Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq4844 601 4e-167 seq2 280 2e-70 seq3 250 3e-61 seq20 161 1e-34 seq1 156 5e-33 seq8 87.8 2e-12 >seq4844 Length=160129 Score = 601 bits (666), Expect = 4e-167 Identities = 716/964 (74%), Gaps = 8/964 (1%) Strand=Plus/Minus Query 166081 AACCGTCTTTATGTTGGTTGGTTTGGCACACTGATGATTCCAACTCTGTTGGCAGCAACC 166140 ||||| ||||| ||||||||||||| ||||||| || ||| | ||| | ||||| Sbjct 1496 AACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1437 Query 166141 ATCTGT-TTCATCGTCGCTTTCGTAGCGGCACCTCCTGTCGATATCGATGGGATCCGTGA 166199 ||||| || || |||| ||| | || || ||||| || ||||| || || || ||||| Sbjct 1436 -TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGACGGTATTCGTGA 1378 Query 166200 GCCCGTAGCAGGCTCTCTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCC--C 166257 || || | || |||||| | ||||| ||||| || || |||||||| || | || | Sbjct 1377 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTAC 1318 Query 166258 TCCTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCAGCATCACTTGATGAA 166317 | || || || || ||| | || || || || || |||||||| ||||| |||||||| Sbjct 1317 TTCTGCA--GCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAA 1260 Query 166318 TGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAGTCTTCCACTTCCTCATCGGCATCTAT 166377 ||| | || || || ||||||| |||| | || | |||||| | | || | | Sbjct 1259 TGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCT 1200 Query 166378 GCCTACATGGGTCGTGAATGGGAATTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGC 166437 |||||||||||||| |||||| | || ||| || |||||||||||||||||| Sbjct 1199 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCT 1140 Query 166438 GTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGT 166497 || ||||| || || |||||||||||||| | || || ||| || |||| || ||||| Sbjct 1139 GTTGCATATTCAGCTCCTGTTGCAGCAGCGACTGCTGTTTTCTTGATCTACCCAATCGGT 1080 Query 166498 CAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTT 166557 ||||| ||| ||||| | ||||| || || ||| ||| || ||||| | |||| || Sbjct 1079 CAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATT 1020 Query 166558 GTCTTCCAAGCAGAGCACAACATCCTCATGCACCCCTTCCATATGCTGGGTGTAGCAGGT 166617 || ||||| || |||||||||||||| |||||||| ||||| ||| | || ||||| ||| Sbjct 1019 GTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCGTAGCTGGT 960 Query 166618 GTATTCGGTGGGTCACTTTTCTCGGCAATGCACGGCAGTCTCGTTACTTCCTCGCTCG-T 166676 |||||||| || || || ||| || ||||| || | || || || | | | | | Sbjct 959 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGAT 901 Query 166677 CCGTGAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGA 166736 | | || ||||| |||| ||| ||| || ||||||| || |||||||| ||||| Sbjct 900 CAGGGAAACCACAGAAAATGAATCTGCTAATGCAGGTTACAGATTCGGTCAAGAGGAAGA 841 Query 166737 GACCTACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTC 166796 || || || ||||| |||||||| ||||| || || || ||||||||||||| ||| Sbjct 840 AACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 781 Query 166797 CTTCAACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTG 166856 |||||||| ||||| || | || |||||||| || || |||||||| || |||||||| Sbjct 780 TTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGGTATCTG 721 Query 166857 GTTTACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCA 166916 ||| |||||| | ||| ||||||| ||||| |||||| | || |||||||| |||||||| Sbjct 720 GTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCA 661 Query 166917 GTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGATGTCCTCAACCGTGC 166976 || | | ||| |||| |||||||| | || || ||||| ||| | | || ||||| Sbjct 660 ATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCGTGC 601 Query 166977 TGGTCTGGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTTGC 167036 | || ||||||||||| ||||| || ||||||||||| ||||||||||| || || || Sbjct 600 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 541 Query 167037 TGCT 167040 |||| Sbjct 540 TGCT 537 Score = 520 bits (576), Expect = 1e-142 Identities = 728/1017 (72%), Gaps = 8/1017 (1%) Strand=Plus/Plus Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359 |||||| | ||||||||||| | | ||||| || || ||||| || |||||||| Sbjct 35835 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 35894 Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419 || | || ||||| ||| ||| | || | || || ||| | || ||||| || ||| Sbjct 35895 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTT 35954 Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACC--TTG--AGGGTGCTAATTT 167475 || || ||||||||||| || || || |||| | ||| ||| ||| | || Sbjct 35955 GTAACTTCATGGTATACCCATGGATTAGCC---AGTTCCTATTTGGAAGGCTGCAACTTC 36011 Query 167476 TCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTG 167535 | | || || ||||| || ||||||||| | | | | |||||| | | |||| || Sbjct 36012 T-TAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATG 36070 Query 167536 GGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTT 167595 ||||||||| | || || ||||| | | ||||| || | || || || ||| |||| Sbjct 36071 GGGTCCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTT 36130 Query 167596 TGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAG 167655 ||| || || ||||| || || | || ||||| || ||| | || |||||||| | Sbjct 36131 TGTTGCTCTACACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 36190 Query 167656 TAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTT 167715 | | || | || ||||| ||||| || || || |||| ||| |||||||| || Sbjct 36191 TCGCTCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTT 36250 Query 167716 TGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTT 167775 ||| ||||| || || || ||||| || || ||||| ||||||||||||| || || Sbjct 36251 TGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTT 36310 Query 167776 TGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCT 167835 |||||| || ||||||||| ||||| | || || | || || || ||||| ||||| | Sbjct 36311 TGGTGTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATT 36370 Query 167836 CAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAAT 167895 ||||| || ||||||||||||||||| ||| | | |||| ||| |||| | ||| || Sbjct 36371 GAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGTGCCAT 36430 Query 167896 CCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAA 167955 ||||| | ||| ||||| |||||| | | |||||||||||| |||||||| ||| Sbjct 36431 TCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCG 36490 Query 167956 AGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTG 168015 || ||| | | || || | || ||||| ||||| |||||||| |||||||| || || Sbjct 36491 TGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTG 36550 Query 168016 GTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTT 168075 ||||||||| ||||| ||||||| |||||| |||||||| || ||||||||| | || Sbjct 36551 GTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 36610 Query 168076 CGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCT 168135 || || || | || | |||| ||| || |||| | |||| || || || || || Sbjct 36611 TGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCT 36670 Query 168136 TCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAAC 168195 |||||||||||||| || || |||||| | | ||||| || ||||| || ||||| || Sbjct 36671 ACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGAC 36730 Query 168196 TTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGA 168255 |||||| || ||||| || || | || || || | ||||| |||||||| | ||| Sbjct 36731 TTTCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGA 36790 Query 168256 CCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 || || ||||||||| || ||||||| || || || | || | || |||||||| Sbjct 36791 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 36847 >seq2 Length=30838379 Score = 280 bits (310), Expect = 2e-70 Identities = 399/557 (72%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 166081 AACCGTCTTTATGTTGGTTGGTTTGGCACACTGATGATTCCAACTCTGTTGGCAGCAACC 166140 ||||| ||||| ||||||||||||| ||||||| || ||| | ||| | ||||| Sbjct 6214840 AACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 6214781 Query 166141 ATCTGT-TTCATCGTCGCTTTCGTAGCGGCACCTCCTGTCGATATCGATGGGATCCGTGA 166199 ||||| || || |||| ||| | | || ||||| || ||||| || || || ||||| Sbjct 6214780 -TCTGTATTTATTATCGCCTTCATTGTTGCTCCTCCAGTAGATATTGACGGTATTCGTGA 6214722 Query 166200 GCCCGTAGCAGGCTCTCTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCC--C 166257 | || | | |||||| | ||||| ||||| || || |||||||| || | || | Sbjct 6214721 ACTTGTTTCTGAATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTAC 6214662 Query 166258 TCCTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCAGCATCACTTGATGAA 166317 | || || || || ||| | || || || || || |||||||| ||||| |||||||| Sbjct 6214661 TTCTGCA--GCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAA 6214604 Query 166318 TGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAGTCTTCCACTTCCTCATCGGCATCTAT 166377 ||| | || || || ||||||| |||| | || | |||||| | | || | | Sbjct 6214603 TGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCT 6214544 Query 166378 GCCTACATGGGTCGTGAATGGGAATTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGC 166437 |||||||||||||| |||||| | || ||| | ||||||| |||||||||| Sbjct 6214543 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTATGGGTATGCATCCTTGGATTGTT 6214484 Query 166438 GTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGT 166497 || ||||| || || | |||||||||||| | | || ||| || |||| || | ||| Sbjct 6214483 GTTGCATATTCAGCTCTTGTTGCAGCAGCGACTACTGTTTTCTTGATCTACCCAATTGGT 6214424 Query 166498 CAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTT 166557 ||||| ||| ||||| | ||||| || || ||| ||| || ||||||| |||| || Sbjct 6214423 CAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATT 6214364 Query 166558 GTCTTCCAAGCAGAGCACAACATCCTCATGCACCCCTTCCATATGCTGGGTGTAGCAGGT 166617 || || | || |||||||||||||| |||||||| ||||| ||| | || |||| || Sbjct 6214363 GTATTATAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCATAGCTTGT 6214304 Query 166618 GTATTCGGTGGGTCACT 166634 ||||| || || || || Sbjct 6214303 GTATTTGGCGGCTCCCT 6214287 >seq3 Length=28715784 Score = 250 bits (276), Expect = 3e-61 Identities = 372/535 (70%), Gaps = 37/535 (7%) Strand=Plus/Minus Query 167814 AGGGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAG 167873 |||||||| |||| ||||| | ||||| || ||||||||||||||||| ||| | | | Sbjct 8270069 AGGGTTTC-ATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGG 8270011 Query 167874 GCGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATG 167933 ||| ||| |||| | ||| || ||||| | ||| ||||| |||||| | | |||||||| Sbjct 8270010 GCGCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATG 8269951 Query 167934 GTGA---------------------------------GCAAGC---AAACACTTTCAAAG 167957 |||| |||||| |||||| ||| | Sbjct 8269950 GTGATGGTGCAAACACATTACGTGTTTTTAACCCAACGCAAGCCGAAAACACATTCCGTG 8269891 Query 167958 CATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGGT 168017 | ||| | | || || | || ||||| ||||| |||||||| |||||||| || |||| Sbjct 8269890 CTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGT 8269831 Query 168018 CTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTCG 168077 ||||||| ||||| ||||||| |||||| |||||||| || ||||||||| | || | Sbjct 8269830 CTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 8269771 Query 168078 TTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTTC 168137 | || || | || | |||| ||| || |||| | |||| || || | || || | Sbjct 8269770 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCAAAACCTAC 8269711 Query 168138 GTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAACTT 168197 ||||||||||||| | || || ||| | | ||||| || ||||| || ||||| |||| Sbjct 8269710 GTGCTTATGACTTCATTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTT 8269651 Query 168198 TCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACC 168257 |||| || ||||| || || | || || || | ||||| |||||||| | ||| | Sbjct 8269650 TCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATC 8269591 Query 168258 AACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 | || ||||||||| || ||||||| || || || | || | || |||||||| Sbjct 8269590 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 8269536 Score = 104 bits (114), Expect = 3e-17 Identities = 218/321 (68%), Gaps = 8/321 (2%) Strand=Plus/Minus Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359 |||||| | ||||||||||| | | ||||| || || ||||| || |||||||| Sbjct 8270427 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 8270368 Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419 || | || ||||| ||| ||| | || | || || ||| | || ||||| || ||| Sbjct 8270367 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTT 8270308 Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTAC--CTTG--AGGGTGCTAATTT 167475 || || ||||||||||| || || | | |||| | ||| ||| ||| || || Sbjct 8270307 GTAACTTCATGGTATACCCATGGATTAG---CCAGTTCCTATTTGGAAGGCTGC-AACTT 8270252 Query 167476 TCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTG 167535 | || || ||||| || |||||| || | | | | |||||| | | |||| || Sbjct 8270251 CTTAACCGCCGCAGTTTCGACTCCTACTAATAGTTTAGCGCATTCTTTGTTGTTACTATG 8270192 Query 167536 GGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTT 167595 ||||| ||| | || || ||||| | | ||||| || | || || || ||| |||| Sbjct 8270191 GGGTCTTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTT 8270132 Query 167596 TGTGGCGCTCCACGGAGCCTT 167616 ||| || ||||||| || || Sbjct 8270131 TGTTGCTTTCCACGGTGCTTT 8270111 >seq20 Length=1106287 Score = 161 bits (178), Expect = 1e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 166851 TATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTT 166910 || |||||| |||||| | ||| ||||||| ||||| |||||| | || |||||||| || Sbjct 251043 TAACTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTT 250984 Query 166911 CAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGATGTCCTCAA 166970 |||||| || | | ||| |||| |||||||| | || || ||||| ||| | | || Sbjct 250983 CAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAA 250924 Query 166971 CCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGA 167030 |||||| || ||||||||||| ||||| || ||||||||||| ||||||||||| || Sbjct 250923 TCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 250864 Query 167031 TCTTGCTGCTGCTGAGTCCACTCCTGT 167057 || |||||| ||| || || |||| Sbjct 250863 CCTAGCTGCTATTGAAGCCCCTGCTGT 250837 >seq1 Length=28801852 Score = 156 bits (172), Expect = 5e-33 Identities = 206/286 (72%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 168027 TTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTCGTTCCTGTCA 168086 |||| ||||| | |||||| |||||||| || || |||||| | || || || || | Sbjct 21789399 TTGGGGTTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAA 21789340 Query 168087 TGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTTCGTGCTTATG 168146 || | |||| ||| || |||| | |||| || || || || || |||||||||| Sbjct 21789339 CCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATG 21789280 Query 168147 ACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAACTTTCTATACGA 168206 |||| || || |||||| | | ||||| || ||||| || ||||| |||||||| || | Sbjct 21789279 ACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAA 21789220 Query 168207 AAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCAACCACATG 168266 |||| || || | || || || | ||||| |||||||| | ||| || || |||| Sbjct 21789219 AAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATG 21789160 Query 168267 AAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 ||||| || ||||||| || || || | || | || |||||||| Sbjct 21789159 AAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 21789114 Score = 156 bits (172), Expect = 5e-33 Identities = 206/286 (72%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 168027 TTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTCGTTCCTGTCA 168086 |||| ||||| | |||||| |||||||| || || |||||| | || || || || | Sbjct 21790586 TTGGGGTTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAA 21790527 Query 168087 TGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTTCGTGCTTATG 168146 || | |||| ||| || |||| | |||| || || || || || |||||||||| Sbjct 21790526 CCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATG 21790467 Query 168147 ACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAACTTTCTATACGA 168206 |||| || || |||||| | | ||||| || ||||| || ||||| |||||||| || | Sbjct 21790466 ACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAA 21790407 Query 168207 AAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCAACCACATG 168266 |||| || || | || || || | ||||| |||||||| | ||| || || |||| Sbjct 21790406 AAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATG 21790347 Query 168267 AAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 ||||| || ||||||| || || || | || | || |||||||| Sbjct 21790346 AAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 21790301 >seq8 Length=22711823 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 167754 GTTGGTTCTTTGCACCGTCGTTT-GGTGTTGCAGCGATATTTAGATTCCTACTATTCCTA 167812 |||| ||||||| || |||||| ||||| | |||||||| | ||| | || || | Sbjct 5468307 GTTGATTCTTTGAGCC-TCGTTTTGGTGTAGTGACGATATTTCGGTTCATCCTTTTTTTC 5468365 Query 167813 CAGGGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTA 167872 || || | |||| | ||| | || || || ||||||||||||||||||||| | || Sbjct 5468366 CAAGGGTCTTATAAGTAGACATTAAATCCCTTTCATATGATGGGAGTTGCTGGTGTATTA 5468425 Query 167873 GGCGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTCTGTATGAAGAT 167932 || | || ||| | ||| || ||||| ||| |||| |||||| | | ||||||| Sbjct 5468426 GGTGATGTTCAGCTATGTGCTATTCATGGCACTACTATAGAAAATACTTTATTTGAAGAT 5468485 Query 167933 GGTGA 167937 | ||| Sbjct 5468486 GCTGA 5468490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567197654102400