Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20medica_20[genbank_20GCA_5F002013955.1_202017-03-03]
32,731 sequences; 404,954,971 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq28498 109 5e-19
seq27564 82.4 7e-11
>seq28498
Length=175162
Score = 109 bits (120), Expect = 5e-19
Identities = 123/164 (75%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 38390 AACTAGACATT--TGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTAT 38447
||||| |||| || ||| ||||||||| || ||||| | ||||||||||||||| |
Sbjct 163425 AACTAAACATGCCTGGGGCCTTGGAGTTCCAGCATTAAAAAGTGTAGGAGATGCATGGGT 163484
Query 38448 GAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTG 38507
||||||| ||| |||| || ||||||| || || ||| |||||| | |||
Sbjct 163485 GAACCATCTTTGGGACATCATATGGTATGTTTTAATAGCAGAATCAATATCATCCTTGTG 163544
Query 38508 AATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTA 38551
||| || | ||| |||||||| | |||||| || ||||||||||
Sbjct 163545 AATTCCAATAGAAACCCTCATCAACATATGCTGAGGTCTTTCTA 163588
>seq27564
Length=213285
Score = 82.4 bits (90), Expect = 7e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468
||| ||||| || ||||| | ||| ||||||||||| | |||||| || ||||
Sbjct 94303 TGGTGTTCCAGCATTAAAAAGTGTGGGAGATGCATGGGTAAACCATCGTTGAGACATCAT 94362
Query 38469 ATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCAT 38528
|| ||||||| || || ||| || ||| | |||||| || | || ||||||||
Sbjct 94363 ATGGTATGTTTTGATAGCAGAATCAATGTCATCCTTGTGAATCCCAACAGCAACCCTCAT 94422
Query 38529 TAGCATATGTTGTGGTCTTTCTA 38551
| ||||||||| ||||||||||
Sbjct 94423 CAACATATGTTGGGGTCTTTCTA 94445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468333108934640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |