Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20medica_20[genbank_20GCA_5F002013955.1_202017-03-03]
32,731 sequences; 404,954,971 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq17788 122 1e-22
seq31290 109 6e-19
seq30011 107 2e-18
seq5684 104 3e-17
seq5117 102 9e-17
seq30177 98.7 1e-15
seq26060 95.1 1e-14
seq26449 86.0 7e-12
seq15010 86.0 7e-12
seq5228 86.0 7e-12
seq32067 82.4 9e-11
seq10231 82.4 9e-11
>seq17788
Length=1137600
Score = 122 bits (134), Expect = 1e-22
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
||||| |||| || |||||| || || ||||| || |||| || ||| |||| ||
Sbjct 830999 CACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGCCCGTCTTC 831058
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
|||||||| || ||||| ||||| ||||||||||| | || | || ||||||||||
Sbjct 831059 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 831118
Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152
||| || |||| ||| | | | |||||| || ||||| || | ||| ||||| |
Sbjct 831119 GATCTTCGCCTTGA-CGTTGTCGATTGTGTCGGAGGACTCCACCTCCAACGTTATGGTCT 831177
Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
| |||||||| || || || ||||| ||||| ||
Sbjct 831178 TACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 831211
>seq31290
Length=752448
Score = 109 bits (120), Expect = 6e-19
Identities = 144/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || |||||||| |||| || ||| |||| || |||||||| || |||||
Sbjct 673795 CTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAA 673736
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | | ||||||||| ||| || |||| |||
Sbjct 673735 GATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 673677
Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | |||||| |||| ||||| |||| |||||||| ||||| || | || |
Sbjct 673676 TGTCGATCGTGTCGGAGCTC---TCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTT 673620
Query 43168 TTACAAAGATTTGCAT 43183
| |||||||| |||||
Sbjct 673619 TCACAAAGATCTGCAT 673604
Score = 102 bits (112), Expect = 9e-17
Identities = 143/197 (73%), Gaps = 8/197 (4%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||||||||| |||||||| || ||||| || | || || |||||||| || |||||
Sbjct 674251 CTCCTTTTGAATGTTGTAATCGGCGAGAGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAA 674192
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| | ||||||||| | || | | ||| |||||| ||| || || | |||
Sbjct 674191 GATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTTGTCCTGGATCTTGGCCTTCA-CGT 674133
Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | |||||| |||| ||||| || | ||||| || || || || | |||||
Sbjct 674132 TGTCGATCGTGTCGGAGCTC---TCCACCTCCAGGGTGATCGTCTTCCCGGTCAACGTCT 674076
Query 43168 TTACAAAGATTTGCATT 43184
| || ||||| ||||||
Sbjct 674075 TGACGAAGATCTGCATT 674059
>seq30011
Length=125740
Score = 107 bits (118), Expect = 2e-18
Identities = 143/195 (73%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || |||||||||||||||| || || |||| || || ||||| || |||||
Sbjct 33428 TCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCTGCGAAG 33369
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| |||| ||||||||| | ||| | | ||||||||| ||| || |||| |||
Sbjct 33368 ATCAGTCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 33310
Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | | |||||| |||| || || |||| || ||||| ||||| ||||| || ||
Sbjct 33309 GTCGATCGTGTCGGAGCTC---TCAACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTT 33253
Query 43169 TACAAAGATTTGCAT 43183
|| ||||| |||||
Sbjct 33252 CACGAAGATCTGCAT 33238
Score = 104 bits (114), Expect = 3e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || | ||||||||||| ||| | || ||||| ||||| |||||||| ||
Sbjct 33920 CCACCCCTCAGACGCAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCG 33861
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| |||| | || || |||||||| |||||||| || | ||||||||||| | |||
Sbjct 33860 AGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGA 33801
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132
| | ||||||||| ||| || |||| ||| | | | |||||| |||| ||
Sbjct 33800 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCGGAGCTC---TC 33745
Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| |||| || || || || |||||||| || || || || || |||||
Sbjct 33744 GACCTCGAGGGTAATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 33694
Score = 102 bits (112), Expect = 9e-17
Identities = 142/195 (73%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || ||||||||||| |||||||| || |||| || || ||||| || || ||
Sbjct 33656 TCCTTCTGGATATTGTAATCGGCCAGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCAAAG 33597
