Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1113 367 1e-96 seq244 367 1e-96 seq1320 363 2e-95 seq993 363 2e-95 seq1136 284 1e-71 seq965 255 7e-63 seq1074 215 6e-51 seq1 86.0 7e-12 >seq1113 Length=8127 Score = 367 bits (406), Expect = 1e-96 Identities = 703/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || || ||||| || || Sbjct 2841 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 2782 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || || || || | |||||| || || || ||||| Sbjct 2781 ATCTTGAGCCGCCATCCAAGCACGAATACCCTCGTTTAAAAGAATATTTTTTGTGTAGAA 2722 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || || ||||| || || | Sbjct 2721 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAAGCACG 2662 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || ||||| || || | || | || |||| | ||| | || || || Sbjct 2661 TAGGTTCAGGGCTAGGCCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTAC 2602 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 2601 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGAGA 2542 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| ||| |||||||| | || || || | || || Sbjct 2541 CCAAAAGCGGTTAGCGGTGACCATCGAATAGGTTTCTTCGGCTTGCGTTGGGTTAAAAGC 2482 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| || | ||| | || ||| || ||||| | || || Sbjct 2481 ACGGAATGT----GTTTGCA-----CCATCACCAT------------CTTCAAATAAAGT 2443 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || || ||||||||||| ||||| | || | || | || || ||||| Sbjct 2442 ATTTTCTACGGTAGCGCCATGAATGGCGCATAGCAGAGCAGCGCCCAATACACCGGCAAC 2383 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| ||||| || |||||||| || || || ||||| | || | ||| | Sbjct 2382 TCCCATCATATGAAAGGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAAAGGATGAA 2323 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || || || ||||| || || || |||||||||| |||||||||||| Sbjct 2322 TCGAAATATCGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGTGG 2263 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| ||||| || | | || || || || |||||||||||| | ||| || || Sbjct 2262 ATAAATCAGGAATACAGAAACAAAAACAGCAATTGGAGCAGAGAATGCTATTGCATTATA 2203 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||||| | ||| | || | |||||||| | | |||||||||||| ||||| Sbjct 2202 AGGTCGCAATTGAACAGAGCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTCC 2143 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| |||| ||||| || | ||| |||| ||| || Sbjct 2142 GAAAGCACCGTGGAGAGCAACAAAAGTCCAAAGACCGCCTAATTGACACCAGCGAGTAAA 2083 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || |||| | | ||| | | | | |||| Sbjct 2082 ATCTCCTTGTGCTTCAGGACCCCATAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 2023 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || ||||||||||| || || | ||| ||| || | ||||| Sbjct 2022 AGTCGAAACTGCGGCGGTTAAGAAGTTGCAGCCTTCCAAATAGGAACTGGCTAATCCATG 1963 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || ||| ||||||||| || | | | ||| || Sbjct 1962 GGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 1903 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || || |||||||| |||| || || || || || ||| |||||| Sbjct 1902 ACAAGGAAAGAGCAATAGGCCAGACCAACCTACAAAAACGAATCGGTCCCTCCGTAACCA 1843 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | || |||||| Sbjct 1842 GTCATCCATAATATCAAA 1825 >seq244 Length=4089 Score = 367 bits (406), Expect = 1e-96 Identities = 703/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || || ||||| || || Sbjct 2453 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 2512 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || || || || | |||||| || || || ||||| Sbjct 2513 ATCTTGAGCCGCCATCCAAGCACGAATACCCTCGTTTAAAAGAATATTTTTTGTGTAGAA 2572 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || || ||||| || || | Sbjct 2573 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAAGCACG 2632 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || ||||| || || | || | || |||| | ||| | || || || Sbjct 2633 TAGGTTCAGGGCTAGGCCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTAC 2692 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 2693 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGAGA 2752 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| ||| |||||||| | || || || | || || Sbjct 2753 CCAAAAGCGGTTAGCGGTGACCATCGAATAGGTTTCTTCGGCTTGCGTTGGGTTAAAAGC 2812 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| || | ||| | || ||| || ||||| | || || Sbjct 2813 ACGGAATGT----GTTTGCA-----CCATCACCAT------------CTTCAAATAAAGT 2851 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || || ||||||||||| ||||| | || | || | || || ||||| Sbjct 2852 ATTTTCTACGGTAGCGCCATGAATGGCGCATAGCAGAGCAGCGCCCAATACACCGGCAAC 2911 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| ||||| || |||||||| || || || ||||| | || | ||| | Sbjct 2912 TCCCATCATATGAAAGGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAAAGGATGAA 2971 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || || || ||||| || || || |||||||||| |||||||||||| Sbjct 2972 TCGAAATATCGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGTGG 3031 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| ||||| || | | || || || || |||||||||||| | ||| || || Sbjct 3032 ATAAATCAGGAATACAGAAACAAAAACAGCAATTGGAGCAGAGAATGCTATTGCATTATA 3091 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||||| | ||| | || | |||||||| | | |||||||||||| ||||| Sbjct 3092 AGGTCGCAATTGAACAGAGCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTCC 3151 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| |||| ||||| || | ||| |||| ||| || Sbjct 3152 GAAAGCACCGTGGAGAGCAACAAAAGTCCAAAGACCGCCTAATTGACACCAGCGAGTAAA 3211 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || |||| | | ||| | | | | |||| Sbjct 3212 ATCTCCTTGTGCTTCAGGACCCCATAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 3271 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || ||||||||||| || || | ||| ||| || | ||||| Sbjct 3272 AGTCGAAACTGCGGCGGTTAAGAAGTTGCAGCCTTCCAAATAGGAACTGGCTAATCCATG 3331 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || ||| ||||||||| || | | | ||| || Sbjct 3332 GGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 3391 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || || |||||||| |||| || || || || || ||| |||||| Sbjct 3392 ACAAGGAAAGAGCAATAGGCCAGACCAACCTACAAAAACGAATCGGTCCCTCCGTAACCA 3451 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | || |||||| Sbjct 3452 GTCATCCATAATATCAAA 3469 >seq1320 Length=5450 Score = 363 bits (402), Expect = 2e-95 Identities = 702/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| | || || ||||||| || || ||||| || || Sbjct 5426 TTAAAGAGCGTTTCCACGGGGTAGATCCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 5367 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || || || || | |||||| || || || ||||| Sbjct 5366 ATCTTGAGCCGCCATCCAAGCACGAATACCCTCGTTTAAAAGAATATTTTTTGTGTAGAA 5307 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || || ||||| || || | Sbjct 5306 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAAGCACG 5247 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || ||||| || || | || | || |||| | ||| | || || || Sbjct 5246 TAGGTTCAGGGCTAGGCCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTAC 5187 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 5186 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGAGA 5127 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| ||| |||||||| | || || || | || || Sbjct 5126 CCAAAAGCGGTTAGCGGTGACCATCGAATAGGTTTCTTCGGCTTGCGTTGGGTTAAAAGC 5067 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| || | ||| | || ||| || ||||| | || || Sbjct 5066 ACGGAATGT----GTTTGCA-----CCATCACCAT------------CTTCAAATAAAGT 5028 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || || ||||||||||| ||||| | || | || | || || ||||| Sbjct 5027 ATTTTCTACGGTAGCGCCATGAATGGCGCATAGCAGAGCAGCGCCCAATACACCGGCAAC 4968 