Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq1113 574 5e-159 seq244 574 5e-159 seq1320 571 7e-158 seq993 571 7e-158 seq1136 513 2e-140 seq1074 417 9e-112 seq965 349 4e-91 >seq1113 Length=8127 Score = 574 bits (636), Expect = 5e-159 Identities = 724/989 (73%), Gaps = 4/989 (0%) Strand=Plus/Plus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || || ||||||||||| ||||||||||| || | || |||| ||| ||| | ||| Sbjct 1855 GACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 1914 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| |||| || || || || || || |||||||| |||||| | || Sbjct 1915 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCC 1974 Query 166311 AGCAGTTATCTGGAGGG-TGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGC 166369 || ||| |||| || ||||| ||| | || || |||||||| ||||| || || Sbjct 1975 AGTTCCTATTTGGAAGGCTGCAA-CTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAG 2033 Query 166370 TATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 166429 | | | |||||| | | | || ||||||||||| || ||||| ||||| | || Sbjct 2034 TTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCTG 2093 Query 166430 GTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGG 166489 ||| ||| | || || |||||| | ||||||||||||||||||||||| | ||||| || Sbjct 2094 GTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGG 2153 Query 166490 TTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAA 166548 ||||||| | || || |||||| | ||||| ||| | | | || || || ||||||| Sbjct 2154 TTTCATGTTACGTCAATTTGAACTTGCTCGCTCTGTTCAAT-TGCGACCTTATAATGCAA 2212 Query 166549 TCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTC 166608 | || || |||| ||| |||||||| || ||| ||| || || || || || || |||| Sbjct 2213 TAGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTC 2272 Query 166609 AATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTT 166668 | || ||||||| || || || ||| || || | || || || |||||| |||||| Sbjct 2273 AGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTT 2332 Query 166669 TCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTA 166728 | | ||||| || || || |||||| ||||||| |||||||||||||| || || ||| Sbjct 2333 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTG 2392 Query 166729 TTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATC 166788 | | || | ||| |||| | ||||| ||||| | ||| ||||| || ||| | | | Sbjct 2393 TATTGGGCGCTGCTCTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTG 2452 Query 166789 AAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCT 166848 |||||||||| ||||| || ||| || || || | || |||| |||||||||| Sbjct 2453 AAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCT 2512 Query 166849 ATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATA 166908 |||| ||||| || || ||||||| ||||||||| ||||| || |||| ||| |||| Sbjct 2513 ATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATA 2572 Query 166909 AGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCA 166968 | | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| | Sbjct 2573 AACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTC 2632 Query 166969 TCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAA 167028 | || | | || || || || ||||| |||||||||||||| |||||||| ||| | Sbjct 2633 TTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCC 2692 Query 167029 GGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGG 167088 | ||||| || |||||||| ||||| || ||||| || || || ||||| || || |||| Sbjct 2693 GTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGG 2752 Query 167089 GTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAG 167148 |||| ||| |||||||||| || ||||| |||||||| | | |||||||||| | Sbjct 2753 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 2812 Query 167149 AGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 ||||||| || | || |||||||| ||| Sbjct 2813 AGGTTCTACCCCGTGGAAACGCTCTTTAA 2841 >seq244 Length=4089 Score = 574 bits (636), Expect = 5e-159 Identities = 724/989 (73%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || || ||||||||||| ||||||||||| || | || |||| ||| ||| | ||| Sbjct 3439 GACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 3380 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| |||| || || || || || || |||||||| |||||| | || Sbjct 3379 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCC 3320 Query 166311 AGCAGTTATCTGGAGGG-TGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGC 166369 || ||| |||| || ||||| ||| | || || |||||||| ||||| || || Sbjct 