Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq7 131 1e-25 seq2 131 1e-25 seq1 131 1e-25 seq4 125 5e-24 seq6 120 2e-22 seq20 93.3 3e-14 seq12 93.3 3e-14 seq58 86.0 4e-12 seq4703 82.4 5e-11 seq25 82.4 5e-11 >seq7 Length=32205869 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 23021882 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 23021823 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 23021822 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 23021788 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 25302935 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 25302994 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 25302995 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 25303029 >seq2 Length=30838379 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 1335960 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 1336019 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1336020 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1336054 >seq1 Length=28801852 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 28372885 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 28372826 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 28372825 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 28372791 >seq4 Length=19951838 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | || | |||||| ||||| || ||||| ||||| ||||| |||| Sbjct 7827550 TACCACCACGAAGGCGAAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAG 7827609 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | ||| | || |||| || ||||| ||||| || || | || ||||| | | Sbjct 7827610 CAAGGGTACGGCCATCTTCTAGCTGCTTTCCAGCAAAAATCAGTCTCTGCTGATCAGGAG 7827669 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || || |||||| ||| || ||| ||||| | || ||||| ||| |||| Sbjct 7827670 GGATTCCCTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATTGTATCAGAACTCTCAA 7827729 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || || ||||||||||| |||| ||||||||| ||||||||||| Sbjct 7827730 CTTCCAAGGTGATAGTTTTACCAGTCAGGGTTTTCACAAATATCTGCAT 7827778 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| ||||||||| |||||| ||||||||||| || | | | | | || || Sbjct 7827342 ACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAGTCGGCGAGGGTCCTTCCATCTTCA 7827401 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | || || || ||||| || || | || || || | |||| |||||| ||||| | Sbjct 7827402 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCTTGA 7827461 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || || ||||| | | |||||| ||| ||||||||||| ||||| || || Sbjct 7827462 ATCTTAGCTTTAACATTGTCAATAGTATCCGAACTCTCAACTTCTAAGGTAATGGTCTTG 7827521 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | || || || || || ||||| Sbjct 7827522 CCAGTAAGAGTCTTAACAAAGATTTGCAT 7827550 >seq6 Length=21175815 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || |||| ||||||||||| ||||||||| |||||| ||||| |||||||| | Sbjct 5317175 TACCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCG 5317116 Query 38149 ACAAAACACGTT-CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 ||| | || | || || | || || || ||||| || ||||| || ||||| | Sbjct 5317115 -CAAGCGTCCTTCCATCCTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGT 5317057 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 |||| |||||||| ||| |||||| ||| || || | | || || || || Sbjct 5317056 GGGATCCCTTCTTTATCCTGGATTTTTGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCG 5316997 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| | || || || || ||||||| |||||| ||||| |||||||| Sbjct 5316996 ACTTCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCAT 5316947 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || |||| ||||||||||| ||||||||| |||||| ||||| |||||||| | Sbjct 5335892 TACCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCG 5335833 Query 38149 ACAAAACACGTT-CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 ||| | || | || || | || || || ||||| || ||||| || ||||| | Sbjct 5335832 -CAAGCGTCCTTCCATCCTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGT 5335774 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 |||| |||||||| ||| |||||| ||| || || | | || || || || Sbjct 5335773 GGGATCCCTTCTTTATCCTGGATTTTTGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCG 5335714 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| | || || || || ||||||| |||||| ||||| |||||||| Sbjct 5335713 ACTTCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCAT 5335664 Score = 105 bits (116), Expect = 4e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||| | ||||| |||||| || |||||||| ||||||||||| | ||| || | Sbjct 4450769 ACGAAGCACCAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCGGCCAAGGTGCGGCC 4450828 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 ||| || | ||||||||||| || || || || || || || | |||| ||||| || Sbjct 4450829 GTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATTCCTTCCTT 4450888 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| || || ||| || || | || || || || || ||||| | ||||| Sbjct 4450889 GTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACTTCGAGAGTAAT 4450948 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTTACAAG 38327 || || || || | |||||||||||| |||||||| ||||| ||| Sbjct 4450949 GGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTTTTAAAAG 4450994 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | || | ||| | ||| || ||| |||||| ||||| || ||||||| Sbjct 5235282 ACCACCACGAAGGCGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAGC 5235223 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 ||| ||| | || || | || || || ||||| || || | || ||||| | || Sbjct 5235222 TAAAGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGG 5235163 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||||| |||||| ||| ||| ||| ||||| | | ||||||| || || || Sbjct 5235162 AATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATAGTATCTGAGCTCTCCAC 5235103 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | |||||||| || || |||||||| || || ||||||||||| Sbjct 5235102 CTCCAGAGTAATAGTCTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 5235055 Score = 98.7 bits (108), Expect = 7e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||| | ||||| |||||| || |||||||| ||||||||||| | ||| || | Sbjct 4450085 ACGAAGCACCAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCGGCCAAGGTGCGGCC 4450144 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 ||| || | ||||||||||| || || || || || || || | |||| ||||| || Sbjct 4450145 GTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATTCCTTCCTT 4450204 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| || || ||| || || | || || || || || ||||| | ||||| Sbjct 4450205 GTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACTTCGAGAGTAAT 4450264 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || | |||||||||||| ||||||||| Sbjct 4450265 GGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATG 4450301 Score = 98.7 bits (108), Expect = 7e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||| | ||||| |||||| || |||||||| ||||||||||| | ||| || | Sbjct 4450313 ACGAAGCACCAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCGGCCAAGGTGCGGCC 4450372 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 ||| || | ||||||||||| || || || || || || || | |||| ||||| || Sbjct 4450373 GTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATTCCTTCCTT 4450432 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| || || ||| || || | || || || || || ||||| | ||||| Sbjct 4450433 GTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACTTCGAGAGTAAT 4450492 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || | |||||||||||| ||||||||| Sbjct 4450493 GGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATG 4450529 Score = 98.7 bits (108), Expect = 7e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||| | ||||| |||||| || |||||||| ||||||||||| | ||| || | Sbjct 4450541 ACGAAGCACCAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCGGCCAAGGTGCGGCC 4450600 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 ||| || | ||||||||||| || || || || || || || | |||| ||||| || Sbjct 4450601 GTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATTCCTTCCTT 4450660 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| || || ||| || || | || || || || || ||||| | ||||| Sbjct 4450661 GTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACTTCGAGAGTAAT 4450720 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || | |||||||||||| ||||||||| Sbjct 4450721 GGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATG 4450757 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| |||| |||| |||| |||||| || |||||| || || || ||||| | Sbjct 5235055 TACCACCCCTCAGGCGCAGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCCG 5234996 Query 38149 ACAAAACACGTTCG-TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 ||| | | ||| || || | ||||| || || || || | || || ||||| | Sbjct 5234995 -CAAGAGTCCTTCCATCCTCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGT 5234937 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | ||||| ||||| |||||| ||| ||||| | | || ||| || ||| Sbjct 5234936 GGAATTCCTTCCTTGTCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTCTCA 5234877 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||| || ||||| ||||| || || | ||| || || |||||||||||| Sbjct 5234876 ACTTCCAAAGTAATTGTTTTCCCAGTAAGGGTCTTAACAAATATCTGCATG 5234826 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 |||||||| ||| || || ||||| || |||| ||| ||| |||| || |||||| Sbjct 5265605 TGAAGAGTTGACTCTTTCTGGATATTATAGTCAGCCAACGTACGGCCGTCTTCCAATTGT 5265546 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 ||||| ||||| || | | ||||||||| | |||| || || ||||| || || Sbjct 5265545 TTTCCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATCCCCTCCTTGTCTTGGATCTTG 5265486 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||| ||||| | | |||||| ||| || || || | || || || || || || Sbjct 5265485 GCCTTGACATTATCAATCGTATCTGAACTCTCCACCTCGAGAGTGATCGTCTTCCCAGTT 5265426 Query 38295 AAGGTTTTCACGAATATCTGCATG 38318 | |||||| ||||| ||||||||| Sbjct 5265425 AGGGTTTTGACGAAGATCTGCATG 5265402 