Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1229 286 3e-72 seq1030 244 1e-59 seq1165 150 2e-31 seq1282 111 2e-19 seq1 104 2e-17 >seq1229 Length=21133251 Score = 286 bits (316), Expect = 3e-72 Identities = 417/589 (71%), Gaps = 3/589 (1%) Strand=Plus/Minus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 || ||| |||||| || || ||||| || | || || || | || || || ||||| Sbjct 20051136 TGTACAACAAGCACGCGAAATCGCAGTGGAGTCCTTCATCTCGCGAGATTAGCTCGTTCG 20051077 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||| || | ||| ||||| | ||||| ||||| | ||||||||| ||| |||||||| Sbjct 20051076 AGAAGGTTAGGCCCGGCATTAACCCGCGCTTTTTCAACCAAAATATCGCGCAGAAACTGC 20051017 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 |||| ||||| | || || ||| || || || | ||| | ||| |||| || | Sbjct 20051016 CCGAGAAGAATATCCCTTCCACGCAGGCAAACGCTATCAGTCTCTCCGCGAATGTC---T 20050960 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 | || | ||||||| || ||||| |||||||||| |||||||||| ||||| Sbjct 20050959 CCGAGCCGTCGATCCAATTTAGGGCCCAATCGGCCTTTTTGGCAACGCACGGCACCGTTT 20050900 Query 133124 CGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGG 133183 | | |||| || || ||| || || || ||| | ||| || || | ||| Sbjct 20050899 CAAAGGCGCGAAATAAGCGGCTCTTTTCGTCGGAGTTTTTTATGTACGTTTCTAGAAGGA 20050840 Query 133184 TCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCG 133243 ||| |||||||| ||||| | |||||| ||||||||||| |||||||| ||| |||| Sbjct 20050839 GCGAGTACATTTCGGAGTGGATGTTCTCGATGGCGATTTGGAAGCCGTAGAAGGCACGCG 20050780 Query 133244 CCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGT 133303 ||||| || || ||||||| ||| | || | || |||||| |||||| || | Sbjct 20050779 CCTCGGAGACTTGGACTTCTTTCATGAACCTGGCGGCGAGGTTTTCGAGGACGATTCCAT 20050720 Query 133304 CGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC 133363 | ||||||||| ||||| ||||||||| ||||||| || ||||| | || | | | Sbjct 20050719 CCGAGGCGGCGAAGAAGGCGAGCACGTGCGTGATGAAGTGTTTCTCGTCGGCGGTTAGGG 20050660 Query 133364 GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCT 133423 ||||| | ||| |||||| |||||||| |||||||| | |||||||| || || | Sbjct 20050659 ATTCCCACTGGCGGATGTCCTGCGACAGGTCGACCTCCTCCGCCGTCCAAAATGAAGCTT 20050600 Query 133424 CGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAAT 133472 ||||||| |||||||| ||| || |||| || || || ||||| || Sbjct 20050599 CGGCTTTCTTGTACATTTCCCAGATTTCCGGGTACTGGATTGGAAACAT 20050551 >seq1030 Length=25649276 Score = 244 bits (270), Expect = 1e-59 Identities = 571/845 (68%), Gaps = 21/845 (2%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAG-GAAATGAG 132662 ||||||||||| || || | || |||||||||||||| || |||| ||| || || || Sbjct 1352407 TTTTGATATTCCCCAACTCTCTTTTCAAAAAAATTAGTCTT-CCCTTGAAGCGAGATCAG 1352349 Query 132663 CGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTG--GTGCCGATCAGGTCGACG 132720 | ||| |||| || || || || ||| |||| || || | || | | Sbjct 1352348 CTCCATCCAATCAAAAGGATTCGCCACACCGTACAGCTTCCCGTACCCA--AGCGCACCC 1352291 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 | || || || || || ||||| ||||| || ||| ||| | ||| | |||| | Sbjct 1352290 AACAATCTATCCGCGACAAACTCTATGTACTGACTCATCAATTCTCCATTCATCCCCACC 1352231 Query 132781 AGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 | |||| | ||||||||| ||| | ||| | ||| || | ||||| || | || Sbjct 1352230 A-ACGCGCACGGCAGCGCATCGCACACAAACTCTCTCTCTATCTCCACCGCCTCCTTCAC 1352172 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGC--CGTTGCACCAAATGCTTGAACATCAAGCAA 132897 | || | || | | || |||| || ||| | | | | || | ||| || ||| Sbjct 1352171 TAACGCCTTCACTCTCTCCTCGCTTAGCTTCGTC-CTCAATAAACT-GTACAACAGGCAC 1352114 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 || || ||||| || | ||||| || | || || | ||||| ||| || || || Sbjct 1352113 GCGAAATCGCAGTGGAGACCCTCATCTCGCGAGATCAACTCGTTTGAGAATGTTAATCCC 1352054 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 ||||| | ||||| ||||||||||||||||| ||| ||||| || || ||||| | Sbjct 1352053 GGCATTAACCCGCGCTTTTTGAGCCAAAATATCGCGCAAAAACTCCCTGAGAAGAAAATC 1351994 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATC 133077 ||||| ||| || || || | | | ||| |||| || || || | ||||| Sbjct 1351993 