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| ||||| || |||||||| || || || ||||| | || | ||| | Sbjct 4967 TCCCATCATATGAAAGGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAAAGGATGAA 4908 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || || || ||||| || || || |||||||||| |||||||||||| Sbjct 4907 TCGAAATATCGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGTGG 4848 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| ||||| || | | || || || || |||||||||||| | ||| || || Sbjct 4847 ATAAATCAGGAATACAGAAACAAAAACAGCAATTGGAGCAGAGAATGCTATTGCATTATA 4788 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||||| | ||| | || | |||||||| | | |||||||||||| ||||| Sbjct 4787 AGGTCGCAATTGAACAGAGCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTCC 4728 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| |||| ||||| || | ||| |||| ||| || Sbjct 4727 GAAAGCACCGTGGAGAGCAACAAAAGTCCAAAGACCGCCTAATTGACACCAGCGAGTAAA 4668 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || |||| | | ||| | | | | |||| Sbjct 4667 ATCTCCTTGTGCTTCAGGACCCCATAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 4608 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || ||||||||||| || || | ||| ||| || | ||||| Sbjct 4607 AGTCGAAACTGCGGCGGTTAAGAAGTTGCAGCCTTCCAAATAGGAACTGGCTAATCCATG 4548 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || ||| ||||||||| || | | | ||| || Sbjct 4547 GGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 4488 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || || |||||||| |||| || || || || || ||| |||||| Sbjct 4487 ACAAGGAAAGAGCAATAGGCCAGACCAACCTACAAAAACGAATCGGTCCCTCCGTAACCA 4428 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | || |||||| Sbjct 4427 GTCATCCATAATATCAAA 4410 >seq993 Length=11053 Score = 363 bits (402), Expect = 2e-95 Identities = 703/1038 (68%), Gaps = 22/1038 (2%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || || ||||| || || Sbjct 9559 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 9500 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || || || || | |||||| || || || ||||| Sbjct 9499 ATCTTGAGCCGCCATCCAAGCACGAATACCCTCGTTTA-AAGAATATTTTTTGTGTAGAA 9441 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || || ||||| || || | Sbjct 9440 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAAGCACG 9381 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || ||||| || || | || | || |||| | ||| | || || || Sbjct 9380 TAGGTTCAGGGCTAGGCCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTAC 9321 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 9320 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGAGA 9261 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| ||| |||||||| | || || || | || || Sbjct 9260 CCAAAAGCGGTTAGCGGTGACCATCGAATAGGTTTCTTCGGCTTGCGTTGGGTTAAAAGC 9201 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| || | ||| | || ||| || ||||| | || || Sbjct 9200 ACGGAATGT----GTTTGCA-----CCATCACCAT------------CTTCAAATAAAGT 9162 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || || ||||||||||| ||||| | || | || | || || ||||| Sbjct 9161 ATTTTCTACGGTAGCGCCATGAATGGCGCATAGCAGAGCAGCGCCCAATACACCGGCAAC 9102 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| ||||| || |||||||| || || || ||||| | || | ||| | Sbjct 9101 TCCCATCATATGAAAGGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAAAGGATGAA 9042 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || || || ||||| || || || |||||||||| |||||||||||| Sbjct 9041 TCGAAATATCGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGTGG 8982 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| ||||| || | | || || || || |||||||||||| | ||| || || Sbjct 8981 ATAAATCAGGAATACAGAAACAAAAACAGCAATTGGAGCAGAGAATGCTATTGCATTATA 8922 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||||| | ||| | || | |||||||| | | |||||||||||| ||||| Sbjct 8921 AGGTCGCAATTGAACAGAGCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTCC 8862 