Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 seq4 102 8e-17 seq3240 96.9 3e-15 seq2 91.5 1e-13 seq25 86.0 6e-12 >seq6 Length=21175815 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || |||||||||||||| |||||| || |||| ||||||||| || || || Sbjct 5335632 GTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCG 5335573 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| ||||| ||||| || || || || || || ||||| ||| || || Sbjct 5335572 GCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTG 5335513 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||||| | |||||| || | ||| | ||||||||||| | ||| Sbjct 5335512 ACGTTGTCGATTGTGTCGGAGCTCTCCACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTT 5335453 Query 139748 TTTACGAATATTTGCAT 139764 || || ||||| ||||| Sbjct 5335452 TTCACAAATATCTGCAT 5335436 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||| || || ||||| || || |||||| || |||| ||||||||||||| Sbjct 4450098 TGAAGCGTCGATTCCTTTTGGATATTGTAATCGGCCAAGGTGCGGCCGTCTTCGAGCTGT 4450157 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || || |||||||||| ||||| || ||||| || ||||| ||||| ||| || Sbjct 4450158 TTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCTTGGATCTTG 4450217 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | ||||||| | ||| || || | || | ||||||||||| Sbjct 4450218 GCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACTTCGAGAGTAATGGTCTTGCCGGTT 4450277 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||| ||||| || ||||| Sbjct 4450278 AGGGTTTTCACGAAGATCTGCAT 4450300 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||| || || ||||| || || |||||| || |||| ||||||||||||| Sbjct 4450326 TGAAGCGTCGATTCCTTTTGGATATTGTAATCGGCCAAGGTGCGGCCGTCTTCGAGCTGT 4450385 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || || |||||||||| ||||| || ||||| || ||||| ||||| ||| || Sbjct 4450386 TTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCTTGGATCTTG 4450445 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | ||||||| | ||| || || | || | ||||||||||| Sbjct 4450446 GCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACTTCGAGAGTAATGGTCTTGCCGGTT 4450505 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||| ||||| || ||||| Sbjct 4450506 AGGGTTTTCACGAAGATCTGCAT 4450528 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||| || || ||||| || || |||||| || |||| ||||||||||||| Sbjct 4450554 TGAAGCGTCGATTCCTTTTGGATATTGTAATCGGCCAAGGTGCGGCCGTCTTCGAGCTGT 4450613 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || || |||||||||| ||||| || ||||| || ||||| ||||| ||| || Sbjct 4450614 TTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCTTGGATCTTG 4450673 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | ||||||| | ||| || || | || | ||||||||||| Sbjct 4450674 GCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACTTCGAGAGTAATGGTCTTGCCGGTT 4450733 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||| ||||| || ||||| Sbjct 4450734 AGGGTTTTCACGAAGATCTGCAT 4450756 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||| || || ||||| || || |||||| || |||| ||||||||||||| Sbjct 4450782 TGAAGCGTCGATTCCTTTTGGATATTGTAATCGGCCAAGGTGCGGCCGTCTTCGAGCTGT 4450841 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || || |||||||||| ||||| || ||||| || ||||| ||||| ||| || Sbjct 4450842 TTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCTTGGATCTTG 4450901 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | ||||||| | ||| || || | || | ||||||||||| Sbjct 4450902 GCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACTTCGAGAGTAATGGTCTTGCCGGTT 4450961 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||| ||||| || ||||| Sbjct 4450962 AGGGTTTTCACGAAGATCTGCAT 4450984 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || |||||||||||||| |||||| || |||| ||||||||| || || || Sbjct 5316915 GTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCG 5316856 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| ||||| ||||| || || || || || || ||||| ||| || || Sbjct 5316855 GCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTG 5316796 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| | | |||||| || | || | ||| |||||||| | ||| Sbjct 5316795 ACGTTGTCGATTGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTT 5316736 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 5316735 TTCACGAAGATCTGCATA 5316718 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| ||||||||||| |||||| | || | || |||||||| || || Sbjct 12931882 GTGGACTCCTTTTGAATGTTGTAATCGGCGAGAGTCCGGCCATCCTCGAGCTGCTTGCCG 12931941 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || | ||||| || ||||| || || |||||||| ||| || || Sbjct 12931942 GCGAAGATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTTGTCCTGGATCTTGGCCTTC 12932001 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||||| | ||||||||| | ||| | |||||| ||||||||||| Sbjct 12932002 ACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTAATCGTCTTCCCGGTCAACGTC 12932061 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 12932062 TTGACGAAGATCTGCAT 12932078 Score = 96.9 bits (106), Expect = 3e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| ||| ||||| ||||||||||||||||| | || || ||||| Sbjct 13335164 ACCAAGTGAAGCGTCGACTCCTTTTGAATGTTATAATCTGCAAGCGTTCTGCCATCTTCC 13335105 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 | |||||||||||| | ||||| | |||||||||||||| |||||||| ||||| Sbjct 13335104 AATTGTTTACCAGCAAAAATCAGTCTCTGCTGATCGGGAGGAATGCCTTCCTTGTC 13335049 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||||||||||||| || || |||||||||| ||||| || ||||| || ||||| || Sbjct 4449917 GTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATTCCTTCCTT 4449976 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | ||||||| | ||| || || | || | Sbjct 4449977 GTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACTTCGAGAGTAAT 4450036 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||| | ||||| ||||| || ||||| Sbjct 4450037 GGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 4450072 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATC-GCTCATTGTGCTCGAGTCTTCGAGCTGTTTACC 139626 || ||||| || |||||||||||||| ||| | || | || || ||||| || || Sbjct 5235251 GTGGACTCCTTCTGAATGTTATAATCAGCT-AAAGTACGGCCATCCTCAAGCTGCTTCCC 5235193 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686 |||| |||| || | |||||||| || || || ||||| ||||| ||| | |||| | Sbjct 5235192 AGCAAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTC-CTGAATCTTTGCCT 5235134 Query 139687 TAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745 || | | || | || || | | ||||||||| | || | ||||| || ||||| | Sbjct 5235133 TAACATTATCAATAGTATCTGAGCTCTCCACCTCCAGAGTAATAGTCTTCCCAGTCAAGG 5235074 Query 139746 TTTTTACGAATATTTGCATA 139765 | || || ||||| |||||| Sbjct 5235073 TCTTGACAAATATCTGCATA 5235054 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| ||| | |||| || ||||| || || ||||||||||| | || || Sbjct 5235041 CGCAGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCCGCAAGAGTCCTTCCA 5234982 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || |||||||| ||||| |||||| ||| |||||||| || || || ||||| ||| Sbjct 5234981 TCCTCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGTGGAATTCCTTCCTTG 5234922 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||||||| || | | || | |||||| | | ||| || || | || | Sbjct 5234921 TCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTCTCAACTTCCAAAGTAATT 5234862 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || || || | || || || ||||| ||||| Sbjct 5234861 GTTTTCCCAGTAAGGGTCTTAACAAATATCTGCAT 5234827 >seq4 Length=19951838 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | || || || || || || ||||| || | ||||| || ||| Sbjct 7862094 ACCAAGTGGAGGGTTGATTCCTTCTGGATATTATAGTCAGCAAGTGTGCGACCATCCTCG 7862153 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||||||||||||| |||| || | |||||||| || || || ||||| ||||| | Sbjct 7862154 AGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTGG 7862213 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || ||||| | || | ||||||| | || ||||||| ||| | |||||| Sbjct 7862214 ATCTTGGCTTTTACATTATCAATGGTGTCGGAGCTTTCAACCTCAAGGGTTATTGTCTTG 7862273 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | ||||| || || |||||||| Sbjct 7862274 CCGGTGAGAGTTTTCACAAAGATTTGCAT 7862302 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||| | ||| ||||| | || ||||| || || |||||||||||| | ||||| | Sbjct 7833116 ACGAAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGCGAGTGTGCGCCC 7833175 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 || || ||||||||||||||| |||| || | |||||||| || || || ||||| || Sbjct 7833176 ATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATCCCTTCCTT 7833235 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || ||| | | || | || |||| | || ||||||| ||| | Sbjct 7833236 GTCCTGGATCTTAGCTTTGACATTATCAATGGTATCGGAGCTTTCAACCTCAAGGGTTAT 7833295 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || || || | || || || || |||||||| Sbjct 7833296 GGTTTTTCCAGTGAGAGTCTTCACAAAGATTTGCAT 7833331 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || ||||| | || ||||| || || ||||||||||| Sbjct 7861848 CCACCACGGAGACGGAGGACCAAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCAGCA 7861907 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||||| || |||||||||||||| ||| |||| || | || || || || || Sbjct 7861908 AGTGTGCGACCATCCTCGAGCTGTTTACCGGCAAAGATAAGTCTCTGTTGGTCTGGTGGG 7861967 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | || | ||| | | || | ||||||| | ||||| Sbjct 