Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20maxima_20[genbank_20GCA_5F002006925.1_202017-03-07] 1,504 sequences; 345,757,338 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7 271 7e-68 seq6 123 2e-23 seq2 98.7 9e-16 seq5 93.3 4e-14 seq1288 91.5 1e-13 >seq7 Length=22269817 Score = 271 bits (300), Expect = 7e-68 Identities = 610/899 (68%), Gaps = 27/899 (3%) Strand=Plus/Minus Query 57528 AATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAA 57587 |||||| | ||||| |||||| |||||| | || ||| | |||||| | |||||||| Sbjct 8165747 AATCCCGATCGATTTTGCATGTTCCCGATTCAGTACCCACAAATTTGGGAAATGTACAAG 8165688 Query 57588 AAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGAT 57647 || || ||||| ||||||||||||| || ||||| || || || | ||||| || | Sbjct 8165687 AAAGCCGAAGCGTCGTTTTGGACCGCTGAGGAAGTTGATCTTTCGCAAGATCTCCGCCAC 8165628 Query 57648 TGGGATTCCCTCAAAGAATCTGA-GAGAA--ATTTTATTAAACACGTGTTGGCGTTTTTC 57704 ||||| |||| | | |||| ||||| | || | | |||||| | || || ||| Sbjct 8165627 TGGGAGGCCCTAACCG---CTGACGAGAAGCACTTCGTCACGCACGTGCTCGCCTTCTTC 8165571 Query 57705 GCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTT-TCACAAGAAGTGCA 57763 || || ||||| || || || |||||| | | || ||| || | || || || || Sbjct 8165570 GCAGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCGGAAGGTTCATGACG-GAGGTCCA 8165512 Query 57764 AGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGA 57823 || | |||||| | ||| ||||| || ||| | ||||| || ||| | || || || Sbjct 8165511 GGTCGCCGAGGCGCGTGCCTTCTACGGCTTCCAAATCGCCATCGAGAACATCCACTCCGA 8165452 Query 57824 AATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGA---GAAACGTAGACT 57880 |||||| ||||| || | || || ||| | || ||| |||||| ||| ||| || Sbjct 8165451 AATGTACTCGCTGCTTCTAGAAACTTACATCAAAGACTCCGACGAAAAGAACCGT---CT 8165395 Query 57881 GTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAAT 57939 || |||| ||||| || | ||| ||| |||| ||||| || |||| | | || | Sbjct 8165394 CTTTCACGCCATCGAGACGGTTCCCTGCG-TCGCAAAGAAAGCCACGTGGGCGTTAAATT 8165336 Query 57940 GGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAG 57999 |||| | || | ||| || ||||| ||||| |||||||||| || ||| || | Sbjct 8165335 GGATCGA---CGGCTCGGAGACTTTCGCGGAGAGATTAATCGCGTTTGCTTGCGTGGAGG 8165279 Query 58000 GTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGC 58059 | || ||||| || || || ||| || ||||||||| | || || ||||| | |||| Sbjct 8165278 GGATTTTCTTCTCAGGGAGTTTTTGCGCGATATTTTGGCTCAAAAAGCGCGGGTTAATGC 8165219 Query 58060 CCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTG 58119 | || | || || ||||||||||| || || || ||||||||||| ||||| | Sbjct 8165218 CGGGATTAACATTCTCAAACGAGTTGATCTCTCGAGATGAGGGTCTCCACTGCGATTTCG 8165159 Query 58120 CGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG-GGATCGCATCTTGGACATT 58178 ||||||| ||||| | |||| | || | | ||| ||| | | || | || Sbjct 8165158 CGTGCCTGTTGTACAGT-TTATTGAGGACGAAGCTAAGCGAGGAGAGAGTGAAGG-CGTT 8165101 Query 58179 A-TCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCAT 58237 | | | |||||||| | ||| || | |||||||| ||| || || ||| || | Sbjct 8165100 AGTGAAGGAGGCGGTGGAGATAGAGAGAGAGTTTGTGTGCGATGCGCTGCCGTGCGCGTT 8165041 Query 58238 GCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTT 58297 | | || ||||| || |||||| ||||||| |||||||| || || ||| | || Sbjct 8165040 GGTGGGGATGAATGGAGAATTGATGAGTCAGTACATAGAGTTTGTCGCGGATAGATTGTT 8164981 Query 58298 GCTCGAACTGATTGG--AGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAAT 58355 | | || | || | | | ||| | ||||| ||||||| ||| | Sbjct 8164980 GGGTGCGCT--TGGGTACGGGAAGCTGTACGGTGTGGGGAATCCTTTTGATTGGATGGAG 8164923 Query 58356 CTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 |||||||||||| | || ||||| || || || ||||| | |||| | ||||||||||| Sbjct 8164922 CTGATCTCGCTCCAAGGGAAGACTAATTTCTTTGAAAAGAGAGTTGGGGAATATCAAAA 8164864 >seq6 Length=23636167 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || || || ||||| ||| |||| || || || Sbjct 5507067 CATGCAGATATTCGTCAAAACCCTAACGGGAAAGACGATTACCCTCGAGGTCGAGAGCTC 5507126 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | ||||| | || |||||||||||| | ||||| ||||| Sbjct 5507127 CGACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCA 5507186 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || ||||||||||| ||| |||| || | ||| | ||||| || Sbjct 5507187 GCAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGAAGGACGCTCGCGGATTACAA 5507246 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||| || ||||| |||||||||||||| | | |||||||| || Sbjct 5507247 CATTCAGAAGGAATCAACTCTTCATCTGGTGTTGCGTCTGAGGGGTGG 5507294 