Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq25 165 9e-36 seq4831 122 1e-22 seq8 122 1e-22 seq7 122 1e-22 seq6 122 1e-22 seq3 109 6e-19 seq2 105 8e-18 seq1 104 3e-17 seq4 93.3 5e-14 >seq25 Length=987425 Score = 165 bits (182), Expect = 9e-36 Identities = 167/215 (78%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| |||||||||||||||| | || ||| |||| || Sbjct 697589 CACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCGGCCAAGGTTCGCCCGTCTTC 697530 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || | |||||||||||| | || | || |||||||||| Sbjct 697529 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 697470 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||||| ||| | | | |||||| || ||||| |||| ||| ||||| | Sbjct 697469 GATCTTCGCCTTGA-CGTTGTCGATTGTGTCGGAGGACTCCACCTCCAACGTTATGGTCT 697411 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 | ||||| || ||||| || ||||| ||||| ||| Sbjct 697410 TACCCGTTAGGGTTTTCACGAAGATCTGCATCTTG 697376 >seq4831 Length=230 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||||| ||| || | |||| ||||||||||| |||||||| Sbjct 207 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 148 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 147 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 88 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||||| || || | || ||||| || ||||| || ||||| || Sbjct 87 GTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCAC 28 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 27 GAAGATCTGCAT 16 >seq8 Length=22711823 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||||| ||| || | |||| ||||||||||| |||||||| Sbjct 18948049 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 18948108 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 18948109 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 18948168 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||||| || || | || ||||| || ||||| || ||||| || Sbjct 18948169 GTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCAC 18948228 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 18948229 GAAGATCTGCAT 18948240 >seq7 Length=32205869 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||||| ||| || | |||| ||||||||||| |||||||| Sbjct 5584892 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 5584951 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 5584952 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 5585011 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||||| || || | || ||||| || ||||| || ||||| || Sbjct 5585012 GTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCAC 5585071 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 5585072 GAAGATCTGCAT 5585083 >seq6 Length=21175815 Score = 122 bits (134), Expect = 1e-22 Identities = 164/223 (74%), Gaps = 9/223 (4%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || |||||||| || || ||||| || ||||| |||| | |||||| |||| ||| Sbjct 5316927 ACAAGATGCAAAGTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCG 5316868 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| ||||| || || | ||||||||||| | ||| | | |||||||||| | Sbjct 5316867 AGTTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGG 5316808 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 ||||| ||||| ||| | | | ||||| |||| ||||| || | ||||| || Sbjct 5316807 ATCTTGGCCTTGA-CGTTGTCGATTGTGTCAGAGCTC---TCCACTTCGAGAGTGATCGT 5316752 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACAAA 46603 |||||| || || ||||| || ||||| ||||| ||| ||||| Sbjct 5316751 TTTGCCGGTTAGGGTTTTCACGAAGATCTGCATATTG-ACAAA 5316710 Score = 118 bits (130), Expect = 1e-21 Identities = 170/236 (72%), Gaps = 8/236 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | ||||||||| | || ||||||||||||||||| |||| Sbjct 4450756 TGCCTCCACGGAGACGAAGCACCAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCGG 4450815 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| |||| |||||||| || |||||||| |||| ||||||||||| | | Sbjct 4450816 CCAAGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAG 4450875 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | |||||||| |||||| ||||| ||| | | | ||||| |||| Sbjct 4450876 GGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC--- 4450931 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || || || | || ||||| ||||| || || ||||| || ||||| ||||| || Sbjct 4450932 TCGACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTT 4450987 Score = 118 bits (130), Expect = 1e-21 Identities = 163/223 (73%), Gaps = 9/223 (4%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || |||||||| || || ||||| || ||||| |||| | |||||| |||| ||| Sbjct 5335644 ACAAGATGCAAAGTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCG 5335585 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| ||||| || || | ||||||||||| | ||| | | |||||||||| | Sbjct 5335584 AGTTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGG 5335525 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 ||||| ||||| ||| | | | ||||| |||| ||||| || | ||||| || Sbjct 