Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq4844 711 0.0 seq2 331 1e-85 seq3 246 4e-60 seq20 176 6e-39 seq1 149 8e-31 seq8 111 2e-19 seq7 89.7 6e-13 >seq4844 Length=160129 Score = 711 bits (788), Expect = 0.0 Identities = 752/988 (76%), Gaps = 2/988 (0%) Strand=Plus/Plus Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593 |||||| ||||| ||||||||||| ||||||||||| || ||||| |||||||| ||||| Sbjct 537 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 596 Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653 |||||| || | | || |||||||| || | ||||||||||||| ||||| | Sbjct 597 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTAC 656 Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713 || |||||||| |||||||| || | |||||| ||||| ||||||| ||| | |||||| Sbjct 657 AGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCAGT 716 Query 7714 GAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTT 7773 ||||||||| || || || ||||| || || |||||||| || | ||||| || ||||| Sbjct 717 GAACCAGATACCTACTACAGGCCAAGCAGCCAGGAAGAAATGTAAAGAACGAGAATTGTT 776 Query 7774 GAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTA 7833 ||| ||| ||||||||||||| || ||||| || ||||||||||| ||||| || || Sbjct 777 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACGATATTATA 836 Query 7834 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTC 7893 || ||||| ||||||||||| | ||||| || || ||| || |||||||| Sbjct 837 AGTTTCTTCCTCTTGACCGAATCTGTAACCTGCATTAGCAGATTCATTTTCTGTGGTTTC 896 Query 7894 ACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAA 7953 | | || | ||||||||| | ||||||||||| |||||||| || || || || || Sbjct 897 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 956 Query 7954 GACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 8013 |||||||| ||||| | ||||||||| |||||||| |||||||||||||| || ||||| Sbjct 957 TACACCAGCTACGCCTAACATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 1016 Query 8014 GACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACC 8073 |||| |||| | ||||| ||||||||||| || ||||||||| | ||||| ||| || Sbjct 1017 TACAATCATGAAATTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCC 1076 Query 8074 TTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGC 8133 |||||||| || |||| | ||| ||||||| ||||| ||||| ||||| || ||||| Sbjct 1077 TTGACCGATTGGGTAGATCAAGAAAACAGCAGTCGCTGCTGCAACAGGAGCTGAATATGC 1136 Query 8134 TACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTA 8193 ||| ||||| ||||||||||| |||||| || |||||||||||||||||||||||| Sbjct 1137 AACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTA 1196 Query 8194 TGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAG 8253 | | ||| | | |||||| | | || || | ||||||| || ||||| | Sbjct 1197 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAA 1256 Query 8254 CCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGA 8313 ||| ||||||| || || |||||||| || || || || || | ||| ||||| ||| Sbjct 1257 CCATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAATGCAAACCTATAGCTGCAGA 1316 Query 8314 AGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGG 8373 || ||||| || |||||||| || || ||||| ||||| | || || |||| || || Sbjct 1317 AGTAGGAATAATCGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGG 1376 Query 8374 TTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAA 8432 |||||| || |||||||| || || ||||||||||| | ||| |||| || || ||| | Sbjct 1377 TTCACGAATACCGTCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACAGA 1436 Query 8433 TAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGAT 8492 || || | | | ||||| ||||||| ||||| |||||||| | || || || | Sbjct 1437 -AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCAACCAATGTAAAGGCGGT 1495 Query 8493 TGTTGGTGGAGGTTACCCAGTTACAGAA 8520 | | ||| |||| |||||||||||| Sbjct 1496 TTTCAGTGCTAGTTATCCAGTTACAGAA 1523 Score = 545 bits (604), Expect = 3e-150 Identities = 731/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | || | || || ||||| |||| || ||||||||| || ||||| Sbjct 36847 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 