536 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| || || || || || |||||||| Sbjct 20996535 TCAAGAGTAATTGTTTTTCCGGTGAGGGTTTTCACAAAGATCTGCAT 20996489 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | ||| || | |||| ||| || || ||||| |||||||| || Sbjct 21032722 CCACCCCTGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCA 21032663 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | |||||| || || ||||| || | || || |||| Sbjct 21032662 AGAGTGCGGCCATCCTCGAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 21032603 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || ||||| || || || || | || ||| ||| Sbjct 21032602 ATCCCTTCCTTATCCTGGATCTTGGCTTTTACATTATCAATGGTGTCAGAGCT---TTCG 21032546 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| ||||| |||||||| || || || ||||| Sbjct 21032545 ACCTCAAGGGTTATGGTCTTGCCGGTGAGAGTCTTCACAAAGATTTGCAT 21032496 Score = 98.7 bits (108), Expect = 2e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | |||| || ||| || || || || ||||| || Sbjct 21033178 CCACCACGAAGGCGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCA 21033119 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||||| || ||||| || || ||||| | ||| ||| | ||| Sbjct 21033118 AGGGTACGGCCATCTTCTAGCTGCTTTCCAGCAAAAATCAGTCTCTGCTGATCAGGAGGG 21033059 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 ||||| || || ||||| || || || || || || || || | ||| ||| || Sbjct 21033058 ATTCCCTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATTGTATCAGAACTC---TCA 21033002 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| | ||||| || || || ||||| || || || |||||||||||| Sbjct 21033001 ACTTCCAAGGTGATAGTTTTACCAGTCAGGGTTTTCACAAATATCTGCATT 21032951 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || ||||||||||| || ||||| || || || | |||||| || || || Sbjct 21032914 TCCTTCTGAATGTTATAGTCGGCAAGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAA 21032855 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | || || |||||| ||||| || ||||| || || ||||| || || Sbjct 21032854 ATAAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTTGGCTTTGACATTG 21032795 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| ||| ||| || || || ||||| || || || || || ||||| || Sbjct 21032794 TCAATAGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTTACA 21032735 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 21032734 AAGATCTGCAT 21032724 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| || | |||| ||| || || || ||||| ||||||||| Sbjct 21033406 CCTCCACGAAGGCGAAGGACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAGTCGGCG 21033347 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||| | || || || || ||||| || | ||| || | ||| Sbjct 21033346 AGGGTCCTTCCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGCGGG 21033287 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTCT 288423 || ||||| || || || || || ||||| || || || |||| ||| ||| || Sbjct 21033286 ATGCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATAGTATC---CGAACTCTCA 21033230 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | || || ||||| || || |||||||| || || || ||||| Sbjct 21033229 ACTTCTAAGGTAATGGTCTTGCCAGTAAGAGTCTTAACAAAGATTTGCAT 21033180 Score = 89.7 bits (98), Expect = 1e-12 Identities = 161/233 (69%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || || ||||| | ||| || || ||||| || || || || Sbjct 20996943 CCTCCACGGAGACGGAGCACAAGATGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGCA 20996884 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | ||||||||| || ||||||| | ||| || |||||| Sbjct 20996883 AGAGTCCTTCCATCCTCAAGTTGTTTTCCAGCAAAGATCAACCTCTGCTGG---TCTGGG 20996827 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---T 288420 || || || ||||||||||| || || ||||| || || || | || ||| Sbjct 20996826 GGAATCCCCTCCTTATCCTGGATCTTAGCCTTCACATTGTCAATTGTGTC---CGAACTC 20996770 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| || ||||| || || ||||| || || |||||||| Sbjct 20996769 TCAACCTCCAATGTGATGGTTTTCCCAGTGAGTGTCTTCACAAAAATCTGCAT 20996717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179633270177844