Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1030 84.2 2e-11 >seq1030 Length=25649276 Score = 84.2 bits (92), Expect = 2e-11 Identities = 104/140 (74%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 23501 ACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAA 23560 |||| | || || ||||| || || || || ||||| | ||||| || || || | Sbjct 1352124 ACAACAGGCACGCGAAATCGCAGTGGAGACCCTCATCTCGCGAGATCAACTCGTTTGAGA 1352065 Query 23561 ATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT-CCG 23619 |||||||||| |||||||| || || ||||| | ||||||||| || ||||| | || Sbjct 1352064 ATGTTAATCCCGGCATTAACCCGCGCTTTTTGAGCCAAAATATCGC-GCAAAAACTCCCT 1352006 Query 23620 GAAAAGAAAATACCCTCAAC 23639 || |||||||| ||||| || Sbjct 1352005 GAGAAGAAAATCCCCTCCAC 1351986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521478886997200