Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20maxima_20[genbank_20GCA_5F002006925.1_202017-03-07] 1,504 sequences; 345,757,338 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq7 138 2e-27 >seq7 Length=22269817 Score = 138 bits (152), Expect = 2e-27 Identities = 380/571 (67%), Gaps = 15/571 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| ||||||||||| || || || |||||||| || || ||||||| Sbjct 8165705 ATTTGGGAAATGTACAAGAAAGCCGAAGCGTCGTTTTGGACCGCTGAGGAAGTTGATCTT 8165646 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | | || | | |||| | || ||| || |||||| |||| || ||| | || Sbjct 8165645 TCGCAAGATCTCCGCCACTGGGAGGCCCTAACCGCTGACGAGAAGCACTTCGTCACGCAC 8165586 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 ||| | || ||||| |||||||| || || || || |||||| || || || ||| Sbjct 8165585 GTGCTCGCCTTCTTCGCAGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCGGAAGGTTC 8165526 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT-TTCTACGGTTTCCAGATGGCCATCGA 25715 | | ||| || ||| || ||||| ||| |||||||| ||||| || |||||||| Sbjct 8165525 ATGACGGAGGTCCAGGTCGCCGAGGCGC-GTGCCTTCTACGGCTTCCAAATCGCCATCGA 8165467 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGA 25775 || | ||||| || |||| | |||||| || ||||| | |||| || ||| Sbjct 8165466 GAACATCCACTCCGAAATGTACTCGCTGCTTCTAGAAACTTACATCAAAGACTCCGACGA 8165407 Query 25776 GAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTG 25835 | | || || ||| ||||||||| | ||| || || | ||| || ||| Sbjct 8165406 AAAGAACCGTCTCTTTCACGCCATCGAGACGGTTCCCTGCGTCGCAAAGAAAGCCACGTG 8165347 Query 25836 GGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894 ||| | || |||||| || || | ||| || || | ||| | | | || |||| Sbjct 8165346 GGCGTTAAATTGGATCGACGGCTCGGAG----ACTTTCGCGGAGAGATTAATCGCGTTTG 8165291 Query 25895 CTGCTGTGGAGGGCATCTTTTTC--AGCG-GTTCGTTTGCGGCCATCTTCTGGCTCAAGC 25951 || |||||||| || || ||| || | ||| |||||| | || || |||||||| Sbjct 8165290 CTTGCGTGGAGGGGATTTTCTTCTCAGGGAGTT--TTTGCG-CGATATTTTGGCTCAAAA 8165234 Query 25952 AGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || ||| ||||| ||| | || || || |||||| | ||| | || |||||| Sbjct 8165233 AGCGCGGGTTAATGCC-GGGATTAACATTCTCAAACGAGTTGATCTCTCGAGATGAGGGT 8165175 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 |||||| | ||||| || |||||| | |||| Sbjct 8165174 CTCCACTGCGATTTCGCGTGCCTGTTGTACA 8165144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928827337717760