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| |||| ||||||||| | ||| | | ||||||||| ||| || |||| |||
Sbjct 33596 ATCAGTCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 33538
Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | | |||||| |||| || || |||| ||||| || || |||||||| || ||
Sbjct 33537 GTCGATCGTGTCGGAGCTC---TCGACTTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTT 33481
Query 43169 TACAAAGATTTGCAT 43183
|| || || |||||
Sbjct 33480 GACGAATATCTGCAT 33466
Score = 96.9 bits (106), Expect = 4e-15
Identities = 143/199 (72%), Gaps = 8/199 (4%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|||||||| ||||||||||| |||| || || |||| || ||||| || || |||||
Sbjct 33200 TCCTTTTGGATATTGTAATCGGCCAAGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAG 33141
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || ||||||||||| | || | | |||||||| ||| || |||| |||
Sbjct 33140 ATCAGACGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 33082
Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | | ||||| |||| || || |||| || ||||| ||||| ||||| || ||
Sbjct 33081 GTCGATGGTGTCGGAGCTC---TCGACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTT 33025
Query 43169 TACAAAGATTTGCATTTTT 43187
|| ||||| ||||| |||
Sbjct 33024 CACGAAGATCTGCATCTTT 33006
Score = 82.4 bits (90), Expect = 9e-11
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| ||||||||||| ||||| || |||| || ||||| || ||||||||
Sbjct 34113 CTCCTTCTGAATGTTGTAATCAGCAAGAGTACGGCCGTCCTCAAGCTGTTTCCCAGCGAA 34054
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091
||||| | |||||| || | || | | |||||||||
Sbjct 34053 GATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCC 34014
>seq5684
Length=29006
Score = 104 bits (114), Expect = 3e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || | ||||||||||| ||| | || ||||| ||||| |||||||| ||
Sbjct 6247 CCACCCCTCAGACGCAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCG 6188
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| |||| | || || |||||||| |||||||| || | ||||||||||| | |||
Sbjct 6187 AGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGA 6128
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132
| | ||||||||| ||| || |||| ||| | | | |||||| |||| ||
Sbjct 6127 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCGGAGCTC---TC 6072
Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| |||| || || || || |||||||| || || || || || |||||
Sbjct 6071 GACCTCGAGGGTAATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 6021
Score = 102 bits (112), Expect = 9e-17
Identities = 142/195 (73%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || |||||||||||||||| || || |||| || || ||||| || |||||
Sbjct 5299 TCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCTGCGAAG 5240
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || | ||||||||| | ||| | | ||||||||| ||| || |||| |||
Sbjct 5239 ATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 5181
Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | | |||||| |||| || || |||| || ||||| ||||| ||||| || ||
Sbjct 5180 GTCGATCGTGTCGGAGCTC---TCAACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTT 5124
Query 43169 TACAAAGATTTGCAT 43183
|| ||||| |||||
Sbjct 5123 CACGAAGATCTGCAT 5109
Score = 98.7 bits (108), Expect = 1e-15
Identities = 141/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || ||||||||||| |||||||| || |||| || || ||||| || || ||
Sbjct 5527 TCCTTCTGGATATTGTAATCGGCCAGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCAAAG 5468
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || | ||||||||| | ||| | | ||||||||| ||| || |||| |||
Sbjct 5467 ATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 5409
Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | | |||||| |||| || || |||| ||||| || || |||||||| || ||
Sbjct 5408 GTCGATCGTGTCGGAGCTC---TCGACTTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTT 5352
Query 43169 TACAAAGATTTGCAT 43183
|| || || |||||
Sbjct 5351 GACGAATATCTGCAT 5337
Score = 98.7 bits (108), Expect = 1e-15
Identities = 141/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || ||||||||||| |||||||| || |||| || || ||||| || || ||
Sbjct 5755 TCCTTCTGGATATTGTAATCGGCCAGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCAAAG 5696
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || | ||||||||| | ||| | | ||||||||| ||| || |||| |||
Sbjct 5695 ATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 5637
Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | | |||||| |||| || || |||| ||||| || || |||||||| || ||
Sbjct 5636 GTCGATCGTGTCGGAGCTC---TCGACTTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTT 5580
Query 43169 TACAAAGATTTGCAT 43183
|| || || |||||
Sbjct 5579 GACGAATATCTGCAT 5565
Score = 98.7 bits (108), Expect = 1e-15
Identities = 141/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || ||||||||||| |||||||| || |||| || || ||||| || || ||
Sbjct 5983 TCCTTCTGGATATTGTAATCGGCCAGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCAAAG 5924
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || | ||||||||| | ||| | | ||||||||| ||| || |||| |||
Sbjct 5923 ATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 5865
Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | | |||||| |||| || || |||| ||||| || || |||||||| || ||
Sbjct 5864 GTCGATCGTGTCGGAGCTC---TCGACTTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTT 5808
Query 43169 TACAAAGATTTGCAT 43183
|| || || |||||
Sbjct 5807 GACGAATATCTGCAT 5793
Score = 96.9 bits (106), Expect = 4e-15
Identities = 143/199 (72%), Gaps = 8/199 (4%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|||||||| ||||||||||| |||| || || |||| || ||||| || || |||||
Sbjct 5071 TCCTTTTGGATATTGTAATCGGCCAAGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAG 5012
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || ||||||||||| | || | | |||||||| ||| || |||| |||
Sbjct 5011 ATCAGACGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 4953
Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | | ||||| |||| || || |||| || ||||| ||||| ||||| || ||
Sbjct 4952 GTCGATGGTGTCGGAGCTC---TCGACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTT 4896
Query 43169 TACAAAGATTTGCATTTTT 43187
|| ||||| ||||| |||
Sbjct 4895 CACGAAGATCTGCATCTTT 4877
Score = 82.4 bits (90), Expect = 9e-11
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| ||||||||||| ||||| || |||| || ||||| || ||||||||
Sbjct 6440 CTCCTTCTGAATGTTGTAATCAGCAAGAGTACGGCCGTCCTCAAGCTGTTTCCCAGCGAA 6381
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091
||||| | |||||| || | || | | |||||||||
Sbjct 6380 GATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCC 6341
>seq5117
Length=577398
Score = 102 bits (112), Expect = 9e-17
Identities = 153/216 (71%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|||||||||||||| |||| ||||| ||||| |||||||| || || |||| | | ||
Sbjct 107738 CAACACCAAATGCAGTGTGGATTCCTTCTGAATGTTGTAATCTGCAAGGGTCCTCCCATC 107797
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| |||||||| || || || || | || ||||||||| | || | || |||||| ||
Sbjct 107798 TTCAAGCTGCTTGCCTGCAAAAATCAATCTCTGCTGGTCTGGTGGAATGCCCTCCTTATC 107857
Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA---TTCCACATCGACCGTGAT 43147
||| || || | | | | |||||| ||| || || || | |||||
Sbjct 107858 TTGGATCTTGGCCTTCACATTATCAATCGTGTC---CGAACTCTCTACCTCCAGAGTGAT 107914
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| || || || ||||| ||||| ||||||||
Sbjct 107915 TGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 107950
Score = 98.7 bits (108), Expect = 1e-15
Identities = 152/213 (71%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
||||| || | ||| |||||| ||||||||||| || || || |||| | || ||
Sbjct 108198 ACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAGTCGGCAAGGGTCCTTCCATCTTCA 108257
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|||||||||||||| || || || | ||||||||| | ||| | || |||||||| ||
Sbjct 108258 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCT-TG 108316
Query 43095 ATTTTTTGTTTGAGCGTCGCCACC-GTGTCG---CTCGATTCCACATCGACCGTGATGGT 43150
| | || | || | | | | || || || ||| || || || | || |||||
Sbjct 108317 AATCTTAGCTTTAACATTGTCAATAGTATCCGAACTC---TCAACTTCTAAGGTAATGGT 108373
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| || || ||||| ||||||||||||||
Sbjct 108374 CTTGCCAGTAAGAGTCTTAACAAAGATTTGCAT 108406
Score = 91.5 bits (100), Expect = 2e-13
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || | ||| | ||||| || | ||| |||||| || || || || |||||
Sbjct 108864 CCACCCCTGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCA 108923
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || || ||||| |||||||| || ||||||| |||||||| | ||
Sbjct 108924 AGAGTGCGACCATCCTCAAGCTGTTTACCAGCAAAGATGAGTCTTTGCTGGTCTGGTGGG 108983
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133
| | ||||| ||| ||| || ||| | | | | ||||| ||| |||
Sbjct 108984 ATCCCTTCCTTATCCTGGATCTTGGCTTTTACGTTATCAATGGTGTCAGAGCT---TTCG 109040
Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || | || ||||| ||||| || || ||||| ||||||||||||||
Sbjct 109041 ACCTCAAGGGTTATGGTCTTGCCGGTGAGAGTCTTCACAAAGATTTGCAT 109090