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||||||||| || || ||||||||| | || || || || Sbjct 3889327 CATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTC 3889386 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || || || |||||||||||| | || || ||||| Sbjct 3889387 CGACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGGATCCCCCCGGACCA 3889446 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||| ||||| ||| |||| ||| || || ||||||||| Sbjct 3889447 GCAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGATTATAA 3889506 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || ||||| || || || || || | | |||||||| || Sbjct 3889507 CATCCAGAAGGAATCCACGCTCCACCTTGTGTTGCGCCTGAGGGGAGG 3889554 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || || || || || || || ||||| || |||||| |||| || || Sbjct 4424003 AAGATGCAGATATTTGTGAAAACCCTCACCGGCAAGACAATCACCCTCGAAGTGGAGAGC 4424062 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| | || ||||||||| || | ||||| ||| Sbjct 4424063 TCCGACACAATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGAC 4424122 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || || || || || || | |||||| ||| || |||||| Sbjct 4424123 CAGCAGCGTCTCATCTTTGCCGGGAAGCAACTCGAAGACGGCCGCACTTTGGCCGATTAC 4424182 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||||||||||||||||| ||| | ||||| || || || || Sbjct 4424183 AACATTCAAAAAGAATCCACTTTGCATCTTGTCCTCAGGCT 4424223 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || ||||| || || |||||||| | || || || || Sbjct 4424234 ATGCAGATCTTCGTCAAAACCCTGACGGGAAAGACGATCACTCTGGAAGTCGAGAGCTCT 4424293 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | ||| |||||||||||| | || || || ||| Sbjct 4424294 GACACCATTGACAACGTCAAGGCAAAAATCCAGGACAAGGAAGGGATACCACCTGATCAG 4424353 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || ||||| || ||| |||| || | ||| | ||||| ||| Sbjct 4424354 CAGCGCCTGATCTTTGCTGGGAAGCAGCTGGAGGATGGAAGGACGCTTGCGGATTACAAC 4424413 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || ||||||||||||||||| | | ||||||||||||| Sbjct 4424414 ATTCAGAAGGAGTCGACTCTTCATCTGGTGTTGCGTCTGAGGGGCGGTA 4424462 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| || || || ||||| || || | || ||||| || Sbjct 4326640 CATGCAGATATTTGTTAAGACCCTTACTGGGAAAACAATTACTTTGGAAGTTGAGAGCTC 4326699 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| | ||| || |||||||| | || || || || Sbjct 4326700 AGACACAATTGACAATGTCAAGGCAAAAATCCAAGATAAGGAAGGAATTCCACCGGATCA 4326759 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || ||||||||||||||| | || || | |||| | |||||||| Sbjct 4326760 GCAGCGTTTGATCTTCGCTGGCAAACAGCTTGAGGATGGAAGGACTCTTGCGGATTATAA 4326819 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || ||||| ||||||||||| || | |||||||| |||| Sbjct 4326820 CATCCAGAAGGAGTCGACCCTTCATCTGGTTCTGCGCCTGAGGGGTGGTA 4326869 Score = 105 bits (116), Expect = 6e-18 Identities = 155/218 (71%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 31189 AAAC-ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || ||||| || || || |||| || || Sbjct 5506379 AAACGATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATTACTCTCGAAGTCGAGA 5506438 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 ||||||| |||| | ||||| | || ||||||||||| | || || | Sbjct 5506439 GCTCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCTCCGG 5506498 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 ||||||||||||| || |||||||| |||||| | ||||| || || ||||| Sbjct 5506499 ACCAGCAGCGTCTGATCTTCGCTGGAAAACAGCTCGAAGATGGCCGCACCTTGGCCGATT 5506558 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 | || || ||||| |||||||| |||||||| || ||| Sbjct 5506559 ACAATATCCAAAAGGAATCGACGCTTCATCTTGTGCTT 5506596 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || || || ||||| ||| |||| || || || Sbjct 4366044 CATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTC 4366103 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || | || |||||||| || | || |||||||| Sbjct 4366104 CGACACGATCGATAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCA 4366163 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||| || || || ||||||||| || || |||||| || Sbjct 4366164 GCAGAGGCTGATCTTCGCCGGAAAGCAATTGGAAGACGGCCGCACCTTGGCCGATTACAA 4366223 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||| ||||||||||| || | ||||| || || || || Sbjct 4366224 CATCCAAAAAGAATCCACCTTGCATCTTGTCCTCAGGCT 4366262 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || ||||| || || ||||| ||| |||| || || || Sbjct 4416581 