5335524 ATCTTGGCCTTGA-CGTTGTCGATTGTGTCGGAGCTC---TCCACTTCGAGGGTGATTGT 5335469 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACAAA 46603 ||||| || || ||||| ||||| || ||||| || |||||| Sbjct 5335468 CTTGCCGGTGAGGGTTTTCACAAATATCTGCATCTT-CACAAA 5335427 Score = 116 bits (128), Expect = 4e-21 Identities = 168/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | ||||||||| | || ||||||||||||||||| |||| Sbjct 4450072 TGCCTCCACGGAGACGAAGCACCAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCGG 4450131 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| |||| |||||||| || |||||||| |||| ||||||||||| | | Sbjct 4450132 CCAAGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAG 4450191 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | |||||||| |||||| ||||| ||| | | | ||||| |||| Sbjct 4450192 GGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC--- 4450247 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || ||||| ||||| || || ||||| || ||||| ||||| Sbjct 4450248 TCGACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 4450300 Score = 116 bits (128), Expect = 4e-21 Identities = 168/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | ||||||||| | || ||||||||||||||||| |||| Sbjct 4450300 TGCCTCCACGGAGACGAAGCACCAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCGG 4450359 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| |||| |||||||| || |||||||| |||| ||||||||||| | | Sbjct 4450360 CCAAGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAG 4450419 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | |||||||| |||||| ||||| ||| | | | ||||| |||| Sbjct 4450420 GGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC--- 4450475 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || ||||| ||||| || || ||||| || ||||| ||||| Sbjct 4450476 TCGACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 4450528 Score = 116 bits (128), Expect = 4e-21 Identities = 168/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | ||||||||| | || ||||||||||||||||| |||| Sbjct 4450528 TGCCTCCACGGAGACGAAGCACCAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCGG 4450587 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| |||| |||||||| || |||||||| |||| ||||||||||| | | Sbjct 4450588 CCAAGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGAG 4450647 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | |||||||| |||||| ||||| ||| | | | ||||| |||| Sbjct 4450648 GGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC--- 4450703 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || ||||| ||||| || || ||||| || ||||| ||||| Sbjct 4450704 TCGACTTCGAGAGTAATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 4450756 Score = 105 bits (116), Expect = 8e-18 Identities = 144/197 (73%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || ||||| |||| ||||| || | || |||||||||||||||||||| Sbjct 12931887 CTCCTTTTGAATGTTGTAATCGGCGAGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAA 12931946 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | | ||| |||||| |||||| ||| | ||| Sbjct 12931947 GATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTTGTCCTGGATCTTGGCCTTCA-CGT 12932005 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | |||||| |||| ||||| |||| || || || || || |||| ||| | Sbjct 12932006 TGTCGATCGTGTCGGAGCTC---TCCACCTCCAGGGTAATCGTCTTCCCGGTCAACGTCT 12932062 Query 46578 TAACAAAGATTTGCATT 46594 | || ||||| |||||| Sbjct 12932063 TGACGAAGATCTGCATT 12932079 Score = 104 bits (114), Expect = 3e-17 Identities = 165/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | |||||| |||||||| | || ||||| || || ||||| || | Sbjct 4449567 TGCCACCCCTCAGACGCAAAACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCG 4449626 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || || | | || || ||||||||||| ||||| ||||| ||||||||||| | || Sbjct 4449627 CGAGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCG 4449686 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | ||||||||| |||||| ||||| ||| | | | |||||| |||| Sbjct 4449687 GAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCGGAGCTC--- 4449742 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || || || || ||||| || ||||| || || || ||||| Sbjct 4449743 TCGACTTCGAGGGTAATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 4449795 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | || ||||| | || |||||| || || ||||| |||| Sbjct 5234371 TGCCTCCGCGGAGACGAAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTGTAATCGG 5234312 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| | || ||||||||||| || ||||| || | | ||||||||| | | Sbjct 5234311 CCAAGGTGCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGGG 5234252 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | ||||||||| |||||| ||||| ||| | | | ||||| |||| Sbjct 5234251 GGATTCCCTCCTTGTCTTGAATCTTCGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC--- 5234196 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || || |||||||| ||||| ||||| || ||||| ||||| Sbjct 5234195 