36788 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | |||||||| ||||| | ||| || || || || || || || || ||||| ||| Sbjct 36787 TGAGCCGCCATCCAAGCACGAATACCCTCGTTTAAAAGAATATTTTTTGTGTAGAAAGTC 36728 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| || || ||||| ||||||||||| | ||| Sbjct 36727 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAAGCACGTAGG 36668 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || || || || || | | |||| | |||| | ||| | || || ||||| Sbjct 36667 TTCAGGGCTAGGCCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTACAAAT 36608 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 | |||||||||||||| |||||| |||||| || || | |||||||| |||||||| Sbjct 36607 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGAGACCAA 36548 Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622 || || ||||| ||||||||||||||||| || || |||| || || | ||| || | Sbjct 36547 AAGCGGTTAGCGGTGACCATCGAATAGGTTTCTTCGGCTTGCGTTGGGTTAAAAGCACGG 36488 Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682 || || |||| |||||||||||||| |||||||| ||||| ||||| || ||||| Sbjct 36487 AATGTGTTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACGGTAGCGCCATGAATG 36428 Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742 ||||| |||| || | || || | ||| || || |||||||||||||| ||||| | Sbjct 36427 GCACATAGCAGAGCAGCGCCCAATACACCGGCAACTCCCATCATATGAAAGGGGTTCAAT 36368 Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802 ||||| || || || || || | || || | ||| || |||||||| || |||||||| Sbjct 36367 GTCCAATTATGAAACCCTTGGAAAAAAAGGATGAATCGAAATATCGCCGCTACACCAAAA 36308 Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862 |||||||||||||||| ||||| || || ||||| || || || ||||| ||||| Sbjct 36307 CTAGGCGCAAAGAACCAACCAGACTGACCTAGTGGATAAATCAGGAATACAGAAACAAAA 36248 Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921 |||||||| ||| |||| || || |||||||| || || || | | || ||| || || Sbjct 36247 ACAGCAATTGGAGCAGAGAATGCTATTGCATTATAAGGTCGCA-ATTGAACAGAGCGAGC 36189 Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981 | ||||| || || | |||||||||||| || | || || ||||| || || ||||| Sbjct 36188 AAGTTCAAATTGACGTAACATGAAACCTATTAGTCCGAAAGCACCGTGTAGAGCAACAAA 36129 Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041 || ||| || || || | ||| |||||| |||||||| || ||||| |||||||| Sbjct 36128 AGTCCAAAGACCGCCTAATTGACACCAGCGAGTAAAATCTCCTTGTGCTTCAGGACCCCA 36069 Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101 ||| | | | ||||| | | | | ||||||||| || || || || || | ||| Sbjct 36068 TAGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTCGAAACTGCGGCGGTTAAGAA 36009 Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161 || || || || | ||| ||| || | || || || ||||| || || || || Sbjct 36008 GTTGCAGCCTTCCAAATAGGAACTGGCTAATCCATGGGTATACCATGAAGTTACAAAGGT 35949 Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221 |||||| |||| |||||| || | || | || ||| ||| || || | || || || Sbjct 35948 TGTGCCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGGCCAGA 35889 Query 7222 CCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATCGAGTACATCAAA 7275 |||||| ||||||||||| | || | | | ||||||||| | | |||||| Sbjct 35888 CCAACCTACAAAAACGAATCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 35835 >seq2 Length=30838379 Score = 331 bits (366), Expect = 1e-85 Identities = 399/540 (74%), Gaps = 2/540 (0%) Strand=Plus/Plus Query 7940 AGAGAACCACCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTG 7999 || || || ||||| |||| ||| | ||| | ||||||||| |||||||| ||||||||| Sbjct 6214287 AGGGAGCCGCCAAATACACAAGCTATGCCTAACATGTGGAATGGGTGCATAAGGATGTTG 6214346 Query 8000 TGCTCTGCTTGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCG 8059 ||||| || | || |||| |||| ||||||| ||||||||||| || ||||||||| | Sbjct 6214347 TGCTCAGCCTATAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCA 6214406 Query 8060 TCAGAGAAAGAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACT 8119 ||||| ||| |||||||| | || |||| | ||| |||| || ||||| ||||| Sbjct 6214407 TCAGAAAAACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGTAGTCGCTGCTGCAACA 6214466 Query 8120 GGAGCAGAGTATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCAC 8179 |||| || ||||| ||| ||||| ||| ||||||| | |||| || |||||||||| Sbjct 6214467 AGAGCTGAATATGCAACAACAATCCAAGGATGCATACCCATACGGAAACTAAGTTCCCAC 6214526 Query 8180 TCACGACCCATGTATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGA 8239 |||||||||||||| | | ||| | | |||||| | | || || | ||||| Sbjct 6214527 TCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGA 6214586 Query 8240 CCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGA 8299 || || ||||| | ||| ||||||| || || |||||||| || || || || || | | Sbjct 6214587 CCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAATGCAAA 6214646 Query 8300 CCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGC 8359 || ||||| ||||| ||||| || |||||||| || || ||||| ||||| | || Sbjct 6214647 CCTATAGCTGCAGAAGTAGGAATAATCGCACCAGAAATAATATTGTTTCCATAAAGTAGA 6214706 Query 8360 GAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCG 8419 || ||| || ||||||| || |||||||| || || ||||||||| | | ||| ||| Sbjct 6214707 GATTCAGAAACAAGTTCACGAATACCGTCAATATCTACTGGAGGAGCAACAATGAAGGCG 6214766 Query 8420 ACGATGAA-ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACC 8478 | || || ||| | || || | | | ||||| ||||||| ||||| |||||||| Sbjct 6214767 ATAATAAATACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCAACC 6214825 >seq3 Length=28715784 Score = 246 bits (272), Expect = 4e-60 Identities = 372/533 (70%), Gaps = 36/533 (7%) Strand=Plus/Plus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | || | || || ||||| |||| || ||||||||| || ||||| Sbjct 8269536 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 8269595 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | |||||||| ||||| | ||| || || || || || || || || ||||| ||| Sbjct 8269596 TGAGCCGCCATCCAAGCACGAATACCCTCGTTTAAAAGAATATTTTTTGTGTAGAAAGTC 8269655 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| ||||| |||| ||||||||||| | ||| Sbjct 8269656 TCAAATTCAGGATCTTCCGCTGCACAGATTTCTTGGGAAATGAAGTCATAAGCACGTAGG 8269715 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || | || || || | | |||| | |||| | ||| | || || ||||| Sbjct 8269716 TTTTGGGCTAGGCCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTACAAAT 8269775 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 | |||||||||||||| |||||| |||||| || || | |||||||| |||||||| Sbjct 8269776 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGAGACCAA 8269835 Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAA------- 6615 || || ||||| ||||||||||||||||| || || |||| || || | ||| Sbjct 8269836 AAGCGGTTAGCGGTGACCATCGAATAGGTTTCTTCGGCTTGCGTTGGGTTAAAAGCACGG 8269895 Query 6616 ----------CGCCTTG---------AAA-----GT-ATTTGATTG----TTCACCATCT 6646 || |||| ||| || || || ||| ||||||||| Sbjct 8269896 AATGTGTTTTCGGCTTGCGTTGGGTTAAAAACACGTAATGTGTTTGCACCATCACCATCT 8269955 Query 6647 TCAAACAAAGTATTCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCTCCACCTAAG 6706 ||||| |||||||| ||||| ||||| || ||||| ||||| |||| || | || || Sbjct 8269956 TCAAATAAAGTATTTTCTACGGTAGCGCCATGAATGGCACATAGCAGAGCAGCGCCCAAT 8270015 Query 6707 ATACCTGCTACACCCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAGCC 6759 | ||| || || |||||||||||||| ||||| | ||||| || || || || Sbjct 8270016 ACACCGGCAACTCCCATCATATGAAAGGGGTTCAATGTCCAATTATGAAACCC 8270068 Score = 116 bits (128), Expect = 5e-21 Identities = 216/317 (68%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 6959 AAGGCTCCGTGGAGCGCCACAAAAGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAA 7018 || || ||||||| || ||||||| ||| || || || | ||| |||||| ||| Sbjct 8270111 AAAGCACCGTGGAAAGCAACAAAAGTCCAAAGACCGCCTAATTGACACCAGCGAGTAAAA 8270170 Query 7019 TCTCCCTGAGCTTCTGGACCCCATAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGA 7078 ||||| || ||||| |||||||||| | | | ||||| | | | | || |||| Sbjct 8270171 TCTCCTTGTGCTTCAAGACCCCATAGTAACAACAAAGAATGCGCTAAACTATTAGTAGGA 8270230 Query 7079 GTTGATACAGCAGCAGTAAGGAAATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGA 7138 || || || || || || | ||| || || || || | ||| ||| || | || || Sbjct 8270231 GTCGAAACTGCGGCGGTTAAGAAGTTGCAGCCTTCCAAATAGGAACTGGCTAATCCATGG 8270290 Query 7139 GTGTACCAGCTCGTGACGAAAGTTGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCA 7198 || ||||| || || || |||||||| |||| |||||| || | || | || ||| Sbjct 8270291 GTATACCATGAAGTTACAAAGGTTGTGCCTGTGAACCAACCCCCTAAAGCGAAATAGGCA 8270350 Query 7199 GTAGGGAACAGAAGAAGACCTGACCAACCAACAAAAACGAACCTATCACGCTTAAGCCAG 7258 ||| || || | || || |||||||| ||||||||||| | || | | | |||| Sbjct 8270351 CAAGGAAAGAGCAATAGGCCAGACCAACCTACAAAAACGAATCGGTCCCTCCGTAACCAG 8270410 Query 7259 TCATCGAGTACATCAAA 7275 ||||| | | |||||| Sbjct 8270411 TCATCCATAATATCAAA 8270427 >seq20 Length=1106287 Score = 176 bits (194), Expect = 6e-39 Identities = 151/187 (81%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593 |||||| ||||| ||||||||||| ||||||||||| || ||||| |||||||| ||||| Sbjct 250854 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 250913 Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653 |||||| || | | || |||||||| || | ||||||||||||| ||||| | Sbjct 250914 GTTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTAC 250973 Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713 || |||||||| |||||||| || | |||||| ||||| ||||||| ||| | |||||| Sbjct 250974 AGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCAGT 251033 Query 7714 GAACCAG 7720 ||||||| Sbjct 251034 GAACCAG 251040 >seq1 Length=28801852 Score = 149 bits (164), Expect = 8e-31 Identities = 195/270 (72%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | || | || || ||||| |||| || ||||||||| || ||||| Sbjct 21789114 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 21789173 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | |||||||| ||||| | ||| || || || || || || || || ||||| ||| Sbjct 21789174 TGAGCCGCCATCCAAGCACGAATACCCTCGTTTAAAAGAATATTTTTTGTGTAGAAAGTC 21789233 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| || || ||||| ||||||||||| | ||| Sbjct 21789234 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAAGCACGTAGG 21789293 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || || || || || | | |||| | |||| | ||| | || || ||||| Sbjct 21789294 TTCAGGGCTAGGCCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTACAAAT 21789353 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTG 6532 | |||||| ||||||| |||||| |||||| Sbjct 21789354 AACATAAAAAAATGTAACCAACGTTTATTG 21789383 Score = 149 bits (164), Expect = 8e-31 Identities = 195/270 (72%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | || | || || ||||| |||| || ||||||||| || ||||| Sbjct 21790301 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 21790360 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | |||||||| ||||| | ||| || || || || || || || || ||||| ||| Sbjct 21790361 TGAGCCGCCATCCAAGCACGAATACCCTCGTTTAAAAGAATATTTTTTGTGTAGAAAGTC 21790420 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| || || ||||| ||||||||||| | ||| Sbjct 21790421 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAAGCACGTAGG 21790480 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || || || || || | | |||| | |||| | ||| | || || ||||| Sbjct 21790481 TTCAGGGCTAGGCCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTACAAAT 21790540 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTG 6532 | |||||| ||||||| |||||| |||||| Sbjct 21790541 AACATAAAAAAATGTAACCAACGTTTATTG 21790570 >seq8 Length=22711823 Score = 111 bits (122), Expect = 2e-19 Identities = 137/185 (74%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 6638 TCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCT 6697 ||| |||||||||| |||||||| |||| ||||| || ||||||||||| ||| | Sbjct 5468490 TCAGCATCTTCAAATAAAGTATTTTCTATAGTAGTGCCATGAATAGCACATAGCTGAACA 5468431 Query 6698 CCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAG 6757 ||||||| | ||| || || |||||||||||||| || || | ||| | || | | Sbjct 5468430 TCACCTAATACACCAGCAACTCCCATCATATGAAAGGGATTTAATGTCTACTTATAAGAC 