Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20maxima_20[genbank_20GCA_5F002006925.1_202017-03-07] 1,504 sequences; 345,757,338 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq1288 84.2 2e-11 >seq1288 Length=1199740 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 19971 TTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATG 20029 || ||||| ||||||| | | ||||| ||||| || || || || || ||||| ||| Sbjct 1162804 TTGATCATAGTTCCTCCCCTGAGCCTCAGGACCAAGTGAAGCGTCGACTCCTTTTGAATG 1162863 Query 20030 TTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGT 20089 || ||||| | | ||| | ||||||||||||||| || ||| |||| || ||||| Sbjct 1162864 TTATAATCTGCAAGCGTTCTGCCATCTTCCAATTGTTTACCAGCAAAAATCAGTCTCTGC 1162923 Query 20090 TGATCGACGGGCACGCCTTCTTTGTC 20115 ||||| || | |||||| ||||| Sbjct 1162924 TGATCCGGAGGAATGCCTTCCTTGTC 1162949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419579508966624