Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20maxima_20[genbank_20GCA_5F002006925.1_202017-03-07] 1,504 sequences; 345,757,338 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq5 131 2e-25 seq6 114 1e-20 seq8 107 2e-18 seq2 107 2e-18 seq7 104 3e-17 seq3 96.9 4e-15 seq1 95.1 1e-14 seq4 91.5 2e-13 >seq5 Length=49531769 Score = 131 bits (144), Expect = 2e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| |||| || |||||| || |||||||| || |||| || ||| |||| || Sbjct 45288705 CACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCGGCCAAGGTTCGCCCGTCTTC 45288646 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||||| || ||||| ||||| ||||||||||| | ||| | || |||||||||| Sbjct 45288645 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 45288586 Query 42119 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177 ||| || |||| ||| | | | |||||| || ||||| || | ||| ||||| | Sbjct 45288585 GATCTTCGCCTTGA-CGTTGTCGATTGTGTCGGAGGACTCCACCTCCAACGTTATGGTCT 45288527 Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 | |||||||| || || || ||||| ||||| || Sbjct 45288526 TACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 45288493 >seq6 Length=23636167 Score = 114 bits (126), Expect = 1e-20 Identities = 156/214 (73%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 |||||| ||| || |||||||| |||||||| |||| ||| || |||| || || || Sbjct 4424209 ATGCAAAGTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTG 4424150 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||| || || || ||||| ||||||||||| | || | | |||||||||| ||| || Sbjct 4424149 CTTCCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTT 4424090 Query 42125 TTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 42180 |||| ||| | | | ||||| |||| ||||| |||| ||||| || |||| Sbjct 4424089 GGCCTTGA-CGTTGTCGATTGTGTCGGAGCTC---TCCACTTCGAGGGTGATTGTCTTGC 4424034 Query 42181 CCGTTAGCGTCTTTACAAAGATTTGCATTTTCAC 42214 | || || || || ||||| || ||||| ||||| Sbjct 4424033 CGGTGAGGGTTTTCACAAATATCTGCATCTTCAC 4424000 Score = 113 bits (124), Expect = 5e-20 Identities = 145/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| |||| || ||| |||| || |||||||| || ||||| Sbjct 3889291 CTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAA 3889232 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | ||| | | ||||||||| ||| || |||| ||| Sbjct 3889231 GATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 3889173 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| ||||| |||| |||||||| ||||| || | || | Sbjct 3889172 TGTCGATCGTGTCGGAGCTC---TCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTT 3889116 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 3889115 TCACAAAGATCTGCAT 3889100 Score = 113 bits (124), Expect = 5e-20 Identities = 167/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || | ||||||||||| ||| | || |||||| ||||| |||||||| || Sbjct 4424461 ACCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGC 4424402 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | || || |||||||| ||||| || || || |||||||| || | ||| Sbjct 4424401 AAGCGTCCTTCCATCCTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGG 4424342 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | ||||||||| ||||||| |||| ||| | | | ||||| |||| | Sbjct 4424341 TATCCCTTCCTTGTCCTGGATTTTTGCCTTGA-CGTTGTCAATGGTGTCAGAGCTC---T 4424286 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 | || || | ||||| || || ||||| || || || || ||||| |||||| Sbjct 4424285 CGACTTCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCATT 4424233 Score = 105 bits (116), Expect = 7e-18 Identities = 144/197 (73%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| |||||||| || |||||||| | || || |||||||| || ||||| Sbjct 3889747 CTCCTTTTGAATGTTGTAATCGGCAAGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAA 3889688 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| | ||||||||| | || | | ||| |||||| ||| || || | ||| Sbjct 3889687 GATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTTGTCCTGGATCTTGGCCTTCA-CGT 3889629 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| ||||| || | ||||| || || || || | ||||| Sbjct 3889628 TGTCGATCGTGTCGGAGCTC---TCCACCTCCAGGGTGATCGTCTTCCCGGTCAACGTCT 3889572 Query 42193 