TCGACTTCGAGAGTAATAGTTTTGCCAGTCAGGGTTTTCACGAAGATCTGCAT 5234143 Score = 93.3 bits (102), Expect = 5e-14 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || | ||||||||||||||| | || |||||| || || ||||| || | Sbjct 5317173 CCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGCA 5317114 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | || || |||||||| || || || |||| ||||||||| || | || Sbjct 5317113 AGCGTCCTTCCATCCTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGG 5317054 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | || || ||| ||| || ||||| ||| | | | ||||| |||| || Sbjct 5317053 ATCCCTTCTTTATCCTGGATTTTTGCCTTGA-CGTTGTCAATGGTGTCAGAGCTC---TC 5316998 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || |||| ||||| || || |||||||| ||||| || ||||| |||||| Sbjct 5316997 GACTTCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCATT 5316946 Score = 93.3 bits (102), Expect = 5e-14 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || | ||||||||||||||| | || |||||| || || ||||| || | Sbjct 5335890 CCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGCA 5335831 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | || || |||||||| || || || |||| ||||||||| || | || Sbjct 5335830 AGCGTCCTTCCATCCTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGG 5335771 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | || || ||| ||| || ||||| ||| | | | ||||| |||| || Sbjct 5335770 ATCCCTTCTTTATCCTGGATTTTTGCCTTGA-CGTTGTCAATGGTGTCAGAGCTC---TC 5335715 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || |||| ||||| || || |||||||| ||||| || ||||| |||||| Sbjct 5335714 GACTTCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCATT 5335663 Score = 91.5 bits (100), Expect = 2e-13 Identities = 167/241 (69%), Gaps = 8/241 (3%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | || ||||| | || |||||| ||||| ||||| |||| Sbjct 5234143 TGCCTCCGCGGAGACGAAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCGG 5234084 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| |||| ||||||||||| || || || || | | ||||||||| | || Sbjct 5234083 CCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCG 5234024 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | ||||||||| |||||| ||| | ||| | | | ||||| |||| Sbjct 5234023 GAATTCCCTCCTTGTCTTGGATCTTGGCCTTTA-CGTTGTCGATGGTGTCCGAGCTC--- 5233968 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600 || || || | || || ||||| || |||| ||||| || ||||| ||||| | | || Sbjct 5233967 TCGACTTCGAGAGTAATAGTTTTTCCGGTCAAGGTTTTCACGAAGATCTGCATATCGAAC 5233908 Query 46601 A 46601 | Sbjct 5233907 A 5233907 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || |||||||| || || |||||||| ||||| |||| | || || |||| ||| Sbjct 5265383 ACAAGATGCAAGGTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCG 5265324 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| || ||||| |||| | ||||||||||| || | | ||||||||| | Sbjct 5265323 AGTTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGG 5265264 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| ||| | | | | |||||| |||| || || || | || || || Sbjct 5265263 ATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTC---TCGACCTCGAGGGTAATCGTC 5265207 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || ||||| ||||| || ||||| ||||| Sbjct 5265206 TTCCCGGTCAGGGTTTTGACGAAGATCTGCAT 5265175 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || |||||||| || || |||||||| ||||| |||| | ||||| |||| || Sbjct 5327672 ACAAGATGCAAGGTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTGCGGCCGTCTTCC 5327613 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | ||||| |||||||| |||| | ||||||||||| || | | ||||||||| | Sbjct 5327612 AATTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGG 5327553 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| ||| | | | | |||||| |||| || || || | || || || Sbjct 5327552 ATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTC---TCGACCTCGAGGGTAATCGTC 5327496 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || ||||| || ||||| ||||| Sbjct 5327495 TTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 5327464 Score = 86.0 bits (94), Expect = 7e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | |||||||| || || | || ||||| ||||| || || |||| Sbjct 12932080 CCTCCCCTCAGGCGCAACACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGCC 12932139 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| |||| || ||||||||||||||||| || | | ||||||||| | || Sbjct 12932140 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGG 12932199 Query 46487 ACGCTCTCCTTGTCCATGATCTTCT 46511 | | ||||||||| |||||||| Sbjct 12932200 ATCCCTTCCTTGTCCTGGATCTTCT 12932224 Score = 82.4 bits (90), Expect = 9e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||| || | | ||||| |||| || || |||||||| || || Sbjct 5234562 CTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAA 5234503 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| | ||||||||| | || | | ||||||||| |||||| ||| | | Sbjct 5234502 GATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGAATCTTCGCCTTAACGTT 5234443 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | |||||| |||| || || || | || || || || || || || ||||| Sbjct 5234442 ATCGATCGTGTCTGAGCTC---TCAACCTCGAGGGTTATCGTCTTCCCGGTTAGGGTTTT 5234386 Query 46579 AACAAAGATTTGCAT 46593 |||||||| ||||| Sbjct 5234385 GACAAAGATCTGCAT 5234371 >seq3 Length=28715784 Score = 109 bits (120), Expect = 6e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| | | | |||||| |||| ||||||||||| |||||||| Sbjct 25365224 CTCCTTCTGGATGTTGTAAACCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAA 25365283 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | | ||||||||| |||||| ||||| | Sbjct 25365284 GATCAGCCGCTGCTGGTCTGGTGGAATCCCTTCCTTGTCCTGGATCTTAGCCTTGACATT 25365343 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | |||| |||| ||||| || | |||||||| ||||| ||| ||||| Sbjct 25365344 GTCGATCATGTCGGAGCTC---TCCACCTCGAGAGTGATGGTCTTGCCGATCAAAGTTTT 25365400 Query 46579 AACAAAGATTTGCAT 46593 |||||||| ||||| Sbjct 25365401 CACAAAGATCTGCAT 25365415 >seq2 Length=30838379 Score = 105 bits (116), Expect = 8e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || | |||||| |||| || |||||||| |||||||| Sbjct 853290 CTCCTTCTGGATGTTGTAATCCACCAAGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAA 853349 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | | ||||||||| |||||| || || | Sbjct 853350 GATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTAGCCTCGACATT 853409 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | |||||| |||| ||||| || | || ||||| ||||| |||| ||||| Sbjct 853410 GTCGATCGTGTCGAAGCTC---TCCACCTCGAGAGTAATGGTCTTGCCGGTCAAAGTTTT 853466 Query 46579 AACAAAGATTTGCAT 46593 |||||||| ||||| Sbjct 853467 CACAAAGATCTGCAT 853481 >seq1 Length=28801852 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || | | ||||||||||| || |||||||| |||||||| Sbjct 25126025 CTCCTTCTGGATGTTGTAATCTGCCAAGGTGCGCTCGTCCTCAAGCTGCTTTCCGGCGAA 25125966 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCA-CGCTCTCCTTGTCCATGATCTTCTTCTTGAGCG 46520 |||| ||||||||||| | || | | || || |||||| |||||| ||||| Sbjct 25125965 GATCAGCCGCTGCTGGTCCGGTGGAATCTCT-TCGTTGTCCTGGATCTTAGCCTTGACAT 25125907 Query 46521 TCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | |||| | |||| ||||| | | |||||||| ||||| |||| |||| Sbjct 25125906 TGTTGATCGTGGCGAAGCTC---TCCACCTTGAGAGTGATGGTCTTGCCGGTCAAAGTTT 25125850 Query 46578 TAACAAAGATTTGCAT 46593 | |||||||| ||||| Sbjct 25125849 TCACAAAGATCTGCAT 25125834 >seq4 Length=19951838 Score = 93.3 bits (102), Expect = 5e-14 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| || ||| |||||| |||||||||||||| | | ||| ||| | || || Sbjct 7826658 ACAAGATGTAAAGTAGACTCCTTCTGGATATTGTAGTCAGCCAAAGTACGCCCATCCTCC 7826717 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| ||||| || ||||| | |||||| || | || | | ||||||||| | Sbjct 7826718 AGCTGCTTCCCGGCAAAAATCAACCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCCTGG 7826777 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 || || ||| | | | | ||||| ||| || || |||| || |||||| Sbjct 7826778 ATTTTAGCCTTCACATTATCAATGGTGTCTGAACTC---TCAACCTCCAGGGTAATGGTT 7826834 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || ||||||| || || || || || |||||| Sbjct 7826835 TTTCCCGTCAATGTCTTCACGAAAATCTGCATT 7826867 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/198 (72%), Gaps = 9/198 (5%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCT-GCTTGCCGGCGA 46460 ||||||||| |||||||| |||| | |||| | |||| || | | || ||| ||||| Sbjct 3588220 CTCCTTTTGAATATTGTAATCGGCTTGAGTCCAGCCGTCCTCAAAATTGCCTGCGGGCGA 3588161 Query 46461 ATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCG 46520 | || | | ||||||| | | ||| | | |||||||||| |||||| |||| | || Sbjct 3588160 AGATGAGCCTCTGCTGGCCTGGCGGAAGCCCCTCCTTGTCCTGAATCTTCGTCTTCA-CG 3588102 Query 46521 TCGCC-ACCGTGTCG---CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 | | | | | ||||| ||| ||||| || | ||||||||||| || ||| ||| Sbjct 3588101 TTGTCGATCATGTCGGAGCTC---TCCACCTCTAAAGTGATGGTTTTTCCGGTCGACGTC 3588045 Query 46577 TTAACAAAGATTTGCATT 46594 || || ||||| |||||| Sbjct 3588044 TTGACGAAGATCTGCATT 3588027 Score = 89.7 bits (98), Expect = 6e-13 Identities = 150/216 (69%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 |||||||| ||||| ||| ||||| || || ||||| || | || || | | | || Sbjct 7826882 CAACACCAAATGCAGTGTGGATTCCTTCTGAATGTTGTAATCTGCAAGGGTCCTCCCATC 7826941 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || ||||||||||| || || ||||| | ||||||||| | || | || |||||| || Sbjct 7826942 TTCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGAATGCCCTCCTTATC 7827001 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA---TTCCACATCCACCGTGAT 46557 |||||| ||| | | | | ||||| ||| || || |||| ||||| Sbjct 7827002 TTGGATCTTGGCCTTCACATTATCAATAGTGTC---CGAACTCTCTACCTCCAGAGTGAT 7827058 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || ||||| |||||||| Sbjct 7827059 TGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 7827094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565204174814880