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 |||||||| ||| || || || || || |||| ||| || |||| ||||||||| Sbjct 5327894 TGAAGAGTTGACTCTTTCTGGATGTTATAGTCAGCCAACGTGCGGCCGTCTTCTAATTGT 5327835 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || |||||||| || | | ||||||||| | |||| ||||| ||||| || || Sbjct 5327834 TTCCCGGCAAAGATCAATCTTTGTTGATCTGGTGGGATCCCTTCCTTGTCTTGGATCTTG 5327775 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||| ||||| | | ||||| ||| || || || | || || || || || || Sbjct 5327774 GCCTTGACATTATCAATCGTATCGGAACTCTCCACCTCGAGAGTGATCGTCTTCCCAGTT 5327715 Query 38295 AAGGTTTTCACGAATATCTGCATG 38318 | |||||| ||||| ||||||||| Sbjct 5327714 AGGGTTTTGACGAAGATCTGCATG 5327691 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| |||| |||||| |||| ||||||||| ||||| ||||| |||||||| | Sbjct 4449569 CCACCCCTCAGACGCAAAACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCG 4449628 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | | | || || | || || || || || || | || || || || | || Sbjct 4449629 AGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGA 4449688 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| |||||| || || ||| || || | || || || || || ||| Sbjct 4449689 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCGACT 4449748 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||||| || || ||||| | |||||| ||||||||||||||| Sbjct 4449749 TCGAGGGTAATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCATG 4449796 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 ||| | |||| || |||||||| |||||||| | |||| || |||| || | ||| Sbjct 5316922 ATGCAAAGTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTG 5316863 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 || |||||||| || || || || || || | || | || || |||||| || || Sbjct 5316862 CTTCCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTT 5316803 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 ||| || || | || || || || || ||||| | || || ||||| || || Sbjct 5316802 GGCCTTGACGTTGTCGATTGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGT 5316743 Query 38294 CAAGGTTTTCACGAATATCTGCATGTT 38320 | |||||||||||| |||||||| || Sbjct 5316742 TAGGGTTTTCACGAAGATCTGCATATT 5316716 Score = 84.2 bits (92), Expect = 1e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 |||||| || |||||| || || |||||||| | ||| || |||| || | || Sbjct 5234118 ATGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCGTCCTCGAGCTG 5234059 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 ||||| ||||| || || | || || || | || | || || ||||| || || Sbjct 5234058 CTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCGGAATTCCCTCCTTGTCTTGGATCTT 5233999 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 ||| || || | || || || || || ||||| | ||||||||||| || || Sbjct 5233998 GGCCTTTACGTTGTCGATGGTGTCCGAGCTCTCGACTTCGAGAGTAATAGTTTTTCCGGT 5233939 Query 38294 CAAGGTTTTCACGAATATCTGCAT 38317 ||||||||||||||| |||||||| Sbjct 5233938 CAAGGTTTTCACGAAGATCTGCAT 5233915 Score = 82.4 bits (90), Expect = 5e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185 |||||| || || |||||||| | ||| || | || || | || ||||| || || Sbjct 5234334 CTCCTTCTGTATGTTGTAATCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTTCCAGCGAA 5234275 Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 || || | || || || | ||||| || || ||||| ||| || ||| || || Sbjct 5234274 GATAAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGAATCTTCGCCTTGACGTT 5234215 Query 38246 CTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305 | || || || || || ||||| | ||||||||||| || |||| ||||||||| Sbjct 5234214 GTCGATGGTGTCGGAGCTCTCGACTTCGAGAGTAATAGTTTTGCCAGTCAGGGTTTTCAC 5234155 Query 38306 GAATATCTGCATG 38318 ||| ||||||||| Sbjct 5234154 GAAGATCTGCATG 5234142 Score = 82.4 bits (90), Expect = 5e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 |||||| || |||||| || ||||||||||||| ||| || |||| || | ||| Sbjct 5234574 ATGAAGGGTTGACTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCTTCCAGTTG 5234515 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 || || ||||| || || | || || || | ||||| || || ||||| ||| || Sbjct 5234514 CTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGAATCTT 5234455 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 ||| || || | || || ||| || ||||| || | || || || || || || Sbjct 5234454 CGCCTTAACGTTATCGATCGTGTCTGAGCTCTCAACCTCGAGGGTTATCGTCTTCCCGGT 5234395 Query 38294 CAAGGTTTTCACGAATATCTGCATG 38318 | |||||| || || ||||||||| Sbjct 5234394 TAGGGTTTTGACAAAGATCTGCATG 5234370 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185 |||||| || || |||||||| | ||| || | || || | ||| |||||||| || Sbjct 5265138 CTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAA 5265079 Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 || || || || ||||| | |||| || || |||||| || || ||| || || Sbjct 5265078 GATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 5265019 Query 38246 CTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305 | || || || || || ||||| | || || ||||| || || | ||||||||| Sbjct 5265018 GTCGATTGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTCAC 5264959 Query 