5468371 Query 6758 CCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACC-AAACGACGGCGCAAAGAA 6816 || || | || || | ||| || ||||||| | ||||| |||||| ||| ||||||| Sbjct 5468370 CCTTGGAAAAAAAGGATGAACCGAAATATCGTCACTACACCAAAACGA-GGCTCAAAGAA 5468312 Query 6817 CCAAC 6821 |||| Sbjct 5468311 TCAAC 5468307 Score = 100 bits (110), Expect = 4e-16 Identities = 140/195 (72%), Gaps = 5/195 (3%) Strand=Plus/Plus Query 6638 TCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCT 6697 ||| |||| ||||| ||||||| |||| |||||| | ||||||||||| |||| || Sbjct 6304327 TCATCATCCTCAAATTAAGTATTTTCTATAGTAGCGCTATGAATAGCACATAGCAGAGCA 6304386 Query 6698 CCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAG 6757 | || || | || || || |||||||||||||| ||||| | ||||| || | | Sbjct 6304387 GCGCCCAATACACAGGCAACTCCCATCATATGAAAGGGGTTCAATGTCCACTTATAAGAC 6304446 Query 6758 CCCTG----TAGGAAG-AGTAAGAAGCGGAATATCGCTGCAACACCAAACGACGGCGCAA 6812 || || | |||| || | ||| || ||||| || | |||||||| ||||||| Sbjct 6304447 CCTTGAAAAAAAGAAGAAGGATGAACCGTAATATTGCCACTACACCAAAACTAGGCGCAA 6304506 Query 6813 AGAACCAACTGGACT 6827 ||||| ||| |||| Sbjct 6304507 AGAACTAACAAGACT 6304521 Score = 82.4 bits (90), Expect = 9e-11 Identities = 137/193 (71%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 6638 TCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCT 6697 ||||||||||||| ||| | || |||||| ||||||| ||||||||||| ||||| | Sbjct 6321229 TCACCATCTTCAACTAAATTTTTTTCTACAATAGCACCATGAATAGCACATAGCAAAACA 6321288 Query 6698 CCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAG 6757 || || | ||| | | | ||||||||||| || || | ||||| || || Sbjct 6321289 ACATGAAATACACC-GAAAACTCTATCATATGAAAGGGATTTAATGTCCAATTACAAAAC 6321347 Query 6758 CCCTGTA--GGAAGAGTAAGAAGCGGAATATCGCTGCAACACC-AAACGACGGCGCAAAG 6814 || || | || || | ||| || |||||||| | ||||| |||| || || | ||| Sbjct 6321348 CCTTGGAACAAAAAAGGATGAATCGAAATATCGCCACTACACCAAAACTAC-GCACGAAG 6321406 Query 6815 AACCAACTGGACT 6827 ||||||| |||| Sbjct 6321407 AACCAACCAGACT 6321419 >seq7 Length=32205869 Score = 89.7 bits (98), Expect = 6e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 10205 AGTAAAGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACAC 10264 ||| ||||||| || |||| | | || ||||||||| | ||||| | || | Sbjct 17161742 AGTTAAGTTCAGATTCCTTGTGTGTATAAATCACACAATCTGATTTTGGATATGCAATGC 17161801 Query 10265 AGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTGAT 10324 | || || | |||| || ||||||| |||||||||||| ||| ||| ||| | Sbjct 17161802 ATGTAAGGACATAACCTTTCTCCATCTGGTTATCATCAAGGAATGATCCATCTGATTGGT 17161861 Query 10325 CTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAGT 10384 | || | || || | | ||| || ||| | || ||||||||||| ||||| |||| Sbjct 17161862 CAACAGAGCCTGAAACCATCAGGCCAGCGCAAGTAGAGCAGGCACCAGCGCGGCATGAGT 17161921 Query 10385 AGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGATCGTC 10436 || ||| || || || || |||||||||| || || ||||| |||||| Sbjct 17161922 AGGGGAGCTCCATTCCGGCATCTTCAGCAGAGTCGAGGATGTAAGCATCGTC 17161973 Score = 82.4 bits (90), Expect = 9e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 10203 TCAGTAAAGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAAC 10262 ||||||||||||| || |||| | | || |||||||| || ||||| | ||| Sbjct 17163772 TCAGTAAAGTTCAGATTCCTTGTGTGTGTAAATTACACAATCCGATGTAGGATATGCAAC 17163831 Query 10263 ACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTG 10322 || || || | ||||| || ||||| | |||||||||||| ||| ||| ||| Sbjct 17163832 GCATGTAAGCACAAAACCTTTCTCCATCTGCTTATCATCAAGGAATGATCCATCTGATTG 17163891 Query 10323 ATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGA 10382 || || | || || | | | || |||||| | || ||||||||||| || || || Sbjct 17163892 GTCAACGGAGCCTGAAACCATCTGCCCAGCACAAGTAGAGCAGGCACCAGCCCGACATGA 17163951 Query 10383 GTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTA 10427 |||| || || || || | ||||| |||| || | ||||| Sbjct 17163952 GTAGGGTAGCTCCATTCCGGTATCTTCGGCAGAGTCTATGATGTA 17163996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622087130343360