Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq1113 522 3e-143 seq244 522 3e-143 seq1320 518 4e-142 seq993 518 4e-142 seq1136 470 2e-127 seq1074 396 3e-105 seq965 302 5e-77 seq1282 96.9 4e-15 seq1103 91.5 2e-13 >seq1113 Length=8127 Score = 522 bits (578), Expect = 3e-143 Identities = 706/981 (72%), Gaps = 2/981 (0%) Strand=Plus/Plus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 ||||| || || ||||| || |||||||| ||| | || |||| ||| ||| | || Sbjct 1855 GACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 1914 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| | || || ||| | ||||| || ||||| ||||| || | || Sbjct 1915 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCC 1974 Query 180171 TCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGC 180229 ||||||| | ||||| ||| ||||| | || || || || ||||| |||||| | Sbjct 1975 AGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAG 2033 Query 180230 TATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTG 180289 | | | |||||| | | |||| ||||||||||| | || || |||| || || Sbjct 2034 TTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCTG 2093 Query 180290 GTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGG 180349 ||| ||| | || || || |||| ||| || |||||||||||||| |||| ||||| || Sbjct 2094 GTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGG 2153 Query 180350 ATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTAT 180409 || ||| |||| || |||||||| || || | || | || ||||| ||||| || Sbjct 2154 TTTCATGTTACGTCAATTTGAACTTGCTCGCTCTGTTCAATTGCGACCTTATAATGCAAT 2213 Query 180410 TGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCA 180469 |||||||||| ||| || ||||| ||||| ||||| || || || ||||| ||||| Sbjct 2214 AGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCA 2273 Query 180470 GTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTT 180529 ||| ||||||||||||| || |||||| ||||| || || ||| ||||| | || || Sbjct 2274 GTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTTT 2333 Query 180530 TCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTAT 180589 | | || || || || || ||||| | |||||||| ||||||||||||||||| ||| | Sbjct 2334 TTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGT 2393 Query 180590 ACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGA 180649 | | || | || |||||| || || ||||||| || || || || || | | ||| Sbjct 2394 ATTGGGCGCTGCTCTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGA 2453 Query 180650 AGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTA 180709 |||||| || |||||||| || || ||| | ||||||||| || ||||| || Sbjct 2454 AGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTA 2513 Query 180710 CTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAA 180769 || |||||||| || |||||||| ||||| || ||||| || |||| ||||| || || Sbjct 2514 TTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAA 2573 Query 180770 GCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTAT 180829 || ||| | ||||| || ||||| ||||| || || | ||| |||||| || | Sbjct 2574 ACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCT 2633 Query 180830 TGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAG 180889 ||| | | || || || || ||||| |||||||| || ||||| || || ||| | Sbjct 2634 TGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCG 2693 Query 180890 AGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGG 180949 ||||| ||||||||||| || ||||| |||||||| || || || || || || || || Sbjct 2694 TGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGGG 2753 Query 180950 ACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGA 181009 | ||||| ||| |||| || ||||| || || |||||| | || |||||||| || Sbjct 2754 TATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 2813 Query 181010 AGTTCTACCAAGAGGTAACGC 181030 |||||||| | || ||||| Sbjct 2814 GGTTCTACCCCGTGGAAACGC 2834 >seq244 Length=4089 Score = 522 bits (578), Expect = 3e-143 Identities = 706/981 (72%), Gaps = 2/981 (0%) Strand=Plus/Minus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 ||||| || || ||||| || |||||||| ||| | || |||| ||| ||| | || Sbjct 3439 GACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 3380 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| | || || ||| | ||||| || ||||| ||||| || | || Sbjct 3379 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCC 3320 Query 180171 TCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGC 180229 ||||||| | ||||| ||| ||||| | || || || || ||||| |||||| | Sbjct 3319 AGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAG 3261 Query 180230 TATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTG 180289 | | | |||||| | | |||| ||||||||||| | || || |||| || || Sbjct 3260 TTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCTG 3201 Query 180290 GTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGG 180349 ||| ||| | || || || |||| ||| || |||||||||||||| |||| ||||| || Sbjct 3200 GTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGG 3141 Query 180350 ATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTAT 180409 || ||| |||| || |||||||| || || | || | || ||||| ||||| || Sbjct 3140 TTTCATGTTACGTCAATTTGAACTTGCTCGCTCTGTTCAATTGCGACCTTATAATGCAAT 3081 Query 180410 TGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCA 180469 |||||||||| ||| || ||||| ||||| ||||| || || || ||||| ||||| Sbjct 3080 AGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCA 3021 Query 180470 GTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTT 180529 ||| ||||||||||||| || |||||| ||||| || || ||| ||||| | || || Sbjct 3020 GTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTTT 2961 Query 180530 TCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTAT 180589 | | || || || || || ||||| | |||||||| ||||||||||||||||| ||| | Sbjct 2960 TTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGT 2901 Query 180590 ACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGA 180649 | | || | || |||||| || || ||||||| || || || || || | | ||| Sbjct 2900 ATTGGGCGCTGCTCTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGA 2841 Query 180650 AGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTA 180709 |||||| || |||||||| || || ||| | ||||||||| || ||||| || Sbjct 2840 AGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTA 2781 Query 180710 CTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAA 180769 || |||||||| || |||||||| ||||| || ||||| || |||| ||||| || || Sbjct 2780 TTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAA 2721 Query 180770 GCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTAT 180829 || ||| | ||||| || ||||| ||||| || || | ||| |||||| || | Sbjct 2720 ACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCT 2661 Query 180830 TGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAG 180889 ||| | | || || || || ||||| |||||||| || ||||| || || ||| | Sbjct 2660 TGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCG 2601 Query 180890 AGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGG 180949 ||||| ||||||||||| || ||||| |||||||| || || || || || || || || Sbjct 2600 TGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGGG 2541 Query 180950 ACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGA 181009 | ||||| ||| |||| || ||||| || || |||||| | || |||||||| || Sbjct 2540 TATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 2481 Query 181010 AGTTCTACCAAGAGGTAACGC 181030 |||||||| | || ||||| Sbjct 2480 GGTTCTACCCCGTGGAAACGC 2460 >seq1320 Length=5450 Score = 518 bits (574), Expect = 4e-142 Identities = 705/981 (72%), Gaps = 2/981 (0%) Strand=Plus/Plus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 ||||| || || ||||| || |||||||| ||| | || |||| ||| ||| | || Sbjct 4440 GACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 4499 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| | || || ||| | ||||| || ||||| ||||| || | || Sbjct 4500 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCC 4559 Query 180171 TCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGC 180229 ||||||| | ||||| ||| ||||| | || || || || ||||| |||||| | Sbjct 4560 AGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAG 4618 Query 180230 TATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTG 180289 | | | |||||| | | |||| ||||||||||| | || || |||| || || Sbjct 4619 TTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCTG 4678 Query 180290 GTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGG 180349 ||| ||| | || || || |||| ||| || |||||||||||||| |||| ||||| || Sbjct 4679 GTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGG 4738 Query 180350 ATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTAT 180409 || ||| |||| || |||||||| || || | || | || ||||| ||||| || Sbjct 4739 TTTCATGTTACGTCAATTTGAACTTGCTCGCTCTGTTCAATTGCGACCTTATAATGCAAT 4798 Query 180410 TGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCA 180469 |||||||||| ||| || ||||| ||||| ||||| || || || ||||| ||||| Sbjct 4799 AGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCA 4858 Query 180470 GTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTT 180529 ||| ||||||||||||| || |||||| ||||| || || ||| ||||| | || || Sbjct 4859 GTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTTT 4918 Query 180530 TCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTAT 180589 | | || || || || || ||||| | |||||||| ||||||||||||||||| ||| | Sbjct 4919 TTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGT 4978 Query 180590 ACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGA 180649 | | || | || |||||| || || ||||||| || || || || || | | ||| Sbjct 4979 ATTGGGCGCTGCTCTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGA 5038 Query 180650 AGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTA 180709 |||||| || |||||||| || || ||| | ||||||||| || ||||| || Sbjct 5039 AGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTA 5098 Query 180710 CTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAA 180769 || |||||||| || |||||||| ||||| || ||||| || |||| ||||| || || Sbjct 5099 TTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAA 5158 Query 180770 GCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTAT 180829 || ||| | ||||| || ||||| ||||| || || | ||| |||||| || | Sbjct 5159 ACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCT 5218 Query 180830 TGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAG 180889 ||| | | || || || || ||||| |||||||| || ||||| || || ||| | Sbjct 5219 TGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCG 5278 Query 180890 AGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGG 180949 ||||| ||||||||||| || ||||| |||||||| || || || || || || || || Sbjct 5279 TGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGGG 5338 Query 180950 ACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGA 181009 | ||||| ||| |||| || ||||| || || |||||| | || |||||||| || Sbjct 5339 TATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 5398 Query 181010 AGTTCTACCAAGAGGTAACGC 181030 | |||||| | || ||||| Sbjct 5399 GGATCTACCCCGTGGAAACGC 5419 >seq993 Length=11053 Score = 518 bits (574), Expect = 4e-142 Identities = 706/981 (72%), Gaps = 3/981 (0%) Strand=Plus/Plus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 ||||| || || ||||| || |||||||| ||| | || |||| ||| ||| | || Sbjct 8574 GACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 8633 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| | || || ||| | ||||| || ||||| ||||| || | || Sbjct 8634 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCC 8693 Query 180171 TCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGC 180229 ||||||| | ||||| ||| ||||| | || || || || ||||| |||||| | Sbjct 8694 AGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAG 8752 Query 180230 TATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTG 180289 | | | |||||| | | |||| ||||||||||| | || || |||| || || Sbjct 8753 TTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCTG 8812 Query 180290 GTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGG 180349 ||| ||| | || || || |||| ||| || |||||||||||||| |||| ||||| || Sbjct 8813 GTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGG 8872 Query 180350 ATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTAT 180409 || ||| |||| || |||||||| || || | || | || ||||| ||||| || Sbjct 8873 TTTCATGTTACGTCAATTTGAACTTGCTCGCTCTGTTCAATTGCGACCTTATAATGCAAT 8932 Query 180410 TGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCA 180469 |||||||||| ||| || ||||| ||||| ||||| || || || ||||| ||||| Sbjct 8933 AGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCA 8992 Query 180470 GTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTT 180529 ||| ||||||||||||| || |||||| ||||| || || ||| ||||| | || || Sbjct 8993 GTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTTT 9052 Query 180530 TCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTAT 180589 | | || || || || || ||||| | |||||||| ||||||||||||||||| ||| | Sbjct 9053 TTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGT 9112 Query 180590 ACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGA 180649 | | || | || |||||| || || ||||||| || || || || || | | ||| Sbjct 9113 ATTGGGCGCTGCTCTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGA 9172 Query 180650 AGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTA 180709 |||||| || |||||||| || || ||| | ||||||||| || ||||| || Sbjct 9173 AGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTA 9232 Query 180710 CTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAA 180769 || |||||||| || |||||||| ||||| || ||||| || |||| ||||| || || Sbjct 9233 TTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAA 9292 Query 180770 GCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTAT 180829 || ||| | ||||| || ||||| ||||| || || | ||| |||||| || | Sbjct 9293 ACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCT 9352 Query 180830 TGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAG 180889 ||| | | || || || || ||||| |||||||| || ||||| || || ||| | Sbjct 9353 TGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCG 9412 Query 180890 AGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGG 180949 ||||| ||||||||||| || ||||| |||||||| || || || || || || || || Sbjct 9413 TGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCT-TTAAACGAGGG 9471 Query 180950 ACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGA 181009 | ||||| ||| |||| || ||||| || || |||||| | || |||||||| || Sbjct 9472 TATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 9531 Query 181010 AGTTCTACCAAGAGGTAACGC 181030 |||||||| | || ||||| Sbjct 9532 GGTTCTACCCCGTGGAAACGC 9552 >seq1136 Length=8532 Score = 470 bits (520), Expect = 2e-127 Identities = 615/849 (72%), Gaps = 2/849 (0%) Strand=Plus/Minus Query 180183 GAAGG-TGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTC 180241 ||||| ||| ||||| | || || || || ||||| |||||| | | | | ||||| Sbjct 3670 GAAGGCTGC-AACTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTC 3612 Query 180242 TCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTGGTGCCAACTTGG 180301 | | | |||| ||||||||||| | || || |||| || ||||| ||| | || Sbjct 3611 TTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGG 3552 Query 180302 GGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACG 180361 || || |||| ||| || |||||||||||||| |||| ||||| || || ||| |||| Sbjct 3551 CGGTCTTTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACG 3492 Query 180362 CCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTATTGCATTCTCTGG 180421 || |||||||| || || | || | || ||||| ||||| || |||||||||| Sbjct 3491 TCAATTTGAACTTGCTCGCTCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGC 3432 Query 180422 TCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGTT 180481 ||| || ||||| ||||| ||||| || || || ||||| |||||||| ||||||| Sbjct 3431 TCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTT 3372 Query 180482 CTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTTCAGGGTTT 180541 |||||| || |||||| ||||| || || ||| ||||| | || ||| | || || || Sbjct 3371 CTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTT 3312 Query 180542 CCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGC 180601 || || ||||| | |||||||| ||||||||||||||||| ||| || | || | || Sbjct 3311 TCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGC 3252 Query 180602 ATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGAAGATGGAGAACA 180661 |||||| || || ||||||| || || || || || | | ||||||||| || Sbjct 3251 TCTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGG 3192 Query 180662 AGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTACTCTATGGTCAC 180721 |||||||| || || ||| | ||||||||| || ||||| || || |||||||| Sbjct 3191 TGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCAC 3132 Query 180722 TGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCA 180781 || |||||||| ||||| || ||||| || |||| ||||| || || || ||| | || Sbjct 3131 CGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACA 3072 Query 180782 TTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGG 180841 ||| || ||||| ||||| || || | ||| |||||| || |||| | | || Sbjct 3071 TTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGG 3012 Query 180842 TCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGA 180901 || || || ||||| |||||||| || ||||| || || ||| | ||||| ||||| Sbjct 3011 CCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGA 2952 Query 180902 TCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGACTACGTGCATG 180961 |||||| || ||||| |||||||| || || || || || || || || | ||||| || Sbjct 2951 TCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTG 2892 Query 180962 GTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCAAG 181021 | |||| || ||||| || || |||||| | || |||||||| || |||||||| | Sbjct 2891 GATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCG 2832 Query 181022 AGGTAACGC 181030 || ||||| Sbjct 2831 TGGAAACGC 2823 >seq1074 Length=10062 Score = 396 bits (438), Expect = 3e-105 Identities = 538/746 (72%), Gaps = 6/746 (1%) Strand=Plus/Minus Query 180288 TGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATT 180347 ||| | ||| | || || || ||| |||| | ||| | |||||||| |||| || | Sbjct 4533 TGGGGTCAATTAGGCGGTCT-TGGGATTTTTTTGCTTTTCACGGTGCTTTCGGAATA-TA 4476 Query 180348 GGATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCT 180407 || || | | |||| || |||||||| || || || || | || ||||| ||||| Sbjct 4475 GGGTTCAAGTTACGTCAATTTGAACTTGCTCGGTTTGTTCAATTGCGACCTTATAATGCA 4416 Query 180408 ATTG---CATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTG 180464 || | ||||||||| ||| || ||||| ||||| ||||| || || || ||||| Sbjct 4415 ATAGTAGCATTCTCTGCTCC-ATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTA 4357 Query 180465 GGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTA 180524 |||||||| ||||||||||||| || |||||| ||||| || || ||| ||||| | Sbjct 4356 GGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATC 4297 Query 180525 CTCTTTCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCT 180584 || ||| | || || || || || ||||| | |||||||| ||||||||||||||||| Sbjct 4296 CTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCC 4237 Query 180585 GGTATACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTG 180644 ||| || | || | || |||||| || || ||||||| || || || || || | Sbjct 4236 GGTGTATTGGGCGCTGCTCTGCTATGCGCCATTCATGGCGCTACCGTAGAAAATACTTTA 4177 Query 180645 TATGAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAA 180704 | ||||||||| || |||||||| || || ||| | ||||||||| || ||| Sbjct 4176 TTTGAAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAA 4117 Query 180705 ACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCT 180764 || || || |||||||| || |||||||| ||||| || ||||| || |||| ||||| Sbjct 4116 ACCTATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCC 4057 Query 180765 AACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCC 180824 || || || ||| | ||||| || ||||| ||||| || || | ||| |||||| Sbjct 4056 AATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGT 3997 Query 180825 TCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAG 180884 || |||| | | || || || || ||||| |||||||| || ||||| || || Sbjct 3996 GCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAA 3937 Query 180885 ATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAAT 180944 ||| | ||||| ||||||||||| || ||||| |||||||| || || || || || || Sbjct 3936 ATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAAC 3877 Query 180945 GAAGGACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCT 181004 || || | ||||| ||| |||| || ||||| || || |||||| | || |||||| Sbjct 3876 GAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCT 3817 Query 181005 GAAGAAGTTCTACCAAGAGGTAACGC 181030 || || |||||||| | || ||||| Sbjct 3816 GAGGAGGTTCTACCCCGTGGAAACGC 3791 >seq965 Length=51047765 Score = 302 bits (334), Expect = 5e-77 Identities = 365/494 (74%), Gaps = 2/494 (0%) Strand=Plus/Plus Query 178901 TTGGTTGGTTCGGTGTGCTGATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATC 178959 |||||||||| ||||| ||||||| ||||| || | | |||||| ||||| || || Sbjct 18211517 TTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATT 18211575 Query 178960 GTTGCTTTCGTAGCAGCACCTCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGT 179019 | || || | || || ||||| || ||||||||||| || |||||||| | |||| Sbjct 18211576 ATCGCCTTTATTGCTGCTCCTCCAGTAGATATTGACGGTATTCGTGAACCTGCTTCTGGA 18211635 Query 179020 TCACTCATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATT 179079 || || | |||||||| || || || ||| | || || | || | ||| | || || Sbjct 18211636 TCTCTACTTTATGGAAATAATATTATTTCTAGCGCGATTATTCCTACTTCTACAGCTATA 18211695 Query 179080 GGTCTACACTTCTACCCCATCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGT 179139 ||| | || || ||||| || |||||||| ||||| | ||||| ||| | || || || Sbjct 18211696 GGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGC 18211755 Query 179140 GGTCCTTTCCAACTGGTAGTCTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGT 179199 ||||||| | || | || | |||||| | || || | | || ||||| ||| Sbjct 18211756 GGTCCTTATGAGCTAATTGTTCTACACTTCGTAATTGGTGTAGCTTGTTACATGGGTCGT 18211815 Query 179200 GAGTGGGAACTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCA 179259 |||||||||||| || |||||||||||||||||| ||||| ||||||||| | | Sbjct 18211816 GAGTGGGAACTTAGTTTCCGTCTAGGTATGCGTCCTTGGATTGCTGTTGCATATTTAACT 18211875 Query 179260 CCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCT 179319 || || || || |||| ||| || ||| | |||| || |||||||||| ||| ||| Sbjct 18211876 CCTGTTGCAGCAGCGACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCT 18211935 Query 179320 GATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAA 179379 |||| ||||||||| || |||||||||||||| |||| |||| |||||||||| || || Sbjct 18211936 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAG 18211995 Query 179380 CACAACATCCTTAT 179393 |||||||||||||| Sbjct 18211996 CACAACATCCTTAT 18212009 Score = 251 bits (278), Expect = 9e-62 Identities = 363/510 (71%), Gaps = 18/510 (4%) Strand=Plus/Plus Query 178901 TTGGTTGGTTCGGTGTGCTGATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATC 178959 |||||||||| ||||| ||||||| ||||| || | | |||||| | ||| || || Sbjct 17866762 TTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TATGTATTTATT 17866820 Query 178960 GTTGCTTTCGTAGCAGCACCTCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGT 179019 | || || | || || ||||| | ||||||||||| || | |||||| || |||| Sbjct 17866821 ATAGCCTTAATTGCTGCTCCTCCAATAGATATTGACGGTATTCATGAACCTGTTTCTGGA 17866880 Query 179020 TCACTCATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATT 179079 || || | |||||||| || || || | |||||| || | || | ||| || || Sbjct 17866881 TCTCTACTTTATGGAAATAATATTATTTTTGGTGCGATTATTCCTACTTCTGCAGCTATA 17866940 Query 179080 GGTCTACACTTCTACCCCATCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGT 179139 ||| | || || ||||| || |||||||| ||||| | ||||| ||| | || || || Sbjct 17866941 GGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGC 17867000 Query 179140 GGTCCTTTCCAACTGGTAGTCTTCCACTTCCTTATCGGCAT--CT------ATGCCTAT- 179190 |||||| | || | || | |||||| | | || | || ||| || Sbjct 17867001 AGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGTTAGC 17867060 Query 179191 -------ATGGGACGTGAGTGGGAACTTTCTTACCGTCTAGGTATGCGTCCATGGATCTG 179243 ||||| ||||||||||||||| || |||||| ||||||||||| ||||| Sbjct 17867061 TTGTTACATGGGTCGTGAGTGGGAACTTAATTTCCGTCTGGGTATGCGTCCTTGGATTGT 17867120 Query 179244 TGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGG 179303 |||||||| || | | || || || |||| ||| || ||| | |||| || |||| Sbjct 17867121 TGTTGCATGTTCAACTACTGTTGCAGCAGCGACTGCTGTTTTCTTGATCTACCCAATCGG 17867180 Query 179304 TCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCT 179363 |||||| ||| ||||||| ||||||||| || |||||||||||||| |||| |||| | Sbjct 17867181 TCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGAT 17867240 Query 179364 TGTATTCCAAGCAGAACACAACATCCTTAT 179393 ||||||||| || || |||||||||||||| Sbjct 17867241 TGTATTCCAGGCTGAGCACAACATCCTTAT 17867270 Score = 156 bits (172), Expect = 5e-33 Identities = 203/278 (73%), Gaps = 2/278 (1%) Strand=Plus/Minus Query 180754 TTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTC-ATGTTGTTTGTGCCTGTTATGGGT 180812 |||| ||||| || || || ||| | |||||||| ||||| ||||| || || | ||| Sbjct 16615009 TTGCTTTTTCCAATAAACGTTGGTTACATTTTTTTTATGTTATTTGTACCAGTAACCGGT 16614950 Query 180813 CTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTC 180872 |||||| | |||| | |||| || || || ||||| |||||||| || ||| Sbjct 16614949 TTATGGATGAGTGTTCTTGGAGTAGTTGGCCTAGCCCTGAACCTACGTGCTTATGACTTC 16614890 Query 180873 GTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAAC 180932 || ||| || ||| | ||||||||||||||||| || ||||| ||||||| ||| || Sbjct 16614889 GTTTCTCAGGAAATCCGTGCAGCAGAAGATCCTGAATTTGAGACTTTCTACA-CAAAAAA 16614831 Query 180933 ATCCTATTGAATGAAGGACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAAC 180992 || || || || | || | ||||| ||| |||| ||| ||||| || || |||||| Sbjct 16614830 ATTCTTTTAAACAAGGGTATTCGTGCTTGGATGGCGGCTGAAGATCAGCCTCATGAAAAC 16614771 Query 180993 TTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAACGC 181030 | || |||||||| || |||||||| | || ||||| Sbjct 16614770 CTTATATTCCCTGAGGAGGTTCTACCCTGTGGAAACGC 16614733 >seq1282 Length=25111302 Score = 96.9 bits (106), Expect = 4e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177381 GACGATCAGTACATCCTCGACGCCGCTGAAGAAGCAGGTGTTGATATTAATTACTCATGC 177440 || || |||||||||||||| || ||||| |||||||| || || | || || ||| Sbjct 19546181 GAAGACCAGTACATCCTCGATGCAGCTGAGGAAGCAGGAGTCGACCTGCCCTATTCCTGC 19546122 Query 177441 CGCGCTGGTGCTTGTTCATCCTGTGCTGGTAAACTTGAGAGTGGTAGTGTAGATCAAAGC 177500 |||||||||||||| || | |||||||| || | | | |||| || || || Sbjct 19546121 CGCGCTGGTGCTTGCTCGACGTGTGCTGGGAAGTTGGTGTCTGGTTCAGTTGACCAGTCA 19546062 Query 177501 GATCAATCGTTCTTGGATGACGATCAAATGGAGTCAGGATTTATTCTGACCTGTGTGTCA 177560 ||| || ||| | |||||| ||||||||||| | || | | | ||||| || | ||| Sbjct 19546061 GATGGTTCCTTCCTCGATGACAATCAAATGGAGGCTGGTTATCTGCTGACTTGCATTTCA 19546002 Query 177561 TATCCCAC 177568 || || || Sbjct 19546001 TACCCGAC 19545994 >seq1103 Length=43299053 Score = 91.5 bits (100), Expect = 2e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 177393 ATCCTCGACGCCGCTGAAGAAGCAGGTGTTGATATTAATTACTCATGCCGCGCTGGTGCT 177452 || || || || ||||||||||| || ||||| || ||||||||| | ||||| ||| Sbjct 8435657 ATTCTTGATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGGGGCT 8435598 Query 177453 TGTTCATCCTGTGCTGGTAAACTTGAGAGTGGTAGTGTAGATCAAAGCGATCAATCGTTC 177512 || || |||||| |||| ||| ||| | ||| | || || || || ||| || Sbjct 8435597 TGCTCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTT 8435538 Query 177513 TTGGATGACGATCAAATGGAGTCAGGATTTATTCTGACCTGTGTGTCATATCCCACCAGC 177572 ||||||| |||||||||| ||| ||| |||| || |||| | ||||| || || Sbjct 8435537 CTGGATGATGATCAAATGGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGT 8435478 Query 177573 GAT 177575 ||| Sbjct 8435477 GAT 8435475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610318934490240