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| |||| ||||| || | ||| |||| ||| || Sbjct 8861 GAAAGCACCGTGGAGAGCAACAAAAGTCCAAAGACCGCCTAATTGACACCAGCGAGTAAA 8802 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || |||| | | ||| | | | | |||| Sbjct 8801 ATCTCCTTGTGCTTCAGGACCCCATAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 8742 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || ||||||||||| || || | ||| ||| || | ||||| Sbjct 8741 AGTCGAAACTGCGGCGGTTAAGAAGTTGCAGCCTTCCAAATAGGAACTGGCTAATCCATG 8682 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || ||| ||||||||| || | | | ||| || Sbjct 8681 GGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 8622 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || || |||||||| |||| || || || || || ||| |||||| Sbjct 8621 ACAAGGAAAGAGCAATAGGCCAGACCAACCTACAAAAACGAATCGGTCCCTCCGTAACCA 8562 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | || |||||| Sbjct 8561 GTCATCCATAATATCAAA 8544 >seq1136 Length=8532 Score = 284 bits (314), Expect = 1e-71 Identities = 582/867 (67%), Gaps = 21/867 (2%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || || ||||| || || Sbjct 2816 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 2875 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || || || || | |||||| || || || ||||| Sbjct 2876 ATCTTGAGCCGCCATCCAAGCACGAATACCCTCGTTTAAAAGAATATTTTTTGTGTAGAA 2935 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || || ||||| || || | Sbjct 2936 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAAGCACG 2995 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || ||||| || || | || | || |||| | ||| | || || || Sbjct 2996 TAGGTTCAGGGCTAGGCCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTAC 3055 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 3056 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGAGA 3115 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| ||| |||||||| | || || || | || || Sbjct 3116 CCAAAAGCGGTTAGCGGTGACCATCGAATAGGTTTCTTCGGCTTGCGTTGGGTTAAAAGC 3175 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| || | ||| | || ||| || ||||| | || || Sbjct 3176 ACGGAATGT----GTTTGCA-----CCATCACCAT------------CTTCAAATAAAGT 3214 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || || ||||||||||| ||||| | || | || | || || ||||| Sbjct 3215 ATTTTCTACGGTAGCGCCATGAATGGCGCATAGCAGAGCAGCGCCCAATACACCGGCAAC 3274 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| ||||| || |||||||| || || || ||||| | || | ||| | Sbjct 3275 TCCCATCATATGAAAGGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAAAGGATGAA 3334 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || || || ||||| || || || |||||||||| |||||||||||| Sbjct 3335 TCGAAATATCGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGTGG 3394 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| ||||| || | | || || || || |||||||||||| | ||| || || Sbjct 3395 ATAAATCAGGAATACAGAAACAAAAACAGCAATTGGAGCAGAGAATGCTATTGCATTATA 3454 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||||| | ||| | || | |||||||| | | |||||||||||| ||||| Sbjct 3455 AGGTCGCAATTGAACAGAGCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTCC 3514 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| |||| ||||| || | ||| |||| ||| || Sbjct 3515 GAAAGCACCGTGGAGAGCAACAAAAGTCCAAAGACCGCCTAATTGACACCAGCGAGTAAA 3574 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || |||| | | ||| | | | | |||| Sbjct 3575 ATCTCCTTGTGCTTCAGGACCCCATAGTAACAACAAAGAATGCGCTAAACTATTAGCAGG 3634 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTT 123732 || || ||||| || ||||||||||| Sbjct 3635 AGTCGAAACTGCGGCGGTTAAGAAGTT 3661 >seq965 Length=51047765 Score = 255 bits (282), Expect = 7e-63 Identities = 358/500 (72%), Gaps = 2/500 (0%) Strand=Plus/Minus Query 124499 ATTAGAATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCA 124558 || || ||||| ||||| || ||||| || | ||| |||||||||||||| ||||| || Sbjct 18212009 ATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCT 18211950 Query 124559 