CATGCAGATCTTCGTCAAAACCCTGACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTC 4416640 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || | || |||||||| || | || |||||||| Sbjct 4416641 CGACACGATCGATAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCA 4416700 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||| || || || | |||||| ||| || |||||| || Sbjct 4416701 GCAGAGGCTGATCTTCGCCGGAAAGCAACTCGAAGACGGCCGGACCTTGGCCGATTACAA 4416760 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||| ||||||||||| || | ||||| || || || || Sbjct 4416761 CATCCAAAAAGAATCCACCTTGCATCTTGTCCTCAGGCT 4416799 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || || || ||||||||| |||| || || || Sbjct 5506839 CATGCAGATATTCGTCAAAACCCTAACGGGAAAGACGATCACCCTCGAAGTCGAGAGCTC 5506898 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | ||||| | || |||||||||||| | ||||| ||||| Sbjct 5506899 CGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCA 5506958 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || || || || || | || ||| ||| || |||||| || Sbjct 5506959 GCAGAGGCTGATCTTTGCCGGAAAGCAACTCGAGGACGGCCGCACTCTGGCCGATTACAA 5507018 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || ||||| || ||||| || || ||| Sbjct 5507019 TATCCAGAAGGAATCAACACTTCACCTCGTGCTT 5507052 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || ||| |||| ||||| || ||||| |||| || || ||| Sbjct 3889100 ATGCAGATCTTTGTGAAAACTTTGACCGGCAAGACCATCACTCTCGAGGTGGAGAGCTCC 3889159 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||||||||| | || || |||||| Sbjct 3889160 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCACCGGACCAG 3889219 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| || || ||| | || ||| || || ||||| ||| Sbjct 3889220 CAGCGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCGGATTACAAC 3889279 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || |||||||| || || || || Sbjct 3889280 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCT 3889311 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || || ||||||||| | || || || ||| Sbjct 3889556 ATGCAGATCTTCGTCAAGACGTTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCC 3889615 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || |||||| || || | || || |||||| Sbjct 3889616 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAAGAGGGGATTCCTCCGGACCAG 3889675 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||| ||||| ||| | || || |||| | |||||| ||| Sbjct 3889676 CAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTTGCCGATTACAAC 3889735 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||||| || || ||||| || || || || Sbjct 3889736 ATTCAAAAGGAGTCCACTCTCCACCTTGTCCT 3889767 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || ||||| || || || |||| ||||| || Sbjct 5506611 CATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATTACTCTCGAAGTTGAGAGCTC 5506670 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | ||||| | || |||||||||||| | ||||| ||||| Sbjct 5506671 CGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCA 5506730 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||| || || || | || ||| || || ||||| || Sbjct 5506731 GCAGAGGCTGATCTTCGCAGGAAAGCAACTCGAGGACGGCCGCACCTTGGCTGATTACAA 5506790 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || ||||| |||||||| || || ||| Sbjct 5506791 TATCCAGAAGGAATCAACTCTTCACCTCGTGCTT 5506824 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| || || || || |||||||||||||| |||| || || Sbjct 4365814 AATATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACGATCACTCTCGAAGTGGAGAGC 4365873 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | ||||| | || ||||||||| || | || || || Sbjct 4365874 TCTGACACAATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGAT 4365933 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||| || || || | ||||| || || |||||| Sbjct 4365934 CAGCAGCGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTAC 4365993 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || || || || || || || || || || | ||||| Sbjct 4365994 AACATCCAGAAGGAGTCAACGCTCCACCTCGTGCTCAGGCTCCGTGGCGG 4366043 >seq2 Length=53008150 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||||| || || ||||| || ||| | || |||||| ||| Sbjct 27088352 ATGCAAATCTTTGTGAAGACTCTCACCGGAAAAACCATAACCCTTGAGGTTGAAAGCTCC 27088293 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | |||||| | || |||||||||||| | || || || ||| Sbjct 27088292 GATACCATCGATAATGTCAAAGCTAAGATCCAGGACAAGGAAGGGATTCCACCAGATCAG 27088233 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || ||||| |||||| | || || || | |||||||||| Sbjct 