TTACAAAGATTTGCATT 42209 | || ||||| |||||| Sbjct 3889571 TGACGAAGATCTGCATT 3889555 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || || | ||||||||||| ||| | || ||||| ||||| |||||||| || Sbjct 5507294 CCACCCCTCAGACGCAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCG 5507235 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | || || |||||||| |||||||| || | ||||||||||| | || Sbjct 5507234 AGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGA 5507175 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 42157 | | ||||||||| ||| || |||| ||| | | | |||||| |||| || Sbjct 5507174 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCGGAGCTC---TC 5507119 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| || || || || |||||||| || || || || || ||||| Sbjct 5507118 GACCTCGAGGGTAATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 5507068 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || |||||||||||||||| || || |||| || || ||||| || ||||| Sbjct 5506802 TCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCTGCGAAG 5506743 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || | ||||||||| | || | | ||||||||| ||| || |||| ||| Sbjct 5506742 ATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 5506684 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | |||||| |||| || || |||| || ||||| ||||| ||||| || || Sbjct 5506683 GTCGATCGTGTCGGAGCTC---TCAACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTT 5506627 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 5506626 CACGAAGATCTGCAT 5506612 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| ||||||||||| |||| || || | || || ||||| || |||||||| Sbjct 5506574 TCCTTTTGGATATTGTAATCGGCCAAGGTGCGGCCATCTTCGAGCTGTTTTCCAGCGAAG 5506515 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||||||||| | || | | |||||||| ||| || |||| ||| Sbjct 5506514 ATCAGACGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 5506456 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| |||| || || |||| || ||||| ||||| ||||| || || Sbjct 5506455 GTCGATGGTGTCGGAGCTC---TCGACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTT 5506399 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 5506398 CACGAAGATCTGCAT 5506384 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || ||||||||||| |||||||| || |||| || || ||||| || || || Sbjct 5507030 TCCTTCTGGATATTGTAATCGGCCAGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCAAAG 5506971 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || | ||||||||| | || | | ||||||||| ||| || |||| ||| Sbjct 5506970 ATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 5506912 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | |||||| |||| || || |||| ||||| || || |||||||| || || Sbjct 5506911 GTCGATCGTGTCGGAGCTC---TCGACTTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTT 5506855 Query 42194 TACAAAGATTTGCAT 42208 || || || ||||| Sbjct 5506854 GACGAATATCTGCAT 5506840 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || |||||||||||||||| || || |||| || || ||||| ||||| || Sbjct 4326376 CTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAA 4326317 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || | ||||||||| | || | | |||||||| | ||| | || | |||| Sbjct 4326316 GATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGT-CTTGAATCTTCGCCTTGACGT 4326258 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || |||| || || || || || ||||| || | Sbjct 4326257 TATCGATCGTGTCTGAGCTC---TCAACCTCGAGGGTTATCGTCTTCCCGGTTAGGGTTT 4326201 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 4326200 TGACAAAGATCTGCAT 4326185 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || || |||||||| || || || |||| ||||||||||| |||||||| Sbjct 4417229 CTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCCGTCCTCTAGCTGCTTCCCAGCGAA 4417170 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| | |||||| || | ||| | | ||||||||| ||| | |||| |||| Sbjct 4417169 GATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCC-TGAATCTTTGCCTTGACAT 4417111 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | || || ||| ||||| || | || || || || || || | |||| Sbjct 4417110 TATCAATTGTATCAGAACTC---TCCACCTCCAGAGTAATAGTCTTCCCAGTCAAAGTCT 4417054 Query 42193 