AGTGGCATACCATCAGAGAATGAACCCTGACCAAATGGGTATACTAAGAATACAGCGAAT 124618 || |||||||||||||| || || ||||| | |||||| | ||||| ||||| Sbjct 18211949 AGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGTC 18211890 Query 124619 GCAGCAGATACTGGTGCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTAT 124678 || || | || || | | |||| |||||| |||||||||||||| |||| | | | Sbjct 18211889 GCTGCTGCAACAGGAGTTAAATATGCAACAGCAATCCAAGGACGCATACCTAGACGGAAA 18211830 Query 124679 GATAGTTCCCACTGTCTTCCCATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACC 124738 |||||||||| | |||||||| | | |||||| | |||||| | || | Sbjct 18211829 CTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAATTACGAAGTGTAGAACAATT 18211770 Query 124739 AACTGATAAGGACCACCATTATACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGG 124798 | || ||||||||| ||||| || |||||||||||||| | ||| |||||||| || ||| Sbjct 18211769 AGCTCATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATATCGGG 18211710 Query 124799 TAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTA 124858 || || || | || ||||| | || | |||| || || | ||| || || || || Sbjct 18211709 TAAAAATGCAAACCTATAGCTGTAGAAGTAGGAATAATCGCGCTAGAAATAATATTATTT 18211650 Query 124859 CCATATAAGAAAGAACCCGCTACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCT 124918 ||||| | | ||| || | | ||||| | || ||||| ||||| || ||||| || Sbjct 18211649 CCATAAAGTAGAGATCCAGAAGCAGGTTCACGAATACCGTCAATATCTACTGGAGGAGCA 18211590 Query 124919 GCAATAAATGCAACGATGAA-ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAAC 124977 |||||||| || | || || ||| | | ||| || | ||| || ||||| | ||| Sbjct 18211589 GCAATAAAGGCGATAATAAATACA-GAAGTTGCGGTCAATAAAGTAGGGATCATCAAAAC 18211531 Query 124978 ACCAAACCAACCAACATAAA 124997 |||||||||||||| |||| Sbjct 18211530 ACCAAACCAACCAATGTAAA 18211511 Score = 203 bits (224), Expect = 4e-47 Identities = 355/516 (69%), Gaps = 18/516 (3%) Strand=Plus/Minus Query 124499 ATTAGAATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCA 124558 || || ||||| ||||| || ||||| || | ||| |||||||||||||| ||||| || Sbjct 17867270 ATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCT 17867211 Query 124559 AGTGGCATACCATCAGAGAATGAACCCTGACCAAATGGGTATACTAAGAATACAGCGAAT 124618 || |||||||||||||| || || ||||| | |||||| | ||||| ||||| Sbjct 17867210 AGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAGATCAAGAAAACAGCAGTC 17867151 Query 124619 GCAGCAGATACTGGTGCTGAATAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTAT 124678 || || | || | | |||| | |||||| |||||||||||||| || | | | | Sbjct 17867150 GCTGCTGCAACAGTAGTTGAACATGCAACAACAATCCAAGGACGCATACCCAGACGGAAA 17867091 Query 124679 GATAGTTCCCACTGTCTTCCCATGTAT---GCTGAA-------------ATACCAATAAG 124722 |||||||||| | |||||||| ||| | | ||||| | Sbjct 17867090 TTAAGTTCCCACTCACGACCCATGTAACAAGCTAACCATGTAACAAGCTACACCAAGTAA 17867031 Query 124723 GAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCATTCATCAACAGTTGC 124782 |||||| | || | | || |||||||| ||||| || |||||||||||||| | ||| Sbjct 17867030 GAAGTGTAGAACAATTAGCTCATAAGGACTGCCATTGTATAACCATTCATCAACGGATGC 17866971 Query 124783 TGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACC 124842 |||||||| || ||||| || || | || ||||| || | |||| || ||||| Sbjct 17866970 CGCTTCCCATATCGGGTAAAAATGCAAACCTATAGCTGCAGAAGTAGGAATAATCGCACC 17866911 Query 124843 AGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCTCTGATTCCGTCGAT 124902 | | || || || || ||||| | | ||| || | || ||||| || ||||| || Sbjct 17866910 AAAAATAATATTATTTCCATAAAGTAGAGATCCAGAAACAGGTTCATGAATACCGTCAAT 17866851 Query 124903 ATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGCTGCTGTGAGTAAGC 124961 ||| | ||||| || ||||| || || | || || |||| | ||| || | ||| Sbjct 17866850 ATCTATTGGAGGAGCAGCAATTAAGGCTATAATAAATACAT-AAGTTGCGGTCAATAAAG 17866792 Query 124962 ATGGAATCATTAGAACACCAAACCAACCAACATAAA 124997 || ||||| | ||||||||||||||||| |||| Sbjct 17866791 TAGGGATCATCAAAACACCAAACCAACCAATGTAAA 17866756 Score = 107 bits (118), Expect = 2e-18 Identities = 