Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 4e-13 >seq6 Length=21175815 Score = 89.7 bits (98), Expect = 4e-13 Identities = 108/146 (74%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 19971 TTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATG 20029 || ||||| ||||||| | | ||||| ||||| || || || || || ||||| ||| Sbjct 13335194 TTGATCATAGTTCCTCCCCTGAGCCTCAGGACCAAGTGAAGCGTCGACTCCTTTTGAATG 13335135 Query 20030 TTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGT 20089 || ||||| | | ||| | ||||||||||||||| || ||| |||| || ||||| Sbjct 13335134 TTATAATCTGCAAGCGTTCTGCCATCTTCCAATTGTTTACCAGCAAAAATCAGTCTCTGC 13335075 Query 20090 TGATCGACGGGCACGCCTTCTTTGTC 20115 |||||| || | |||||| ||||| Sbjct 13335074 TGATCGGGAGGAATGCCTTCCTTGTC 13335049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419562429145164