Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20maxima_20[genbank_20GCA_5F002006925.1_202017-03-07] 1,504 sequences; 345,757,338 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 6e-11 >seq2 Length=53008150 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAA--ACAGAACCCG 106317 |||||||| |||||||| || | |||||||||||||||||| | ||| ||| || Sbjct 27084043 ATGCAAATCTTTGTTAAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCG 27083984 Query 106318 GCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATC 106377 ||| || ||| | | || ||| || ||| ||||| |||||| | || ||| | Sbjct 27083983 --GATACTATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCCACCTGACC 27083926 Query 106378 AACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACA 106437 | || |||||||| | ||| || || || | |||||| | || | | ||| |||| Sbjct 27083925 AGCAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGAAGGACCCTCGCCGACTACA 27083866 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGT 106468 | || || || || || || ||||| || || Sbjct 27083865 ATATTCAGAAGGAGTCCACTCTACACTTGGT 27083835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402322225298432