Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20maxima_20[genbank_20GCA_5F002006925.1_202017-03-07] 1,504 sequences; 345,757,338 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 1e-11 >seq1 Length=32082701 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 248783 TGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGC 248842 ||||| | | ||| ||||| | ||||| || || |||| |||| |||||||| | Sbjct 28519330 TGGACAGTGAGATCATCTACGACCGGGATTTTGACTATGATTATTTTGGCTTCAAAACCC 28519389 Query 248843 TGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGT 248902 |||||| || || ||| | || | | || || | || ||| || || || |||| Sbjct 28519390 TGGAGAGGTCCTACCTCTTGAAGGTCCAAGGAAAAGTTGTAGAAAGACCCCAACATATGT 28519449 Query 248903 TGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGA 248942 ||||| | || ||||| |||||||||||||||||||| || Sbjct 28519450 TGATGAGGGTTGCTGTTGGGATTCACAAGGATGACATTGA 28519489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073745708521472