CCCTCCACGCAAGCAAACGCGATTAATCTCTCCGCGAAAGTC---TCCGAGCCGTCGATC 1351937 Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTG--ACGCACGGCATCGTTTCGATGGCGTTCA 133135 || | |||||| ||| |||||||| ||||| || | ||| |||||||||| | Sbjct 1351936 CAATTTAACGCCCACGTGGC--TTTCTTTGCGACGCAGGGAACCGTCTCGATGGCGTGAA 1351879 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTT 133195 | | |||| || || || ||| | ||| || || | || ||| ||||||| Sbjct 1351878 AGAGACGGTTCTTTTCGTCGGAGTCTTTGATGTAAGTTTCTAGAAGCAGCGAGTACATTT 1351819 Query 133196 CCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCT 133255 | ||||| | |||||| ||||||||||| |||||||| ||| || |||||| | |||| Sbjct 1351818 CGGAGTGGATGTTCTCGATGGCGATTTGGAAGCCGTAGAAGGCGCGAGCCTCGGCGACCT 1351759 Query 133256 GCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGA 133315 | || || ||| | || | || || ||| ||||||||||||| ||| |||| Sbjct 1351758 GGACCTCCGTCATGAACCTTCCGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGCTGCGA 1351699 Query 133316 AAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGC 133375 | ||||| ||||||||| ||| ||| || ||||| || | | | |||||||| || Sbjct 1351698 AGAAGGCGAGCACGTGCGTGACGAAGTGCTTCTCGTCAGCGGTTAGGGCCTCCCAGTGGC 1351639 Query 133376 GCGTGTCCTTG-GACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTG 133434 | | | |||| || || || || ||||| | |||||||||||||| |||||||| ||| Sbjct 1351638 G-GAGATCTTGCGAAAGATCAACTTCCTCAGCAGTCCAAAACGACGCTTCGGCTTTCTTG 1351580 Query 133435 TACAT 133439 ||||| Sbjct 1351579 TACAT 1351575 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || ||||| || ||||| ||| | || ||||| | | Sbjct 22532597 ATGCAGATCTTCGTGAAAACCCTAACGGGAAAGACCATAACCCTAGAGGTCGAATCATCG 22532656 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 22532657 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGATTCCACCGGACCAG 22532716 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| || || ||||| || |||| | ||||| |||||||||| Sbjct 22532717 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTAGCCGACTACAAC 22532776 Query 38424 ATCCAAAAGGA 38434 ||||||||||| Sbjct 22532777 ATCCAAAAGGA 22532787 >seq1165 Length=25613772 Score = 150 bits (166), Expect = 2e-31 Identities = 171/227 (75%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 38234 CTTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGT 38293 |||| |||| ||||| || ||||| ||||| || || ||||| ||||| || |||| || Sbjct 12023921 CTTTTAAAAGATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATTACTCTCGAAGT 12023980 Query 38294 CGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTC 38352 |||| | |||||| | | | |||| | || | || |||| ||||| || ||||| | Sbjct 12023981 CGAGAGCTCCGACACCATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGAATCC 12024039 Query 38353 CCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCA 38412 | | ||||| ||||| || || | ||| || |||||||| || |||| |||||| | Sbjct 12024040 CTCCGGACCAGCAGCGTCTGATCTTCGCCGGAAAACAGCTCGAAGACGGCCGCACCTTGG 12024099 Query 38413 ACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||| |||||||||||| ||||||| ||| ||||||| ||| Sbjct 12024100 CCGATTACAATATCCAAAAGGAATCGACGCTTCATCTGGTGCTTCGT 12024146 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| ||||| || ||||| ||||| ||||| || |||||| |||| || ||| | Sbjct 10935894 AAGATGCAGATATTTGTGAAAACCCTCACCGGCAAGACAATCACCCTCGAAGTGGAGAGC 10935953 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | |||| | || | || |||| ||||| ||||||||||| | || Sbjct 10935954 TCCGACACAATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGA 10936012 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | || || || || || || |||| ||||| | ||| || Sbjct 10936013 CCAGCAGCGTCTCATCTTTGCTGGGAAGCAACTCGAAGACGGCCGCACTTTGGCCGATTA 10936072 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| ||| | || ||||| | || || Sbjct 10936073 CAACATTCAAAAAGAATCCACTTTGCATCTTGTCCT 10936108 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || || || || ||| |||| |||||| | || Sbjct 10928116 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTCC 10928175 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| |||||||| || ||||||| Sbjct 10928176 GACACGATCGATAACG-TGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCA 10928234 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || || |||| |||| |||||| | ||| ||||| Sbjct 10928235 GCAGAGGCTGATCTTCGCCGGAAAGCAATTGGAAGACGGCCGCACCTTGGCCGATTACAA 10928294 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||||||| ||| | || ||||| | || || Sbjct 10928295 CATCCAAAAAGAATCCACCTTGCATCTTGTCCT 10928327 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| | || ||||| |||||||| |||| || ||| | || Sbjct 10317439 ATGCAGATCTTTGTGAAAACTTTGACCGGCAAGACCATCACTCTCGAGGTGGAGAGCTCC 10317498 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| || || ||||| | ||||| Sbjct 10317499 GACACGATCGACAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGGATTCCACCGGACCA 10317557 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||||| || | ||| || || ||||| || |||| ||||||| | || ||||| Sbjct 10317558 GCAGCGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCGGATTACAA 10317617 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| |||| || || | || || ||| | | |||||| Sbjct 10317618 CATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGCGGCGGC 10317666 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| | || |||||||| || || |||| |||||| | | Sbjct 10816214 ATGCAGATCTTCGTGAAAACCTTGACCGGCAAAACTATTACTCTCGAAGTCGAGAGCTCG 10816273 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||||||||| | ||||| Sbjct 10816274 GACACCATCGACAACG-TAAAGGCCAAGATCCAAGACAAGGAGGGAATTCCGCCGGACCA 10816332 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || || || ||||| || |||| |||||| | ||| ||||| Sbjct 10816333 GCAGAGGCTTATCTTTGCTGGAAAGCAGCTCGAGGACGGCCGCACCTTGGCCGATTACAA 10816392 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || ||| | || || ||| Sbjct 10816393 CATCCAGAAGGAGTCAACCCTTCATCTTGTCCTTCGT 10816429 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || || || || ||| |||| |||||| | || Sbjct 10868003 ATGCAGATCTTCGTCAAAACCCTGACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTCC 10868062 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| |||||||| || ||||||| Sbjct 10868063 GACACGATCGATAACG-TGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCA 10868121 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || || || || |||| || ||| | ||| ||||| Sbjct 10868122 GCAGAGGCTGATCTTCGCTGGAAAGCAACTCGAAGACGGCCGGACCTTGGCCGATTACAA 10868181 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||||||| ||| | || ||||| | || || Sbjct 10868182 CATCCAAAAAGAATCCACCTTGCATCTTGTCCT 10868214 Score = 102 bits (112), Expect = 8e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || ||| | || || || || || ||| | || || ||| | | Sbjct 10317894 AATGCAGATCTTCGTCAAGACGTTGACCGGGAAGACGATTACCCTGGAGGTGGAGAGCTC 10317953 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||||| | | |||| | || | || |||| ||||||||||| ||||| | |||| Sbjct 10317954 CGACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAAGAGGGGATTCCTCCGGACC 10318012 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| ||||||| | ||| ||||| ||||| || || | || || ||| ||| |||| Sbjct 10318013 AGCAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCGCCGATTACA 10318072 Query 38422 ACATCCAAAAGGA 38434 |||| |||||||| Sbjct 10318073 ACATTCAAAAGGA 10318085 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| || || |||||||| ||||| |||| || ||| | Sbjct 10927885 AATATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACGATCACTCTCGAAGTGGAGAGC 10927944 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | |||| | || | || |||| ||||| ||||| || || | || Sbjct 10927945 TCTGACACAATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGA 10928003 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| || || | ||| || || || || || || | |||||| | ||| || Sbjct 10928004 TCAGCAGCGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTA 10928063 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||||||| ||||| | ||||| || | ||||| Sbjct 10928064 CAACATCCAGAAGGAGTCAACGCTCCACCTCGTGCT 10928099 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || || || || ||||| || || | || || ||| | | Sbjct 10817126 ATGCAGATATTTGTTAAGACCCTTACTGGGAAAACAATTACTTTGGAAGTTGAGAGCTCA 10817185 