Score = 89.7 bits (98), Expect = 6e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || | ||| | ||||| |||| || |||||| || || || ||||| ||
Sbjct 112248 CCACCCCTAAGACGAAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGCG 112307
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || ||| | || || ||||| |||||||| || || || | |||||| || | ||
Sbjct 112308 AGTGTGCGCCCATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGA 112367
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| | ||||||||| ||| || ||||| | | | || ||| ||| ||
Sbjct 112368 ATCCCTTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATGGTATCGGAGCTTTCAACC 112427
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | || |||||||| || || || ||||| ||||||||||||||
Sbjct 112428 TCAAGGGTTATGGTTTTTCCGGTGAGAGTCTTCACAAAGATTTGCAT 112474
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| ||||| ||||| ||||| || || || | || ||||||||||| ||||| ||
Sbjct 108444 TCCTTCTGAATGTTGTAGTCAGCAAGGGTACGGCCATCTTCTAGCTGCTTTCCAGCAAAG 108503
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111
|| |||| |||||| || | || | || |||||||||| ||| | || | |||| |
Sbjct 108504 ATCAGTCTCTGCTGATCAGGAGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTTGACATT 108562
Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | ||||| ||| ||| || || | || || ||||| || || || || ||
Sbjct 108563 GTCGATTGTGTCAGAGCT---TTCAACCTCCAAAGTTATAGTTTTACCAGTCAGGGTTTT 108619
Query 43169 TACAAAGATTTGCAT 43183
||||| || |||||
Sbjct 108620 CACAAAAATCTGCAT 108634
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || | ||| | |||||||| | || ||||| || || ||||| || ||
Sbjct 148408 CCACCCCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCA 148467
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || ||||| || ||||| || || ||||| | |||||||| | ||
Sbjct 148468 AGTGTGCGTCCATCCTCTAGTTGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 148527
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||||| ||| ||| |||| | ||||| | | | |||||| ||||||
Sbjct 148528 ATCCCTTCCTTATCC-TGAATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCAC 148586
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | ||||| || || || || || |||||||||||||| |||||
Sbjct 148587 CTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 148634
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || || |||||||| || || || | || || ||||| ||||| || ||
Sbjct 148671 CTCCTTCTGGATGTTATAATCAGCAAGTGTGCGACCATCCTCGAGCTGTTTACCGGCAAA 148730
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || | ||||||||| | || | | ||||||||| ||| | || | || | |
Sbjct 148731 GATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCC-TGAATCTTGGCTTTCACAT 148789
Query 43112 CGCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| || | ||||| |||||| || | || || || ||||| || || |||||||
Sbjct 148790 TGTCAATGGTGTCGGAGCTTTCCACCTCAAGAGTAATTGTCTTGCCAGTGAGGGTCTTTA 148849
Query 43171 CAAAGATTTGCAT 43183
||||||| |||||
Sbjct 148850 CAAAGATCTGCAT 148862
Score = 82.4 bits (90), Expect = 9e-11
Identities = 159/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || | ||| | |||||||| | || ||||| || || ||||| || ||
Sbjct 112020 CCACCCCTGAGACGAAGTACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCA 112079
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || || || || ||||| || ||||| | |||||||| | ||
Sbjct 112080 AGTGTGCGTCCATCCTCAAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 112139
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGA---TTC 43132
| | ||||| ||| ||| |||| | ||||| | | | ||||| ||| |||
Sbjct 112140 ATCCCTTCCTTATCC-TGAATTTTGGCTTTGACATTGTCAATGGTGTC---CGAGCTTTC 112195
Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| || | || ||||| || || || || ||||||||||||||||||||
Sbjct 112196 CACCTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTTACAAAGATTTGCAT 112246
>seq30177
Length=790404
Score = 98.7 bits (108), Expect = 1e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||| || ||||| || || || || | |||| || |||||||| || |||||
Sbjct 117861 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 117802
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||| | || | | |||||||||| ||| || |||| |
Sbjct 117801 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 117742
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | ||||| ||||| || || | || ||||| || |||||||| || || ||
Sbjct 117741 GTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCAC 117682
Query 43172 AAAGATTTGCAT 43183
||||| |||||
Sbjct 117681 GAAGATCTGCAT 117670
>seq26060
Length=987722
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||| || ||||| || || || || | |||| || |||||||| || ||||