38306 GAATATCTGCATGTT 38320 ||| |||||||| || Sbjct 5264958 GAAGATCTGCATATT 5264944 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | || | ||| || ||| |||||||||||| || ||||||| Sbjct 5317402 ACCACCACGAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCAGC 5317343 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 ||| ||| | || || | || || || ||||| || || | || ||||| | || Sbjct 5317342 TAAATTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGG 5317283 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||||| || ||| ||| || ||| ||||| | | ||||| ||| || || Sbjct 5317282 AATCCCTTCCTTATCCTGAATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCCAC 5317223 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | ||||| ||||| || || | || || ||||| |||||||| Sbjct 5317222 CTCCAGGGTAATTGTTTTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 5317175 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185 |||||| || || |||||||| | ||| || | || || | ||| |||||||| || Sbjct 5327427 CTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAA 5327368 Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 || || || || ||||| | |||| || || |||||| || || ||| || || Sbjct 5327367 GATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 5327308 Query 38246 CTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305 | || || || || || ||||| | || || ||||| || || | ||||||||| Sbjct 5327307 GTCGATTGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTCAC 5327248 Query 38306 GAATATCTGCATGTT 38320 ||| |||||||| || Sbjct 5327247 GAAGATCTGCATATT 5327233 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | || | ||| || ||| |||||||||||| || ||||||| Sbjct 5336119 ACCACCACGAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCAGC 5336060 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 ||| ||| | || || | || || || ||||| || || | || ||||| | || Sbjct 5336059 TAAATTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGG 5336000 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||||| || ||| ||| || ||| ||||| | | ||||| ||| || || Sbjct 5335999 AATCCCTTCCTTATCCTGAATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCCAC 5335940 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | ||||| ||||| || || | || || ||||| |||||||| Sbjct 5335939 CTCCAGGGTAATTGTTTTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 5335892 >seq20 Length=1106287 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 191179 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 191120 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 191119 GCCCGTATTTAGCCTT 191104 >seq12 Length=2762994 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 1313734 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 1313675 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 1313674 GCCCGTATTTAGCCTT 1313659 >seq58 Length=473374 Score = 86.0 bits (94), Expect = 4e-12 Identities = 58/65 (89%), Gaps = 5/65 (8%) Strand=Plus/Plus Query 25932 GATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGAT 25986 |||||||||||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct 282434 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 282493 Query 25987 GACGA 25991 ||||| Sbjct 282494 GACGA 282498 Score = 84.2 bits (92), Expect = 1e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 280553 CTCTCTTTTCAAAGTCCTTTTTGTCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 280612 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 280613 GCCCGTATTTAGCCTT 280628 >seq4703 Length=395 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185 |||||| || || |||||||| | ||| || | || || | ||| |||||||| || Sbjct 174 CTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAA 233 Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 || || || || ||||| | |||| || || |||||| || || ||| || || Sbjct 234 GATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 293 Query 38246 CTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305 | || || || || || ||||| | || || ||||| || || | ||||||||| Sbjct 294 GTCGATTGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTCAC 353 Query 38306 GAATATCTGCATGTT 38320 ||| |||||||| || Sbjct 354 GAAGATCTGCATATT 368 >seq25 Length=987425 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 38108 CACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167 ||||| || ||||| |||||| || |||||||| || | ||| || |||| || Sbjct 697589 CACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCGGCCAAGGTTCGCCCGTCTTC 697530 Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227 | || || ||||| || || ||||| || || || | |||| ||| || |||||| Sbjct 697529 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 697470 Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287 || || ||| || || | || || || || || || || || || || || Sbjct 697469 GATCTTCGCCTTGACGTTGTCGATTGTGTCGGAGGACTCCACCTCCAACGTTATGGTCTT 697410 Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 |||||| | |||||||||||| |||||||| || Sbjct 697409 ACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 697377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334927425973364