27088232 CAGAGGCTTATCTTTGCTGGTAAACAGCTTGAGGATGGGCGCACACTCGCCGATTATAAC 27088173 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || ||||| || || |||| ||| | || ||||| || Sbjct 27088172 ATCCAGAAGGAGTCGACCCTGCACTTGGTTCTTCGTCTTAGGGGTGG 27088126 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || |||||||| || || || || || || ||| | || || ||| || Sbjct 27088125 CATGCAAATCTTTGTAAAGACCCTCACTGGAAAGACCATTACCCTTGAGGTGGAAAGCTC 27088066 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | |||||| | ||| ||| |||||||| | || || ||||| Sbjct 27088065 GGACACCATTGACAATGTCAAAGCCAAAATTCAGGATAAGGAAGGGATCCCACCAGACCA 27088006 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||| | || || || ||||||||||| | || || | | | || | || || | Sbjct 27088005 GCAAAGGCTCATCTTTGCTGGCAAACAACTTGAGGA-TGGACGCACACTTGCAGACTACA 27087947 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| || || ||||| || |||||| |||||||| | || ||||| |||| Sbjct 27087946 ACATCCAGAAGGAATCAACCCTTCATTTGGTACTTCGTCTCAGGGGTGGTA 27087896 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || ||||| || ||||| || || ||| | || |||||| ||| Sbjct 27128218 ATGCAAATCTTTGTGAAAACTCTCACCGGCAAGACAATAACCCTTGAGGTTGAAAGCTCC 27128159 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | || |||||||||||| | || || || ||| Sbjct 27128158 GACACCATTGATAATGTAAAAGCCAAGATCCAGGACAAGGAAGGGATCCCACCAGATCAG 27128099 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || ||||| |||||| | || || | || | || ||||| Sbjct 27128098 CAGAGGCTTATCTTTGCTGGTAAACAGCTCGAGGATGGTCGCACACTTGCTGACTATAAT 27128039 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| || || || |||| ||| |||| ||||| |||| Sbjct 27128038 ATCCAGAAGGAATCAACCCTCCACTTGGTCCTTCGACTTAGGGGTGGTA 27127990 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || |||||||| || || || || || |||||| | || || ||| ||| Sbjct 27084727 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCC 27084668 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | ||| |||||||||||| | || || |||||| Sbjct 27084667 GACACCATTGACAATGTCAAAGCCAAAATTCAGGACAAGGAAGGGATCCCACCAGACCAG 27084608 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || || ||||||||||| | || || || | ||| |||||| Sbjct 27084607 CAAAGGCTTATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACCCTTGCCGACTATAAC 27084548 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || ||||| || Sbjct 27084547 ATTCAGAAGGAGTCCACACTCCACCTGGTCCT 27084516 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||||| || ||||| || || ||| | || ||||| || Sbjct 27084043 ATGCAAATCTTTGTTAAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCG 27083984 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | || ||| | || |||||||||||| | || || |||||| Sbjct 27083983 GATACTATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCCACCTGACCAG 27083924 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || ||||| || ||| | ||||| | ||| | ||| || || Sbjct 27083923 CAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGAAGGACCCTCGCCGACTACAAT 27083864 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || ||||| || |||| ||| | || | || |||| Sbjct 27083863 ATTCAGAAGGAGTCCACTCTACACTTGGTCCTTCGCCTTCGTGGAGGTA 27083815 >seq5 Length=49531769 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| || || || || || || || || || | || || || | Sbjct 45288493 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATAACGTTGGAGGTGGAGTCC 45288552 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| || || ||||||||| ||| | || || ||| Sbjct 45288553 TCCGACACAATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCGGAC 45288612 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| ||||| ||| | |||||| || || ||| || Sbjct 45288613 CAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGGCGAACCTTGGCCGACTAC 45288672 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || || || |||||||| || ||||| ||| Sbjct 45288673 AATATCCAGAAGGAGTCGACTCTGCACCTGGTGCTT 45288708 >seq1288 Length=1199740 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 ||||||||||||| | || || || |||||| | || || || ||||| ||||| ||||| Sbjct 1162950 GGACAAGGAAGGCATTCCTCCGGATCAGCAGAGACTGATTTTTGCTGGTAAACAATTGGA 1162891 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| | || | ||||||||||||||||| || ||||| ||||| |||| || Sbjct 1162890 AGATGGCAGAACGCTTGCAGATTATAACATTCAAAAGGAGTCGACGCTTCACTTGGTCCT 1162831 Query 31405 TAGACTGAGGGGCGG 31419 || || ||||| || Sbjct 1162830 GAGGCTCAGGGGAGG 1162816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445758019591680