200/291 (69%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || || ||||| || || Sbjct 16614726 TTAAAGAGCGTTTCCACAGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 16614785 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || ||| | |||||| || | || || | || | |||||| || || || ||||| Sbjct 16614786 ATCTTCAGCCGCCATCCAAGCACGAATACCCTTGTTTAAAAGAATTTTTTT-GTGTAGAA 16614844 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||||||||| | || || ||||| || ||||| || || | Sbjct 16614845 AGTCTCAAATTCAGGATCTTCTGCTGCACGGATTTCCTGAGAAACGAAGTCATAAGCACG 16614904 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || ||||| || || | || | | |||| | ||| | || || || Sbjct 16614905 TAGGTTCAGGGCTAGGCCAACTACTCCAAGAACACTCATCCATAAACCGGTTACTGGTAC 16614964 Query 123106 GAACAACAT-AAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAA 123155 || ||||| || || ||||| | | ||| || ||||| || | |||| Sbjct 16614965 AAATAACATAAAAAAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAA 16615015 >seq1074 Length=10062 Score = 215 bits (238), Expect = 6e-51 Identities = 510/768 (66%), Gaps = 27/768 (4%) Strand=Plus/Plus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || || ||||| || || Sbjct 3784 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 3843 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || || || || | |||||| || || || ||||| Sbjct 3844 ATCTTGAGCCGCCATCCAAGCACGAATACCCTCGTTTAAAAGAATATTTTTTGTGTAGAA 3903 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || || ||||| || || | Sbjct 3904 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAAGCACG 3963 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || ||||| || || | || | || |||| | ||| | || || || Sbjct 3964 TAGGTTCAGGGCTAGGCCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTAC 4023 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 4024 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGAGA 4083 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| ||| |||||||| | || || || | || || Sbjct 4084 CCAAAAGCGGTTAGCGGTGACCATCGAATAGGTTTCTTCGGCTTGCGTTGGGTTAAAAGC 4143 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| || | ||| ||| ||| | |||||| | || || Sbjct 4144 ACGGAATGT----GTTTG-----CACCATCACCA------------TCTTCAAATAAAGT 4182 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || || ||||||||||| ||||| | || | || | || || ||||| Sbjct 4183 ATTTTCTACGGTAGCGCCATGAATGGCGCATAGCAGAGCAGCGCCCAATACACCGGCAAC 4242 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| ||||| || |||||||| || || || ||||| | || | ||| | Sbjct 4243 TCCCATCATATGAAAGGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAAAGGATGAA 4302 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || || || ||||| || || || |||||||||| |||||||||||| Sbjct 4303 TCGAAATATCGCCGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGTGG 4362 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATG---CGAGTGCGTT 123522 ||| ||||| || | | || || || || ||||||||||| | | ||| || Sbjct 4363 ATAAATCAGGAATACAGAAACAAAAACAGCAAT-GGAGCAGAGAATGCTACTATTGCATT 4421 Query 123523 GTAAGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAG 123582 ||||||| | |||| | || | |||||||| | | | |||| ||||| | Sbjct 4422 ATAAGGTCGCAATTGAACAAACCGAGCAAGTTCAAATTGACGTAACTTGAACCCTAT-AT 4480 Query 123583 TCCAAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTG 123630 ||| || | || || || || | ||| | ||| ||||| || | ||| Sbjct 4481 TCCGAAAGCACCGTGAAAAGCAAAAAAATCCCA-AGACCGCCTAATTG 4527 >seq1 Length=28940139 Score = 86.0 bits (94), Expect = 7e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||||||||||| || | |||||||| ||||||||||| ||||| || ||||| || || Sbjct 3943763 ACACCAATAGGGCCCATACCAGGACCACCACCTCCATGCGGAATGCAAAATGTTTTGTGG 3943822 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCT 138297 | ||| ||||| || ||||| || ||| || || || ||| ||||| |||| Sbjct 3943823 AGATTGAGATGGCAAACATCAGCTCCAATGTAACCAGGGCTTGTCAGACCGACCT 3943877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578988282002960