Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 5e-11 >seq1 Length=28801852 Score = 84.2 bits (92), Expect = 5e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| || || |||| |||| |||||||| ||||||| || || ||| | || | Sbjct 4158177 GATTTTGACTATGATTATTTTGGCTTCAAAACCCTGGAGAGGTCCTACCTCTTGAAGGTC 4158236 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | || || | || ||| || || || ||||||||| | || ||||| ||||||||| Sbjct 4158237 CAAGGAAAAGTTGTAGAAAGACCCCAACATATGTTGATGAGGGTTGCTGTTGGGATTCAC 4158296 Query 248929 AAGGATGACATAGA 248942 ||||||||||| || Sbjct 4158297 AAGGATGACATTGA 4158310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073699758030592