7861968 ATCCCTTCCTTGTC-TTGAATCTTGGCTTTCACATTGTCAATGGTGTCGGAGCTTTCCAC 7862026 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || | ||||||||| || | || ||||| || || |||||| Sbjct 7862027 CTCAAGAGTAATCGTCTTGCCAGTGAGGGTCTTTACAAAGATCTGCATA 7862075 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| || ||||| || || |||||||| || | |||| || ||| Sbjct 7828026 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGAGTGCGGCCATCCTCG 7828085 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 || ||||| |||||| |||| || | |||||| || || || || ||||| || || | Sbjct 7828086 AGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGG 7828145 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || ||||| | || | ||||| | | || ||||||| ||| | |||||| Sbjct 7828146 ATCTTGGCTTTTACATTATCAATGGTGTCAGAGCTTTCGACCTCAAGGGTTATGGTCTTG 7828205 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | || || || || |||||||| Sbjct 7828206 CCGGTGAGAGTCTTCACAAAGATTTGCAT 7828234 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTC 139614 || || |||| || || || || || ||||| || || | ||||| || | || || Sbjct 7861638 ACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGTCCA-TCCTC 7861696 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 || |||||||||||| |||| || | |||||| || || || || ||||| || || | Sbjct 7861697 TAGTTGTTTACCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTATC-CT 7861755 Query 139675 GATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733 || |||| | ||| | | || | ||||||| | |||||||||| ||| | |||| Sbjct 7861756 GAATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTCT 7861815 Query 139734 TGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || || | || ||||| || || |||||| Sbjct 7861816 TTCCAGTGAGGGTCTTTACAAAGATCTGCATA 7861847 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || ||| | || | ||| | || ||||| || ||||||||||| ||| Sbjct 7827780 CCACCTCTTAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCA 7827839 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || || ||||| |||||| | || || | |||||| || || || Sbjct 7827840 AGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGGG 7827899 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | || | ||| | | || | ||||||| | ||||| Sbjct 7827900 ATCCCTTCCTTGTC-CTGAATCTTGGCTTTGACATTGTCAATAGTGTCGGAGCTTTCCAC 7827958 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| ||| | || || || || | || ||||| || || |||||| Sbjct 7827959 CTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTTACAAAGATCTGCATA 7828007 >seq3240 Length=620 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||| | ||| ||||| | || ||||| || || |||||||||||| | ||||| | Sbjct 508 ACGAAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGCGAGTGTGCGCCC 449 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 || || ||||||||||||||| |||| || | |||||||| || || || ||||| || Sbjct 448 ATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATCCCTTCCTT 389 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || ||| | | || | || |||| | || ||||||| ||| | Sbjct 388 GTCCTGGATCTTAGCTTTGACATTATCAATGGTATCGGAGCTTTCAACCTCAAGGGTTAT 329 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || || || | || || || || |||||||| Sbjct 328 GGTTTTTCCAGTGAGAGTCTTCACAAAGATTTGCAT 293 >seq2 Length=30838379 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | || | ||| | || ||||| || || ||||| ||||| Sbjct 853254 GCCGCCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCAC 853313 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| | ||| || ||||| || || || ||||||| || ||||| || || || Sbjct 853314 CAAGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGG 853373 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| || | | | || | |||||| | |||||| Sbjct 853374 AATCCCTTCCTTGTCCTGGATCTTAGCCTCGACATTGTCGATCGTGTCGAAGCTCTCCAC 853433 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | |||||||||||||| ||||| || || || ||||| Sbjct 853434 CTCGAGAGTAATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCAT 853481 >seq25 Length=987425 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || || || || ||| || || | | |||||||||||| || || Sbjct 697576 GTCGACTCCTTCTGGATATTGTAGTCGGCCAAGGTTCGCCCGTCTTCGAGCTGCTTGCCG 697517 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || ||||| || || || ||||| || ||||| ||| || || Sbjct 697516 GCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 697457 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||||| || ||||||||| | || | ||||| || || | ||| Sbjct 697456 ACGTTGTCGATTGTGTCGGAGGACTCCACCTCCAACGTTATGGTCTTACCCGTTAGGGTT 697397 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 697396 TTCACGAAGATCTGCAT 697380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496033963324800