TTACAAAGATTTGCAT 42208 | ||||| |||||||| Sbjct 4417053 TGACAAAAATTTGCAT 4417038 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||||||||| ||||| || |||| || |||||||| |||||||| Sbjct 5507487 CTCCTTCTGAATGTTGTAATCAGCAAGAGTACGGCCGTCCTCAAGCTGCTTCCCAGCGAA 5507428 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCC 42116 ||||| | |||||| || | ||| | | ||||||||| Sbjct 5507427 GATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCC 5507388 Score = 82.4 bits (90), Expect = 8e-11 Identities = 143/207 (69%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 |||||| ||| || ||||| || |||||||| |||| ||||| |||| || || || Sbjct 4416785 ATGCAAGGTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGTTG 4416726 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||| || ||||| || || | ||||||||||| || | | ||||||||| ||| || Sbjct 4416725 CTTTCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGGATCTT 4416666 Query 42125 TTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 42181 || | | | | |||||| |||| || || |||| || || || || || Sbjct 4416665 GGCCTTCACGTTATCGATCGTGTCGGAGCTC---TCGACCTCGAGGGTAATCGTCTTCCC 4416609 Query 42182 CGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || || ||||| ||||| Sbjct 4416608 GGTCAGGGTTTTGACGAAGATCTGCAT 4416582 >seq8 Length=21028080 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| || || || || | | |||| || |||||||| || ||||| Sbjct 17551069 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTCCCGTCCTCGAGCTGCTTTCCGGCGAA 17551010 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | ||| | | |||||||||| ||| || |||| | Sbjct 17551009 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 17550950 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| ||||| || || | || ||||| || |||||||| || || || Sbjct 17550949 GTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCAC 17550890 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 17550889 GAAGATCTGCAT 17550878 >seq2 Length=53008150 Score = 107 bits (118), Expect = 2e-18 Identities = 154/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 ||||||||||||||||||| ||||| ||||| |||||||| || || |||| | | || Sbjct 27083375 CAACACCAAATGCAATGTGGATTCCTTCTGAATGTTGTAATCTGCAAGGGTCCTCCCATC 27083434 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || |||||||| || || || || | | ||||||||| | ||| | || |||||| || Sbjct 27083435 TTCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGAATGCCCTCCTTATC 27083494 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA---TTCCACATCGACCGTGAT 42172 ||| || || | | | | |||||| ||| || || || | ||||| Sbjct 27083495 TTGGATCTTGGCCTTCACATTATCAATCGTGTC---CGAACTCTCTACCTCCAGAGTGAT 27083551 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || || ||||| ||||| |||||||| Sbjct 27083552 TGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 27083587 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| ||| || ||| |||| || |||||||| || ||||| Sbjct 45803897 CTCCTTCTGGATGTTGTAATCCACCAAGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAA 45803956 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | ||| | | ||||||||| ||| || | || | Sbjct 45803957 GATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTAGCCTCGACATT 45804016 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| |||| ||||| |||| |||||||| ||||| || | || || Sbjct 45804017 GTCGATCGTGTCGAAGCTC---TCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTT 45804073 Query 42194 TACAAAGATTTGCAT 42208 |||||||| ||||| Sbjct 45804074 CACAAAGATCTGCAT 45804088 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| |||||| ||||||||||| || || || |||| | || || Sbjct 27083835 ACCAAGTGTAGAGTGGACTCCTTCTGAATATTGTAGTCGGCGAGGGTCCTTCCATCTTCA 27083894 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||||||||| || || || | ||||||||| | ||| | || |||||||| || Sbjct 27083895 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTCT-TG 27083953 Query 42120 ATTTTTTGTTTGAGCGTCGCCACC-GTGTCG---CTCGATTCCACATCGACCGTGATGGT 42175 | | || | || | | | | || || || ||| || || || | || ||||| Sbjct 27083954 AATCTTAGCTTTAACATTGTCAATAGTATCCGAACTC---TCAACTTCTAAGGTAATGGT 27084010 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||| |||||||||||||| Sbjct 27084011 CTTGCCAGTAAGAGTCTTAACAAAGATTTGCAT 