Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq8 89.7 4e-13 >seq8 Length=22711823 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || || || | ||| |||||||||||| ||||| || | Sbjct 5299322 ACATGAGCAATCATGCATGTCAAGAGGGCATATGAAGCAATGTTAAACGGCACACCCAGG 5299381 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||||||||| || | ||||||| |||||| || | || |||| | ||||| || Sbjct 5299382 CCCATATCAGCAGAGCGCTGATACATTTGACATGATAACTCCCCATTAGCCACATAGAAC 5299441 Query 101876 TG 101877 || Sbjct 5299442 TG 5299443 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || || || | ||| |||||||||||| ||||| || | Sbjct 5317640 ACATGAGCAATCATGCATGTCAAGAGGGCATATGAAGCAATGTTAAACGGCACACCCAGG 5317699 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||||||||| || | ||||||| |||||| || | || |||| | ||||| || Sbjct 5317700 CCCATATCAGCAGAGCGCTGATACATTTGACATGATAACTCCCCATTAGCCACATAGAAC 5317759 Query 101876 TG 101877 || Sbjct 5317760 TG 5317761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361229873083844