Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20medica_20[genbank_20GCA_5F002013955.1_202017-03-03] 32,731 sequences; 404,954,971 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq25119 86.0 7e-12 seq31046 82.4 8e-11 seq6699 82.4 8e-11 seq4340 82.4 8e-11 >seq25119 Length=352517 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||| | |||||||||| ||||||||||||| |||| | |||||||||| Sbjct 30799 GCGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAAT 30740 Query 92675 CCCA-CTCC 92682 |||| |||| Sbjct 30739 CCCATCTCC 30731 >seq31046 Length=92031 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||| | |||||||||| ||||||||||||| |||| | |||||||||| Sbjct 31597 GCGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAAT 31656 Query 92675 CCC 92677 ||| Sbjct 31657 CCC 31659 >seq6699 Length=24755 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||| | |||||||||| ||||||||||||| |||| | |||||||||| Sbjct 24634 GCGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAAT 24693 Query 92675 CCC 92677 ||| Sbjct 24694 CCC 24696 >seq4340 Length=32744 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||| | |||||||||| ||||||||||||| |||| | |||||||||| Sbjct 24967 GCGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAAT 25026 Query 92675 CCC 92677 ||| Sbjct 25027 CCC 25029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526382948847120