27084043 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||||| ||| | |||| || | |||| |||||| ||||| || || || || Sbjct 27084501 CCACCTCTTAGACGGAGGACCAGGTGGAGTGTGGACTCCTTCTGAATGTTATAGTCGGCA 27084560 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || || || || ||||| || || || | |||||||| | ||| Sbjct 27084561 AGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGGG 27084620 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||||||| ||| |||| | ||||| | | | |||||| |||||| Sbjct 27084621 ATCCCTTCCTTGTCC-TGAATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCAC 27084679 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| || || || || || |||||||||||||| ||||| Sbjct 27084680 CTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 27084727 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || || | ||| | ||||| |||| || |||||| || || || ||||| || Sbjct 27088126 CCACCCCTAAGACGAAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGCG 27088185 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || ||| | || || ||||| |||||||| || || || | |||||| || | ||| Sbjct 27088186 AGTGTGCGCCCATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGA 27088245 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | ||||||||| ||| || ||||| | | | || ||| ||| || Sbjct 27088246 ATCCCTTCCTTGTCCTGGATCTTAGCTTTGACATTATCGATGGTATCGGAGCTTTCAACC 27088305 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || |||||||| || || || ||||| |||||||||||||| Sbjct 27088306 TCAAGGGTTATGGTTTTTCCGGTGAGAGTCTTCACAAAGATTTGCAT 27088352 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || || |||||||| || || || | || || ||||| ||||| || || Sbjct 27127799 CTCCTTCTGGATGTTATAATCAGCAAGTGTGCGACCATCCTCGAGCTGTTTACCGGCAAA 27127858 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | ||||||||| | ||| | | ||||||||| ||| | || | || | | Sbjct 27127859 GATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCC-TGAATCTTGGCTTTCACAT 27127917 Query 42137 CGCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || | ||||| |||||| || | || || || ||||| || || ||||||| Sbjct 27127918 TGTCAATGGTGTCGGAGCTTTCCACCTCAAGAGTAATCGTCTTGCCAGTGAGGGTCTTTA 27127977 Query 42196 CAAAGATTTGCAT 42208 ||||||| ||||| Sbjct 27127978 CAAAGATCTGCAT 27127990 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || | ||| | |||||||| | || ||||| || || ||||| || || Sbjct 27087897 ACCACCCCTGAGACGAAGTACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGC 27087956 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || || || || ||||| || ||||| | |||||||| | ||| Sbjct 27087957 AAGTGTGCGTCCATCCTCAAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGG 27088016 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGA---TT 42156 | | ||||| ||| ||| |||| | ||||| | | | ||||| ||| || Sbjct 27088017 GATCCCTTCCTTATCC-TGAATTTTGGCTTTGACATTGTCAATGGTGTC---CGAGCTTT 27088072 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || | || ||||| || || || || |||||||||||||||||||| Sbjct 27088073 CCACCTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTTACAAAGATTTGCAT 27088124 Score = 86.0 bits (94), Expect = 7e-12 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||| ||||| ||||| || || || | || ||||||||||| ||||| || Sbjct 27084081 TCCTTCTGAATGTTGTAGTCAGCAAGGGTACGGCCATCTTCTAGCTGCTTTCCAGCAAAA 27084140 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || |||| ||| || || | ||| | || |||||||||| ||| || |||| | Sbjct 27084141 ATCAGTCTCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 27084200 Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | |||||| ||| ||| || || | || || || || || || || || || Sbjct 27084201 TCGATCGTGTCAGAGCT---TTCAACCTCCAAAGTTATAGTCTTACCAGTCAGGGTTTTC 27084257 Query 42195 ACAAAGATTTGCAT 42208 ||||| || ||||| Sbjct 27084258 ACAAAAATCTGCAT 27084271 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || || | ||| | |||||||| | || ||||| || || ||||| || || Sbjct 27127536 CCACCCCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCA 27127595 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || ||||| || ||||| || || ||||| | |||||||| | ||| Sbjct 27127596 AGTGTGCGTCCATCCTCTAGTTGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 27127655 