Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20medica_20[genbank_20GCA_5F002013955.1_202017-03-03] 32,731 sequences; 404,954,971 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3895 147 4e-30 >seq3895 Length=609050 Score = 147 bits (162), Expect = 4e-30 Identities = 382/571 (67%), Gaps = 15/571 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| ||||||||||| || || || |||||||| || || ||||||| Sbjct 437444 ATTTGGGAAATGTACAAGAAAGCCGAAGCGTCGTTTTGGACCGCTGAGGAAGTTGATCTT 437503 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | | || | | |||| | || ||| || |||||| |||| || ||||| || Sbjct 437504 TCGCAAGATCTCCGCCACTGGGAGGCCCTAACCGCTGACGAGAAGCACTTCGTCAAGCAC 437563 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 ||| | || ||||| |||||||| || || || || |||||| || || || ||| Sbjct 437564 GTGCTCGCCTTCTTCGCAGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCGGAAGGTTC 437623 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT-TTCTACGGTTTCCAGATGGCCATCGA 25715 | | ||| || ||| || ||||| ||| |||||||| ||||| || |||||||| Sbjct 437624 ATGACGGAGGTCCAGGTCGCCGAGGCGC-GTGCCTTCTACGGCTTCCAAATCGCCATCGA 437682 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGA 25775 || | ||||| || |||| | |||||| || ||||| | |||| || ||| Sbjct 437683 GAACATCCACTCCGAAATGTACTCGCTGCTTCTAGAAACTTACATCAAAGACTCCGACGA 437742 Query 25776 GAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTG 25835 | | || || ||| ||||||||| | ||| || || | ||| || ||| Sbjct 437743 AAAGAACCGTCTCTTTCACGCCATCGAGACGGTTCCCTGCGTCGCAAAGAAAGCCACGTG 437802 Query 25836 GGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894 ||| | || |||||| || || | ||| || || | ||| | | | || |||| Sbjct 437803 GGCGTTAAATTGGATCGACGGCTCGGAG----ACTTTCGCGGAGAGATTAATCGCGTTTG 437858 Query 25895 CTGCTGTGGAGGGCATCTTTTTC--AGCG-GTTCGTTTGCGGCCATCTTCTGGCTCAAGC 25951 || |||||||| || || ||| || | ||| |||||| |||| || |||||||| Sbjct 437859 CTTGCGTGGAGGGGATTTTCTTCTCAGGGAGTT--TTTGCG-CCATATTTTGGCTCAAAA 437915 Query 25952 AGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || ||| ||||| ||| | || || || |||||| | ||| | || |||||| Sbjct 437916 AGCGCGGGTTAATGCC-GGGATTAACATTCTCAAACGAGTTAATCTCGCGAGATGAGGGT 437974 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 |||||| | ||||| || |||||| | |||| Sbjct 437975 CTCCACTGCGATTTCGCGTGCCTGTTGTACA 438005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928464774760640