Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20medica_20[genbank_20GCA_5F002013955.1_202017-03-03] 32,731 sequences; 404,954,971 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq17788 158 1e-33 seq31290 127 2e-24 seq30177 122 1e-22 seq26060 116 4e-21 seq30011 113 5e-20 seq5684 113 5e-20 seq18898 105 8e-18 seq5228 100 3e-16 seq26449 95.1 1e-14 seq5117 93.3 5e-14 seq27442 84.2 2e-11 >seq17788 Length=1137600 Score = 158 bits (174), Expect = 1e-33 Identities = 165/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||||| | || ||| |||| || Sbjct 830999 CACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGCCCGTCTTC 831058 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || | |||||||||||| | || | || |||||||||| Sbjct 831059 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 831118 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||||| ||| | | | |||||| || ||||| |||| ||| ||||| | Sbjct 831119 GATCTTCGCCTTGA-CGTTGTCGATTGTGTCGGAGGACTCCACCTCCAACGTTATGGTCT 831177 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 | ||||| || ||||| || ||||| ||||| || Sbjct 831178 TACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 831211 >seq31290 Length=752448 Score = 127 bits (140), Expect = 2e-24 Identities = 148/196 (76%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || | | |||||| |||| ||||||||||| |||||||| Sbjct 673795 CTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAA 673736 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | | ||||||||| |||||| ||||| ||| Sbjct 673735 GATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 673677 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | |||||| |||| ||||| || | |||||||| ||||| |||| |||| Sbjct 673676 TGTCGATCGTGTCGGAGCTC---TCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTT 673620 Query 46578 TAACAAAGATTTGCAT 46593 | |||||||| ||||| Sbjct 673619 TCACAAAGATCTGCAT 673604 Score = 118 bits (130), Expect = 1e-21 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | |||||||| || || | || ||||| ||||| || || |||| Sbjct 674058 CCTCCCCTCAGGCGCAACACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGCC 673999 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| |||| || ||||||||||||||||| |||| | ||||||||| | || Sbjct 673998 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGG 673939 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | ||| |||||| ||||||| ||| | ||| | | | |||||| |||| || Sbjct 673938 ATCCCCTCTTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATCGTGTCGGAGCTC---TC 673883 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||| ||||| || || || ||||| || || || ||||| ||||| Sbjct 673882 CACCTCCAGGGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAGATCTGCAT 673832 Score = 111 bits (122), Expect = 2e-19 Identities = 145/197 (74%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || ||||| |||| ||||| || | || |||||||||||||||||||| Sbjct 674251 CTCCTTTTGAATGTTGTAATCGGCGAGAGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAA 674192 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | | ||| |||||| |||||| ||| | ||| Sbjct 674191 GATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTTGTCCTGGATCTTGGCCTTCA-CGT 674133 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | |||||| |||| ||||| |||| ||||| || || || |||| ||| | Sbjct 674132 TGTCGATCGTGTCGGAGCTC---TCCACCTCCAGGGTGATCGTCTTCCCGGTCAACGTCT 674076 Query 46578 TAACAAAGATTTGCATT 46594 | || ||||| |||||| Sbjct 674075 TGACGAAGATCTGCATT 674059 >seq30177 Length=790404 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||||| ||| || | |||| ||||||||||| |||||||| Sbjct 117861 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 117802 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 117801 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 117742 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||||| || || | || ||||| || ||||| || ||||| || Sbjct 117741 GTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCAC 117682 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 117681 GAAGATCTGCAT 117670 >seq26060 Length=987722 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||||| ||| || | |||| ||||||||||| ||| |||| Sbjct 875340 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGACGAA 875399 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 875400 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 875459 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||||| || || | || ||||| || ||||| || ||||| || Sbjct 875460 GTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCAC 875519 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 875520 GAAGATCTGCAT 875531 >seq30011 Length=125740 Score = 113 bits (124), Expect = 5e-20 Identities = 169/236 (72%), Gaps = 8/236 (3%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | ||| ||||| | || ||||||||||||||||| |||| Sbjct 33238 TGCCTCCACGGAGACGAAGCACAAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCGG 33179 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| |||| |||||||| || |||||||| |||| ||||||||||| | | Sbjct 33178 CCAAGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAG 33119 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | |||||||| |||||| ||||| ||| | | | ||||| |||| Sbjct 33118 GGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC--- 33063 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || || || | || ||||| ||||| || || ||||| || ||||| ||||| || Sbjct 33062 TCGACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTT 33007 Score = 111 bits (122), Expect = 2e-19 Identities = 144/195 (74%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||| |||| |||||||| |||| ||||| ||||| ||||| || Sbjct 33656 TCCTTCTGGATATTGTAATCGGCCAGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCAAAG 33597 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | ||||||||| | ||| | | ||||||||| |||||| ||||| ||| Sbjct 33596 ATCAGTCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 33538 Query 46523 G-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | |||||| |||| || || || | ||||| || || ||||| || ||||| Sbjct 33537 GTCGATCGTGTCGGAGCTC---TCGACTTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTT 33481 Query 46579 AACAAAGATTTGCAT 46593 || || || ||||| Sbjct 33480 GACGAATATCTGCAT 33466 Score = 107 bits (118), Expect = 2e-18 Identities = 166/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | ||||||||||||||| | || ||||| || || ||||| || | Sbjct 33922 TGCCACCCCTCAGACGCAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCG 33863 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || | | || || ||||||||||| ||||| ||||| ||||||||||| | || Sbjct 33862 CGAGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCG 33803 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | ||||||||| |||||| ||||| ||| | | | |||||| |||| Sbjct 33802 GAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCGGAGCTC--- 33747 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || || || || ||||| || ||||| || || || ||||| Sbjct 33746 TCGACCTCGAGGGTAATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 33694 Score = 102 bits (112), Expect = 9e-17 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||| || | | ||||| |||| ||||| ||||| || ||||| Sbjct 33428 TCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCTGCGAAG 33369 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | ||||||||| | ||| | | ||||||||| |||||| ||||| ||| Sbjct 33368 ATCAGTCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 33310 Query 46523 G-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | |||||| |||| || || || | || ||||| ||||| || || ||||| Sbjct 33309 GTCGATCGTGTCGGAGCTC---TCAACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTT 33253 Query 46579 AACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 33252 CACGAAGATCTGCAT 33238 >seq5684 Length=29006 Score = 113 bits (124), Expect = 5e-20 Identities = 169/236 (72%), Gaps = 8/236 (3%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | ||| ||||| | || ||||||||||||||||| |||| Sbjct 5109 TGCCTCCACGGAGACGAAGCACAAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCGG 5050 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| |||| |||||||| || |||||||| |||| ||||||||||| | | Sbjct 5049 CCAAGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAG 4990 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | |||||||| |||||| ||||| ||| | | | ||||| |||| Sbjct 4989 GGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC--- 4934 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || || || | || ||||| ||||| || || ||||| || ||||| ||||| || Sbjct 4933 TCGACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTT 4878 Score = 111 bits (122), Expect = 2e-19 Identities = 144/195 (74%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||| |||| |||||||| |||| ||||| ||||| ||||| || Sbjct 5527 TCCTTCTGGATATTGTAATCGGCCAGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCAAAG 5468 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | ||||||||| | ||| | | ||||||||| |||||| ||||| ||| Sbjct 5467 ATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 5409 Query 46523 G-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | |||||| |||| || || || | ||||| || || ||||| || ||||| Sbjct 5408 GTCGATCGTGTCGGAGCTC---TCGACTTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTT 5352 Query 46579 AACAAAGATTTGCAT 46593 || || || ||||| Sbjct 5351 GACGAATATCTGCAT 5337 Score = 111 bits (122), Expect = 2e-19 Identities = 144/195 (74%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||| |||| |||||||| |||| ||||| ||||| ||||| || Sbjct 5755 TCCTTCTGGATATTGTAATCGGCCAGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCAAAG 5696 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | ||||||||| | ||| | | ||||||||| |||||| ||||| ||| Sbjct 5695 ATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 5637 Query 46523 G-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | |||||| |||| || || || | ||||| || || ||||| || ||||| Sbjct 5636 GTCGATCGTGTCGGAGCTC---TCGACTTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTT 5580 Query 46579 AACAAAGATTTGCAT 46593 || || || ||||| Sbjct 5579 GACGAATATCTGCAT 5565 Score = 111 bits (122), Expect = 2e-19 Identities = 144/195 (74%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||| |||| |||||||| |||| ||||| ||||| ||||| || Sbjct 5983 TCCTTCTGGATATTGTAATCGGCCAGAGTGCGGCCGTCCTCGAGTTGCTTTCCGGCAAAG 5924 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | ||||||||| | ||| | | ||||||||| |||||| ||||| ||| Sbjct 5923 ATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 5865 Query 46523 G-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | |||||| |||| || || || | ||||| || || ||||| || ||||| Sbjct 5864 GTCGATCGTGTCGGAGCTC---TCGACTTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTT 5808 Query 46579 AACAAAGATTTGCAT 46593 || || || ||||| Sbjct 5807 GACGAATATCTGCAT 5793 Score = 107 bits (118), Expect = 2e-18 Identities = 166/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | ||||||||||||||| | || ||||| || || ||||| || | Sbjct 6249 TGCCACCCCTCAGACGCAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCG 6190 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || | | || || ||||||||||| ||||| ||||| ||||||||||| | || Sbjct 6189 CGAGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCG 6130 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | ||||||||| |||||| ||||| ||| | | | |||||| |||| Sbjct 6129 GAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCGGAGCTC--- 6074 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || || || || ||||| || ||||| || || || ||||| Sbjct 6073 TCGACCTCGAGGGTAATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 6021 Score = 102 bits (112), Expect = 9e-17 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||| || | | ||||| |||| ||||| ||||| || ||||| Sbjct 5299 TCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCTGCGAAG 5240 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | ||||||||| | ||| | | ||||||||| |||||| ||||| ||| Sbjct 5239 ATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 5181 Query 46523 G-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | |||||| |||| || || || | || ||||| ||||| || || ||||| Sbjct 5180 GTCGATCGTGTCGGAGCTC---TCAACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTT 5124 Query 46579 AACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 5123 CACGAAGATCTGCAT 5109 >seq18898 Length=1135434 Score = 105 bits (116), Expect = 8e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || | | |||||| |||| ||||||||||| ||| ||| Sbjct 158595 CTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTTCGGTGAA 158654 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||| ||| | || | | ||||||||| |||||| ||||| | Sbjct 158655 GATAAGCCGCTGCTAGTCCGATGGAATCCCTTCCTTGTCCTGGATCTTAGCCTTGACATT 158714 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | |||||| |||| ||||| || | |||||||| ||||| |||| ||||| Sbjct 158715 GTCGATCGTGTCGGAGCTC---TCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTT 158771 Query 46579 AACAAAGATTTGCAT 46593 |||||||| ||||| Sbjct 158772 CACAAAGATCTGCAT 158786 >seq5228 Length=576636 Score = 100 bits (110), Expect = 3e-16 Identities = 169/241 (70%), Gaps = 8/241 (3%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | || ||||| | || |||||| ||||| ||||| |||| Sbjct 487147 TGCCTCCGCGGAGACGAAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCGG 487088 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| |||| ||||||||||| || || || || | | ||||||||| | || Sbjct 487087 CCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCG 487028 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | ||||||||| |||||| ||| | ||| | | | ||||| |||| Sbjct 487027 GAATTCCCTCCTTGTCTTGGATCTTGGCCTTTA-CGTTGTCGATGGTGTCCGAGCTC--- 486972 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600 || || || | || || |||||||| |||| ||||| |||||||| ||||| | | || Sbjct 486971 TCGACTTCGAGAGTAATAGTTTTGCCGGTCAAGGTTTTCACAAAGATCTGCATATCGAAC 486912 Query 46601 A 46601 | Sbjct 486911 A 486911 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | || ||||| | || |||||| || || ||||| |||| Sbjct 487375 TGCCTCCGCGGAGACGAAGGACGAGATGGAGCGTTGACTCCTTCTGTATGTTGTAATCGG 487316 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| |||| ||||||||||| || || || || | | |||||| || | | Sbjct 487315 CCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGGG 487256 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | ||||||||| |||||| ||||| ||| | | | ||||| |||| Sbjct 487255 GGATTCCCTCCTTGTCTTGAATCTTCGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC--- 487200 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || || |||||||| ||||| ||||| || ||||||||||| Sbjct 487199 TCGACTTCGAGAGTAATAGTTTTGCCAGTCAGGGTTTTCACGAAGATTTGCAT 487147 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || |||||||| || || |||||||| ||||| |||| | ||||| |||| || Sbjct 536487 ACAAGATGCAAGGTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTGCGGCCGTCTTCC 536428 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | ||||| |||||||| |||| | ||||||||||| || | | ||||||||| | Sbjct 536427 AATTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGG 536368 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| ||| | | | | |||||| |||| || || || | || || || Sbjct 536367 ATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTC---TCGACCTCGAGGGTAATCGTC 536311 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || ||||| || ||||| ||||| Sbjct 536310 TTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 536279 Score = 82.4 bits (90), Expect = 9e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||| || | | ||||| |||| || || |||||||| || || Sbjct 487566 CTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAA 487507 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| | ||||||||| | || | | ||||||||| |||||| ||||| | Sbjct 487506 GATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGAATCTTCGCCTTGACGTT 487447 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | |||||| ||| || || || | || || || || || || || ||||| Sbjct 487446 ATCGATCGTGTCTGAACTC---TCAACCTCGAGGGTTATCGTCTTCCCGGTTAGGGTTTT 487390 Query 46579 AACAAAGATTTGCAT 46593 |||||||| ||||| Sbjct 487389 GACAAAGATCTGCAT 487375 >seq26449 Length=270109 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || | | |||||| ||| ||||||| ||| ||||||| Sbjct 202082 CTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCTGTCCTCGAGCTACTTTTCGGCGAA 202023 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCA-CGCTCTCCTTGTCCATGATCTTCTTCTTGAGCG 46520 || | ||||||||||| | || | | || ||||||||| |||||| ||||| Sbjct 202022 AATAAGCCGCTGCTGGTCCGGTGGAATCTCT-TCCTTGTCCTGGATCTTAGCCTTGACAT 201964 Query 46521 TCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | | |||| |||| ||||| || | |||||||| ||||| || | |||| Sbjct 201963 TGTCGATCATGTCGGAGCTC---TCCACCTCGAGAGTGATGGTCTTGCCGGTAAAAGTTT 201907 Query 46578 TAACAAAGATTTGCAT 46593 | |||||||| ||||| Sbjct 201906 TCACAAAGATCTGCAT 201891 >seq5117 Length=577398 Score = 93.3 bits (102), Expect = 5e-14 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| || ||| |||||| |||||||||||||| | | ||| ||| | || || Sbjct 107514 ACAAGATGTAAAGTAGACTCCTTCTGGATATTGTAGTCAGCCAAAGTACGCCCATCCTCC 107573 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || || || ||||| | |||||| || | || | | ||||||||| | Sbjct 107574 AGCTGCTTCCCAGCAAAAATCAACCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCCTGG 107633 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 || || ||| | | | | ||||| ||| || || |||| ||||||||| Sbjct 107634 ATTTTAGCCTTCACATTATCAATGGTGTCTGAACTC---TCAACCTCCAGGGTGATGGTT 107690 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || ||||||| || || || || || |||||| Sbjct 107691 TTTCCCGTCAATGTCTTCACGAAAATCTGCATT 107723 Score = 93.3 bits (102), Expect = 5e-14 Identities = 151/216 (70%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 |||||||| ||||| ||| ||||| || || ||||| || | || || | | | || Sbjct 107738 CAACACCAAATGCAGTGTGGATTCCTTCTGAATGTTGTAATCTGCAAGGGTCCTCCCATC 107797 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || ||||||||||| || || ||||| | ||||||||| | || | || |||||| || Sbjct 107798 TTCAAGCTGCTTGCCTGCAAAAATCAATCTCTGCTGGTCTGGTGGAATGCCCTCCTTATC 107857 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA---TTCCACATCCACCGTGAT 46557 |||||| ||| | | | | |||||| ||| || || |||| ||||| Sbjct 107858 TTGGATCTTGGCCTTCACATTATCAATCGTGTC---CGAACTCTCTACCTCCAGAGTGAT 107914 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || ||||| |||||||| Sbjct 107915 TGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 107950 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | ||| | ||| ||||||| || |||||| ||||| ||||| || | Sbjct 111336 CCTCCTCGAAGACGGAGCACAAGATGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGCA 111395 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | | || || || ||||| || || || ||||| | ||||||||| | || Sbjct 111396 AGAGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGA 111455 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCG---CTCGATTCC 46543 | | |||||| ||| |||||| ||| | | | | ||||| ||| || Sbjct 111456 ATCCCCTCCTTATCCTGGATCTTAGCCTTAACATTGTCAATTGTGTCCGAACTC---TCA 111512 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| ||||||||||| || || || || || ||||| || ||||| Sbjct 111513 ACCTCCAATGTGATGGTTTTCCCAGTGAGTGTCTTCACAAAAATCTGCAT 111562 >seq27442 Length=216269 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/148 (73%), Gaps = 6/148 (4%) Strand=Plus/Plus Query 46449 GCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCT 46508 |||| |||||||| |||| ||||||||||| | || | | ||||||||| ||||| Sbjct 102941 GCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGGAATCATTTCCTTGTCCTGGATCT 103000 Query 46509 TCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGC 46565 | ||||| | | | |||||| |||| ||||| || | |||||||| |||| Sbjct 103001 TAGCCTTGACATTGTCGATCGTGTCGGAGCTC---TCCACCTCGAGAGTGATGGTCTTGC 103057 Query 46566 CCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| ||||| |||||||| ||||| Sbjct 103058 CGGTCAAAGTTTTCACAAAGATCTGCAT 103085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565007139774120