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | |||||||| ||||| || |||||||| | || || Sbjct 10817186 GACACAATTGACAATGTCAAGGCAAAAATCCAAGACAAGGAAGGAATTCCACCGGATCAG 10817245 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| ||||||||||| || || | | || || || || ||| Sbjct 10817246 CAGCGTTTGATCTTCGCTGGCAAACAGCTTGAGGATGGAAGGACTCTTGCGGATTATAAC 10817305 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| |||| || ||| |||| ||||| |||| || || Sbjct 10817306 ATCCAGAAGGAGTCGACCCTTCATCTGGTTCTGCGCCTGAGGGGTGG 10817352 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| || || |||||||| ||||| |||| || ||| | Sbjct 10867772 AATATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACGATCACTCTCGAAGTGGAGAGC 10867831 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | |||| | || | || |||| |||| ||||| || || | || Sbjct 10867832 TCTGACACAATCGACAACG-TCAAGGCCAAGATCCAGCACAAGGAGGGGATCCCTCCGGA 10867890 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| || || | ||| || || || || || || | |||||| | ||| || Sbjct 10867891 TCAGCAGCGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTA 10867950 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||||||| ||||| | ||||| || | ||||| Sbjct 10867951 CAACATCCAGAAGGAGTCAACGCTCCACCTCGTGCT 10867986 >seq1282 Length=25111302 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || ||||| || ||||| ||| | || ||||| | | Sbjct 21395116 ATGCAGATCTTCGTGAAAACCCTAACGGGAAAGACCATAACCCTAGAGGTCGAATCATCG 21395057 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 21395056 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGATTCCACCGGACCAG 21394997 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| || || ||||| || |||| | ||||| |||||||||| Sbjct 21394996 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTAGCCGACTACAAC 21394937 Query 38424 ATCCAAAAGGA 38434 ||||||||||| Sbjct 21394936 ATCCAAAAGGA 21394926 >seq1 Length=28940139 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || ||||| || ||||| || || ||||| ||| | || || || | | Sbjct 21029201 ATGCAAATCTTTGTAAAGACCCTCACTGGAAAGACCATTACCCTTGAGGTGGAAAGCTCG 21029260 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| ||||| | || || || || || || | ||||| Sbjct 21029261 GACACCATTGACAATGTCAAAGCCAAAATTCAGGATAAGGAAGGGATCCCACCAGACCAG 21029320 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || ||||||| | || |||||||| || || || | ||||| || ||||||||| Sbjct 21029321 CAAAGGCTCATCTTTGCTGGCAAACAACTTGAGGATGGACGCACACTTGCAGACTACAAC 21029380 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||||| | || || |||||||| || ||| | || || || Sbjct 21029381 ATCCAGAAGGAATCAACCCTTCATTTGGTACTTCGTCTCAGGGGTGG 21029427 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || ||||| || ||||| || || || |||||| | || || || | || Sbjct 20996033 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCC 20996092 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| ||||| | || || || || || || | ||||| Sbjct 20996093 GACACCATTGACAATGTCAAAGCCAAAATTCAGGATAAGGAAGGGATCCCACCAGACCAG 20996152 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || ||||||| | || || ||||| || || || | ||||| || ||||||||| Sbjct 20996153 CAAAGGCTCATCTTTGCCGGTAAACAACTAGAGGATGGACGCACACTTGCAGACTACAAC 20996212 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| |||||| | || || |||||||| || ||| | || || ||| Sbjct 20996213 ATCCAGAAGGAATCAACCCTTCATTTGGTCCTCCGTCTCAGGGGTGGC 20996260 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| || ||||| ||||| | || || ||| | Sbjct 21033636 ATGCAAATTTTTGTGAAGACTCTCACTGGAAAAACAATCACTCTGGAGGTAGAGAGTTCG 21033695 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| || || ||||| ||||| | ||||| Sbjct 21033696 GACACTATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATTCCACCAGACCAG 21033755 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | |||| || ||||| ||||| || || | | | ||||| || |||||| Sbjct 21033756 CAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAAGATGGGAGGACCCTTGCAGATTACAAC 21033815 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || || |||||| | || |||||||||||| || Sbjct 21033816 ATTCAGAAGGAATCCACACTGCATTTGGTGTTG 21033848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500164059480320