Sbjct 875340 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGACGAA 875399
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||| | || | | |||||||||| ||| || |||| |
Sbjct 875400 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 875459
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | ||||| ||||| || || | || ||||| || |||||||| || || ||
Sbjct 875460 GTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCAC 875519
Query 43172 AAAGATTTGCAT 43183
||||| |||||
Sbjct 875520 GAAGATCTGCAT 875531
>seq26449
Length=270109
Score = 86.0 bits (94), Expect = 7e-12
Identities = 139/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || |||||||| |||| || ||| ||| || |||| ||| | |||||
Sbjct 202082 CTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCTGTCCTCGAGCTACTTTTCGGCGAA 202023
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCA-CGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG 43110
|| || ||||||||||| | || | | || ||||||||| ||| || ||||
Sbjct 202022 AATAAGCCGCTGCTGGTCCGGTGGAATCTCT-TCCTTGTCCTGGATCTTAGCCTTGACAT 201964
Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | | |||| |||| ||||| |||| |||||||| ||||| || | || |
Sbjct 201963 TGTCGATCATGTCGGAGCTC---TCCACCTCGAGAGTGATGGTCTTGCCGGTAAAAGTTT 201907
Query 43168 TTACAAAGATTTGCAT 43183
| |||||||| |||||
Sbjct 201906 TCACAAAGATCTGCAT 201891
>seq15010
Length=449990
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
|||||| ||| || || ||| ||||||||| |||| |||||||||||||||| ||||
Sbjct 254330 AAAAATATTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 254389
Query 60117 TCACCACTATACTAC 60131
|||||||||||||||
Sbjct 254390 TCACCACTATACTAC 254404
>seq5228
Length=576636
Score = 86.0 bits (94), Expect = 7e-12
Identities = 141/197 (72%), Gaps = 10/197 (5%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || |||||||| |||| || || |||| || |||||||| ||||| ||
Sbjct 487338 CTCCTTCTGTATGTTGTAATCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAA 487279
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110
|| || | |||||| || | || | | ||||||||| ||| | || | |||| ||
Sbjct 487278 GATAAGCCTCTGCTGATCCGGGGGGATTCCCTCCTTGTCT-TGAATCTTCGCCTTGA-CG 487221
Query 43111 TCGCC-ACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 43166
| | | | |||||| ||| || || |||| || || |||||||| || || ||
Sbjct 487220 TTGTCGATGGTGTCGGAGCTC---TCGACTTCGAGAGTAATAGTTTTGCCAGTCAGGGTT 487164
Query 43167 TTTACAAAGATTTGCAT 43183
|| || |||||||||||
Sbjct 487163 TTCACGAAGATTTGCAT 487147
Score = 86.0 bits (94), Expect = 7e-12
Identities = 139/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || |||||||||||||||| || || |||| || || ||||| ||||| ||
Sbjct 487566 CTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAA 487507
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| || | ||||||||| | || | | |||||||| | ||| | || | ||||
Sbjct 487506 GATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGT-CTTGAATCTTCGCCTTGACGT 487448
Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | |||||| ||| || || |||| || || || || || ||||| || |
Sbjct 487447 TATCGATCGTGTCTGAACTC---TCAACCTCGAGGGTTATCGTCTTCCCGGTTAGGGTTT 487391
Query 43168 TTACAAAGATTTGCAT 43183
| |||||||| |||||
Sbjct 487390 TGACAAAGATCTGCAT 487375
>seq32067
Length=720804
Score = 82.4 bits (90), Expect = 9e-11
Identities = 161/233 (69%), Gaps = 9/233 (4%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || |||| ||| | || || || | ||| |||||||||||| |||||||| ||
Sbjct 300108 CCACCACTTAGACGGAGGACAAAGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCG 300167
Query 43017 AGAGTCCGCTCGTCATC-TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|||||| ||| || | ||| | | ||||| ||||| | ||||||| | | |||
Sbjct 300168 CGAGTCCAGCCGTTCTCAAAATTGCCTGCGGGCGAAGATGAGCCTCTGCTGGCCCGGCGG 300227
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131
| | || ||||||| ||| | || || | ||| | | | || ||| |||| |
Sbjct 300228 AATCCCCTTCTTGTCC-TGAATCTTCGTCTTCACGTTGTCGATCGCGTCGGAGCTC---T 300283
Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|||| || | ||||||||||| || || |||||| || ||||| ||||||
Sbjct 300284 CCACCTCCAGAGTGATGGTTTTCCCGGTCGACGTCTTGACGAAGATCTGCATT 300336
>seq10231
Length=516754
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
|||||| | | || || ||| ||||||||| |||| |||||||||||||||| ||||
Sbjct 245880 AAAAATCTACGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 245939
Query 60117 TCACCACTATACTAC 60131
|||||||||||||||
Sbjct 245940 TCACCACTATACTAC 245954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571583647976680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |