Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20maxima_20[genbank_20GCA_5F002006925.1_202017-03-07] 1,504 sequences; 345,757,338 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq6 82.4 7e-11 >seq6 Length=23636167 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| |||||| ||||||| | ||||| || || || ||| |||| || | | Sbjct 5506840 ATGCAGATATTCGTCAAAACCCTAACGGGAAAGACGATCACCCTCGAAGTCGAGAGCTCC 5506899 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | | | | ||| || || || || ||||| | || || || Sbjct 5506900 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAG 5506959 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || |||||||| || || ||||| || || | ||| |||||||||||||| Sbjct 5506960 CAGAGGCTGATCTTTGCCGGAAAGCAACTCGAGGACGGCCGCACTCTGGCCGATTACAAT 5507019 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTG 29171 || ||||||||||| || |||||| | ||| Sbjct 5507020 ATCCAGAAGGAATCAACACTTCACCTCGTG 5507049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428328148601120