3319 AGTTCCTATTTGGAAGGCTGCAA-CTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAG 3261 Query 166370 TATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 166429 | | | |||||| | | | || ||||||||||| || ||||| ||||| | || Sbjct 3260 TTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCTG 3201 Query 166430 GTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGG 166489 ||| ||| | || || |||||| | ||||||||||||||||||||||| | ||||| || Sbjct 3200 GTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGG 3141 Query 166490 TTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAA 166548 ||||||| | || || |||||| | ||||| ||| | | | || || || ||||||| Sbjct 3140 TTTCATGTTACGTCAATTTGAACTTGCTCGCTCTGTTCAAT-TGCGACCTTATAATGCAA 3082 Query 166549 TCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTC 166608 | || || |||| ||| |||||||| || ||| ||| || || || || || || |||| Sbjct 3081 TAGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTC 3022 Query 166609 AATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTT 166668 | || ||||||| || || || ||| || || | || || || |||||| |||||| Sbjct 3021 AGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTT 2962 Query 166669 TCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTA 166728 | | ||||| || || || |||||| ||||||| |||||||||||||| || || ||| Sbjct 2961 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTG 2902 Query 166729 TTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATC 166788 | | || | ||| |||| | ||||| ||||| | ||| ||||| || ||| | | | Sbjct 2901 TATTGGGCGCTGCTCTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTG 2842 Query 166789 AAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCT 166848 |||||||||| ||||| || ||| || || || | || |||| |||||||||| Sbjct 2841 AAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCT 2782 Query 166849 ATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATA 166908 |||| ||||| || || ||||||| ||||||||| ||||| || |||| ||| |||| Sbjct 2781 ATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATA 2722 Query 166909 AGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCA 166968 | | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| | Sbjct 2721 AACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTC 2662 Query 166969 TCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAA 167028 | || | | || || || || ||||| |||||||||||||| |||||||| ||| | Sbjct 2661 TTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCC 2602 Query 167029 GGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGG 167088 | ||||| || |||||||| ||||| || ||||| || || || ||||| || || |||| Sbjct 2601 GTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGG 2542 Query 167089 GTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAG 167148 |||| ||| |||||||||| || ||||| |||||||| | | |||||||||| | Sbjct 2541 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 2482 Query 167149 AGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 ||||||| || | || |||||||| ||| Sbjct 2481 AGGTTCTACCCCGTGGAAACGCTCTTTAA 2453 >seq1320 Length=5450 Score = 571 bits (632), Expect = 7e-158 Identities = 723/989 (73%), Gaps = 4/989 (0%) Strand=Plus/Plus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || || ||||||||||| ||||||||||| || | || |||| ||| ||| | ||| Sbjct 4440 GACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 4499 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| |||| || || || || || || |||||||| |||||| | || Sbjct 4500 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCC 4559 Query 166311 AGCAGTTATCTGGAGGG-TGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGC 166369 || ||| |||| || ||||| ||| | || || |||||||| ||||| || || Sbjct 4560 AGTTCCTATTTGGAAGGCTGCAA-CTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAG 4618 Query 166370 TATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 166429 | | | |||||| | | | || ||||||||||| || ||||| ||||| | || Sbjct 4619 TTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCTG 4678 Query 166430 GTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGG 166489 ||| ||| | || || |||||| | ||||||||||||||||||||||| | ||||| || Sbjct 4679 GTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGG 4738 Query 166490 TTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAA 166548 ||||||| | || || |||||| | ||||| ||| | | | || || || ||||||| Sbjct 4739 TTTCATGTTACGTCAATTTGAACTTGCTCGCTCTGTTCAAT-TGCGACCTTATAATGCAA 4797 Query 166549 TCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTC 166608 | || || |||| ||| |||||||| || ||| ||| || || || || || || |||| Sbjct 4798 TAGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTC 4857 Query 166609 AATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTT 166668 | || ||||||| || || || ||| || || | || || || |||||| |||||| Sbjct 4858 AGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTT 4917 Query 166669 TCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTA 166728 | | ||||| || || || |||||| ||||||| |||||||||||||| || || ||| Sbjct 4918 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTG 4977 Query 166729 TTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATC 166788 | | || | ||| |||| | ||||| ||||| | ||| ||||| || ||| | | | Sbjct 4978 TATTGGGCGCTGCTCTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTG 5037 Query 166789 AAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCT 166848 |||||||||| ||||| || ||| || || || | || |||| |||||||||| Sbjct 5038 AAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCT 5097 Query 166849 ATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATA 166908 |||| ||||| || || ||||||| ||||||||| ||||| || |||| ||| |||| Sbjct 5098 ATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATA 5157 Query 166909 AGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCA 166968 | | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| | Sbjct 5158 AACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTC 5217 Query 166969 TCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAA 167028 | || | | || || || || ||||| |||||||||||||| |||||||| ||| | Sbjct 5218 TTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCC 5277 Query 167029 GGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGG 167088 | ||||| || |||||||| ||||| || ||||| || || || ||||| || || |||| Sbjct 5278 GTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGG 5337 Query 167089 GTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAG 167148 |||| ||| |||||||||| || ||||| |||||||| | | |||||||||| | Sbjct 5338 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 5397 Query 167149 AGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 ||| ||| || | || |||||||| ||| Sbjct 5398 AGGATCTACCCCGTGGAAACGCTCTTTAA 5426 >seq993 Length=11053 Score = 571 bits (632), Expect = 7e-158 Identities = 724/989 (73%), Gaps = 5/989 (1%) Strand=Plus/Plus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || || ||||||||||| ||||||||||| || | || |||| ||| ||| | ||| Sbjct 8574 GACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 8633 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| |||| || || || || || || |||||||| |||||| | || Sbjct 8634 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCC 8693 Query 166311 AGCAGTTATCTGGAGGG-TGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGC 166369 || ||| |||| || ||||| ||| | || || |||||||| ||||| || || Sbjct 8694 AGTTCCTATTTGGAAGGCTGCAA-CTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAG 8752 Query 166370 TATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 166429 | | | |||||| | | | || ||||||||||| || ||||| ||||| | || Sbjct 8753 TTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCTG 8812 Query 166430 GTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGG 166489 ||| ||| | || || |||||| | ||||||||||||||||||||||| | ||||| || Sbjct 8813 GTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGG 8872 Query 166490 TTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAA 166548 ||||||| | || || |||||| | ||||| ||| | | | || || || ||||||| Sbjct 8873 TTTCATGTTACGTCAATTTGAACTTGCTCGCTCTGTTCAAT-TGCGACCTTATAATGCAA 8931 Query 166549 TCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTC 166608 | || || |||| ||| |||||||| || ||| ||| || || || || || || |||| Sbjct 8932 TAGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTC 8991 Query 166609 AATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTT 166668 | || ||||||| || || || ||| || || | || || || |||||| |||||| Sbjct 8992 AGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTT 9051 Query 166669 TCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTA 166728 | | ||||| || || || |||||| ||||||| |||||||||||||| || || ||| Sbjct 9052 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTG 9111 Query 166729 TTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATC 166788 | | || | ||| |||| | ||||| ||||| | ||| ||||| || ||| | | | Sbjct 9112 TATTGGGCGCTGCTCTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTG 9171 Query 166789 AAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCT 166848 |||||||||| ||||| || ||| || || || | || |||| |||||||||| Sbjct 9172 AAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCT 9231 Query 166849 ATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATA 166908 |||| ||||| || || ||||||| ||||||||| ||||| || |||| ||| |||| Sbjct 9232 ATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATA 9291 Query 166909 AGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCA 166968 | | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| | Sbjct 9292 AACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTC 9351 Query 166969 TCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAA 167028 | || | | || || || || ||||| |||||||||||||| |||||||| ||| | Sbjct 9352 TTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCC 9411 Query 167029 GGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGG 167088 | ||||| || |||||||| ||||| || ||||| || || || ||||| || || |||| Sbjct 9412 GTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCT-TTAAACGAGG 9470 Query 167089 GTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAG 167148 |||| ||| |||||||||| || ||||| |||||||| | | |||||||||| | Sbjct 9471 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 9530 Query 167149 AGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 ||||||| || | || |||||||| ||| Sbjct 9531 AGGTTCTACCCCGTGGAAACGCTCTTTAA 9559 >seq1136 Length=8532 Score = 513 bits (568), Expect = 2e-140 Identities = 629/855 (74%), Gaps = 3/855 (0%) Strand=Plus/Minus Query 166324 AGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTC 166383 ||| ||||| ||| | || || |||||||| ||||| || || | | | |||||| Sbjct 3668 AGGCTGCAA-CTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTT 3610 Query 166384 TACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGTGCCAACTTGGAG 166443 | | | || ||||||||||| || ||||| ||||| | ||||| ||| | || | Sbjct 3609 TGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCG 3550 Query 166444 GGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTTCGGC 166503 | |||||| | ||||||||||||||||||||||| | ||||| ||||||||| | || | Sbjct 3549 GTCTTTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTC 3490 Query 166504 AGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAATCGCTTTTTCTGGT 166562 | |||||| | ||||| ||| | | | || || || |||||||| || || |||| | Sbjct 3489 AATTTGAACTTGCTCGCTCTGTTCAAT-TGCGACCTTATAATGCAATAGCATTCTCTGCT 3431 Query 166563 CCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTT 166622 || |||||||| || ||| ||| || || || || || || ||||| || ||||||| Sbjct 3430 CCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTC 3371 Query 166623 TTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGATTC 166682 || || || ||| || || | || || || |||||| ||||||| | ||||| || Sbjct 3370 TTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTT 3311 Query 166683 CACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTGGTGCA 166742 || || |||||| ||||||| |||||||||||||| || || ||| | | || | ||| Sbjct 3310 CATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCT 3251 Query 166743 TTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAG 166802 |||| | ||||| ||||| | ||| ||||| || ||| | | | |||||||||| Sbjct 3250 CTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGT 3191 Query 166803 GCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTACA 166862 ||||| || ||| || || || | || |||| |||||||||||||| ||||| || Sbjct 3190 GCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACC 3131 Query 166863 GCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCAT 166922 || ||||||| ||||||||| ||||| || |||| ||| ||||| | ||||| ||| Sbjct 3130 GCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACAT 3071 Query 166923 TTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGT 166982 ||||||||| | ||||| || || | ||| | |||| ||| | | || | | || Sbjct 3070 TTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGC 3011 Query 166983 CTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGAT 167042 || || || ||||| |||||||||||||| |||||||| ||| | | ||||| || ||| Sbjct 3010 CTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGAT 2951 Query 167043 CCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGG 167102 ||||| ||||| || ||||| || || || ||||| || || |||||||| ||| ||||| Sbjct 2950 CCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGG 2891 Query 167103 ATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGA 167162 ||||| || ||||| |||||||| | | |||||||||| |||||||| || | Sbjct 2890 ATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGT 2831 Query 167163 GGTAACGCTCTCTAA 167177 || |||||||| ||| Sbjct 2830 GGAAACGCTCTTTAA 2816 >seq1074 Length=10062 Score = 417 bits (462), Expect = 9e-112 Identities = 547/753 (73%), Gaps = 6/753 (1%) Strand=Plus/Minus Query 166428 TGGTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATT 166487 ||| | ||| | || || ||| ||| ||| ||||| | ||||||||||| | || | Sbjct 4533 TGGGGTCAATTAGGCGGTCTT-GGGATTTTTTTGCTTTTCACGGTGCTTTCGGAATA-TA 4476 Query 166488 GGTTTCATGCTTCGGCAGTTTGAAATCGCTCGTCTAGTAGGTATTCGTCCGTACAATGCA 166547 || |||| | | || || |||||| | ||||| | || | || || || |||||| Sbjct 4475 GGGTTCAAGTTACGTCAATTTGAACTTGCTCGGTTTGTTCAATTGCGACCTTATAATGCA 4416 Query 166548 ATCG---CTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTG 166604 || | | || |||| ||| |||||||| || ||| ||| || || || || || || Sbjct 4415 ATAGTAGCATTCTCTGCTCC-ATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTA 4357 Query 166605 GGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTC 166664 ||||| || ||||||| || || || ||| || || | || || || |||||| || Sbjct 4356 GGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATC 4297 Query 166665 CTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCA 166724 ||||| | ||||| || || || |||||| ||||||| |||||||||||||| || || Sbjct 4296 CTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCC 4237 Query 166725 GGTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTG 166784 ||| | | || | ||| |||| | ||||| ||||| | ||| ||||| || ||| | Sbjct 4236 GGTGTATTGGGCGCTGCTCTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTA 4177 Query 166785 TATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAA 166844 | | |||||||||| ||||| || ||| || || || | || |||| |||||| Sbjct 4176 TTTGAAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAA 4117 Query 166845 ACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGT 166904 |||||||| ||||| || || ||||||| ||||||||| ||||| || |||| ||| Sbjct 4116 ACCTATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCC 4057 Query 166905 AATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGT 166964 ||||| | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| Sbjct 4056 AATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGT 3997 Query 166965 TCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAA 167024 | | || | | || || || || ||||| |||||||||||||| |||||||| ||| Sbjct 3996 GCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAA 3937 Query 167025 CTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAAT 167084 | | ||||| || |||||||| ||||| || ||||| || || || ||||| || || Sbjct 3936 ATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAAC 3877 Query 167085 GAGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCT 167144 |||||||| ||| |||||||||| || ||||| |||||||| | | |||||||| Sbjct 3876 GAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCT 3817 Query 167145 GAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 || |||||||| || | || |||||||| ||| Sbjct 3816 GAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 3784 >seq965 Length=51047765 Score = 349 bits (386), Expect = 4e-91 Identities = 394/525 (75%), Gaps = 2/525 (0%) Strand=Plus/Plus Query 164773 TGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCC 164832 ||| | ||| ||| | ||| | ||||| | |||||||| |||||| | |||||||| Sbjct 18211486 TGGATAACTAGCACTGAAAACTGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCT 18211545 Query 164833 TGTTTGCTCGCCGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGA 164891 ||| | |||| || | ||| ||||||| || || || |||||||| || || || Sbjct 18211546 ACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTTATTGCTGCTCCTCCAGTAGA 18211604 Query 164892 CATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTC 164951 ||||| |||||||||||||||| | || |||||| | || || || || || || || Sbjct 18211605 TATTGACGGTATTCGTGAACCTGCTTCTGGATCTCTACTTTATGGAAATAATATTATTTC 18211664 Query 164952 TGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGC 165011 | | || | |||| |||||| || || || | || || || || || |||||||| Sbjct 18211665 TAGCGCGATTATTCCTACTTCTACAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGC 18211724 Query 165012 TGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTT 165071 ||| || | ||||||||||| ||||| || |||||||| || | |||| | ||||| Sbjct 18211725 GGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTT 18211784 Query 165072 CCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTAT 165131 | | || ||||||||||| ||||||||||||||||||||||| || ||| || ||||| Sbjct 18211785 CGTAATTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTAGGTAT 18211844 Query 165132 GCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCT 165191 ||||||||||||| || |||||| | ||||| || || || | || |||||| | Sbjct 18211845 GCGTCCTTGGATTGCTGTTGCATATTTAACTCCTGTTGCAGCAGCGACTGCTGTTTTCTT 18211904 Query 165192 GGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTAC 165251 | |||| || |||||||||| ||||| ||||||||||||||||| || ||||||||||| Sbjct 18211905 GATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTAC 18211964 Query 165252 TTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTAT 165296 ||| |||| ||| | || ||||| || || || ||||| ||||| Sbjct 18211965 TTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTAT 18212009 Score = 297 bits (328), Expect = 2e-75 Identities = 379/523 (72%), Gaps = 18/523 (3%) Strand=Plus/Plus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACA 164850 ||||| ||||| | |||||||| |||||| | |||||||| ||| | |||| || Sbjct 17866749 AACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 17866808 Query 164851 ATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGA 164909 | ||| ||||||| || || || |||||||| || | || ||||| ||||||| ||| Sbjct 17866809 -TATGTATTTATTATAGCCTTAATTGCTGCTCCTCCAATAGATATTGACGGTATTCATGA 17866867 Query 164910 ACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTC 164969 |||||| | || |||||| | || || || || || || | |||||| | |||| | Sbjct 17866868 ACCTGTTTCTGGATCTCTACTTTATGGAAATAATATTATTTTTGGTGCGATTATTCCTAC 17866927 Query 164970 TTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATG 165029 |||| || || || | || || || || || |||||||| ||| || | |||||||| Sbjct 17866928 TTCTGCAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATG 17866987 Query 165030 GTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCTTG 165089 ||| ||||| || ||||||| || | |||| | |||||| | | ||||||||||| Sbjct 17866988 GTTATACAATGGCAGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 17867047 Query 165090 CTACA----------------TGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGC 165133 |||| ||||||||||||||||||| || ||| || ||||||| Sbjct 17867048 TTACATGGTTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAATTTCCGTCTGGGTATGC 17867107 Query 165134 GTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGG 165193 ||||||||||| || |||| | | |||| || || || | || |||||| || Sbjct 17867108 GTCCTTGGATTGTTGTTGCATGTTCAACTACTGTTGCAGCAGCGACTGCTGTTTTCTTGA 17867167 Query 165194 TCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTT 165253 |||| || |||||||||| ||||| ||||||||||||||||| || ||||||||||||| Sbjct 17867168 TCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTT 17867227 Query 165254 TTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTAT 165296 | |||| ||| | || ||||| || || || ||||| ||||| Sbjct 17867228 TCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTAT 17867270 Score = 168 bits (186), Expect = 8e-37 Identities = 210/285 (74%), Gaps = 2/285 (1%) Strand=Plus/Minus Query 166894 TTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTT-ATGCTGTTTGTTCCTGTTATGGGT 166952 |||| ||| ||||| | ||||| ||||| ||| ||| | ||||| || || | ||| Sbjct 16615009 TTGCTTTTTCCAATAAACGTTGGTTACATTTTTTTTATGTTATTTGTACCAGTAACCGGT 16614950 Query 166953 CTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTT 167012 | |||| ||| | || | |||| || || || ||||| |||||||||||||| Sbjct 16614949 TTATGGATGAGTGTTCTTGGAGTAGTTGGCCTAGCCCTGAACCTACGTGCTTATGACTTC 16614890 Query 167013 GTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAAC 167072 ||||| || ||| | | |||||||| |||||||| ||||| || ||||| | ||| || Sbjct 16614889 GTTTCTCAGGAAATCCGTGCAGCAGAAGATCCTGAATTTGAGACTTTCTACA-CAAAAAA 16614831 Query 167073 ATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGT 167132 ||||| || || ||||||| ||| |||||||||| || ||||| |||||||| | Sbjct 16614830 ATTCTTTTAAACAAGGGTATTCGTGCTTGGATGGCGGCTGAAGATCAGCCTCATGAAAAC 16614771 Query 167133 TTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 | |||||||||| |||||||| || | || |||||||| ||| Sbjct 16614770 CTTATATTCCCTGAGGAGGTTCTACCCTGTGGAAACGCTCTTTAA 16614726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563650950027520