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||| ||| ||| |||| | ||||| | | | |||||| |||||| Sbjct 27127656 ATCCCTTCCTTATCC-TGAATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCAC 27127714 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| || || || || || || ||||||||||| ||||| Sbjct 27127715 CTCCAGGGTGATAGTCTTTCCAGTGAGGGTTTTTACAAAGATCTGCAT 27127762 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| |||||| || || || || ||||| ||||| || | || || Sbjct 27084747 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGAGTGCGGCCATCCTCG 27084806 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || || || ||||| || ||||| | |||||||| | ||| | | ||||| ||| | Sbjct 27084807 AGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGG 27084866 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || || ||| | | | | ||||| ||| ||| || || | || ||||| Sbjct 27084867 ATCTTGGCTTTTACATTATCAATGGTGTCAGAGCT---TTCGACCTCAAGGGTTATGGTC 27084923 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||| |||||||||||||| Sbjct 27084924 TTGCCGGTGAGAGTCTTCACAAAGATTTGCAT 27084955 >seq7 Length=22269817 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| || || || || | |||| || |||||||| || ||||| Sbjct 17754906 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 17754965 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | ||| | | |||||||||| ||| || |||| | Sbjct 17754966 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 17755025 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| ||||| || || | || ||||| || |||||||| || || || Sbjct 17755026 GTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCAC 17755085 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 17755086 GAAGATCTGCAT 17755097 >seq3 Length=30666748 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||| | |||| || ||| |||| || |||||||| || ||||| Sbjct 27013327 CTCCTTCTGGATGTTGTAAACCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAA 27013386 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | ||| | | ||||||||| ||| || |||| | Sbjct 27013387 GATCAGCCGCTGCTGGTCTGGTGGAATCCCTTCCTTGTCCTGGATCTTAGCCTTGACATT 27013446 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | |||| |||| ||||| |||| |||||||| ||||| | | || || Sbjct 27013447 GTCGATCATGTCGGAGCTC---TCCACCTCGAGAGTGATGGTCTTGCCGATCAAAGTTTT 27013503 Query 42194 TACAAAGATTTGCAT 42208 |||||||| ||||| Sbjct 27013504 CACAAAGATCTGCAT 27013518 >seq1 Length=32082701 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| |||| || |||||||| || |||||||| || ||||| Sbjct 7111297 CTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCTCGTCCTCAAGCTGCTTTCCGGCGAA 7111238 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCA-CGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG 42135 || || ||||||||||| | ||| | | || || |||||| ||| || |||| Sbjct 7111237 GATCAGCCGCTGCTGGTCCGGTGGAATCTCT-TCGTTGTCCTGGATCTTAGCCTTGACAT 7111179 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | |||| | |||| ||||| | || |||||||| ||||| || | || | Sbjct 7111178 TGTTGATCGTGGCGAAGCTC---TCCACCTTGAGAGTGATGGTCTTGCCGGTCAAAGTTT 7111122 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 7111121 TCACAAAGATCTGCAT 7111106 >seq4 Length=29346085 Score = 91.5 bits (100), Expect = 2e-13 Identities = 167/238 (70%), Gaps = 10/238 (4%) Strand=Plus/Minus Query 41977 ATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAAT 42036 |||| || || |||| ||| | || || || | ||| |||||||||||| ||||||| Sbjct 23772495 ATCG-CCACCACTTAGACGGAGGACAAAGTGGAGAGTGGACTCCTTTTGAATGTTGTAAT 23772437 Query 42037 CAGCCAGAGTCCGCTCGTCATC-TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 42095 | || |||||| |||| || | ||||| | ||||| ||||| | ||||||| | Sbjct 23772436 CGGCGCGAGTCCAGCCGTCCTCAAAATTGCTTGCGGGCGAAGATGAGCCTCTGCTGGCCC 23772377 Query 42096 GCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCT 42151 | || | | |||||||||| ||| | || || | ||| | | | |||||| ||| Sbjct 23772376 GGCGGAATCCCCTCCTTGTCC-TGAATCTTCGTCTTCACGTTGTCGATCGTGTCGGAGCT 23772318 Query 42152 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 | ||||| || ||||||||||| || || |||||| || ||||| |||||| Sbjct 23772317 C---TCCACCTCCTGAGTGATGGTTTTCCCGGTCGACGTCTTGACGAAGATCTGCATT 23772263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543202587599360