Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq4844 623 1e-173 seq2 300 2e-76 seq3 246 4e-60 seq1 163 3e-35 seq20 152 6e-32 seq8 82.4 9e-11 >seq4844 Length=160129 Score = 623 bits (690), Expect = 1e-173 Identities = 740/998 (74%), Gaps = 4/998 (0%) Strand=Plus/Minus Query 179739 TGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 179798 |||| | |||||| | ||| |||| || | |||||||| || | |||||||| Sbjct 1532 TGGGGTCGCTTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTT 1473 Query 179799 GGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCAT 179857 || ||| ||||||| || ||| | ||| | |||||| |||| || || |||||||||| Sbjct 1472 GGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCAT 1414 Query 179858 CGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTA 179917 |||||||| || || || || || || || |||||||| || |||| || || | || Sbjct 1413 TGCTGCTCCTCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTA 1354 Query 179918 TGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTT 179977 ||| ||||| || || |||||||| || ||||| |||| || || ||| | || || Sbjct 1353 TGGAAACAATATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTT 1294 Query 179978 CTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCA 180037 || || || |||||||| ||||| |||| || ||| | || || || ||||||| | Sbjct 1293 TTACCCGATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGA 1234 Query 180038 ACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACT 180097 || | || | |||||| | |||| | | ||||||||||||||||||||||| Sbjct 1233 GCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACT 1174 Query 180098 TTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCTG 180156 | || || |||||||||| || ||||| ||| || |||||||| ||||| || || | Sbjct 1173 TAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAG 1115 Query 180157 CAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGC 180216 |||| ||||||| ||| | |||| || |||||||||| || ||||| | |||| Sbjct 1114 CAGCGACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGC 1055 Query 180217 CCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCC 180276 | || || || ||||| || ||||| | |||| |||| ||||| || ||||||||||||| Sbjct 1054 CTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCC 995 Query 180277 TGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCG 180336 | |||||||| ||||||||| | || ||||| ||||| |||||||| || || ||| | Sbjct 994 TTATGCACCCATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTG 935 Query 180337 CAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCC 180396 | ||||| ||||| |||| |||||| || | | |||||||| |||| ||| || Sbjct 934 CTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTG 875 Query 180397 AGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATG 180456 || ||||||| || |||||||| ||||| || || || ||||| ||||| || | Sbjct 874 CTAATGCAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACG 815 Query 180457 GATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACT 180516 | || || || || |||||||||| ||||| |||||||| || ||||| | || | Sbjct 814 GTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATT 755 Query 180517 TCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCA 180576 |||||||||| || |||||||| || || |||||||||||||| | || | ||||| | Sbjct 754 TCTTCCTGGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTA 695 Query 180577 TGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTG 180636 |||| |||||| | || |||||||| |||||||| || | ||||| |||||||||||| Sbjct 694 TGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTG 635 Query 180637 TGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACG 180696 | | || || ||||| || | | || || ||| || ||||||||||||||||| | Sbjct 634 TAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATG 575 Query 180697 AGCGTAATGCTCACAACTTCCCACTTGACCTGGCAGCT 180734 | ||||||||||| |||||||| || ||||| || ||| Sbjct 574 AACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCT 537 Score = 587 bits (650), Expect = 9e-163 Identities = 755/1036 (73%), Gaps = 9/1036 (1%) Strand=Plus/Plus Query 181408 ACCAAGGAGGGAATGG-----TTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTT 181462 ||||| |||| || || ||||| || | ||||||||| | | ||||| || Sbjct 35814 ACCAAAGAGGAAAAGGATTTATTTGATATTATGGATGACTGGTTACGGAGGGACCGATTC 35873 Query 181463 GTCTTTGTGGGCTGGTCTGGACTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGC 181522 || ||||| || |||||||| ||| | || ||||| ||| ||| | || | ||||| Sbjct 35874 GTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGT 35933 Query 181523 TGGCTCACTGGCACTACTTTTGTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTAC 181582 ||| |||| ||||| || ||||| || || ||||| ||||| ||||| || |||||| Sbjct 35934 TGGTTCACAGGCACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTAT 35993 Query 181583 CTTGAGGG-TGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCA 181641 | || || ||| || ||| | || || || || || || |||||| | | | | || Sbjct 35994 TTGGAAGGCTGC-AACTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCA 36052 Query 181642 TTCTCTTCTTCTACTTTGGGGTCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACT 181701 |||| | | |||| |||||||||||||| || || ||||| |||||| ||| | Sbjct 36053 TTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATT 36112 Query 181702 TGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCT 181761 || || || ||| ||||||| || || ||||| || |||| || || ||||| ||| | Sbjct 36113 AGGCGGTCTTTGGACTTTTGTTGCTCTACACGGTGCTTTCGGACTAATAGGTTTCATGTT 36172 Query 181762 CAGGCAATTTGAACTTGCTCG-TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTT 181820 | ||||||||||||||||| ||| || | | ||||| || ||||| || || || | Sbjct 36173 ACGTCAATTTGAACTTGCTCGCTCTGTTCA-ATTGCGACCTTATAATGCAATAGCATTCT 36231 Query 181821 CCGGTCCTATTGCTGTATTCGTCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTT 181880 | | ||| |||||||| || || |||||||| || || ||||| || || || || ||| Sbjct 36232 CTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTT 36291 Query 181881 GGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGG 181940 ||||||||||||| ||||| ||||| |||||||| || || ||| | || || |||| | Sbjct 36292 GGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAG 36351 Query 181941 GCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTG 182000 | |||||||||||||| | || ||||| ||||||||||| ||||| ||| | |||| | Sbjct 36352 GGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCG 36411 Query 182001 GCGCATTACTCTCTGCAATTCACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTG 182060 || | || | ||| ||||| || | ||||| || |||||| | | | |||| |||| Sbjct 36412 CTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTG 36471 Query 182061 ACCAAGCAAATACTTTCAAAGCATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGG 182120 | ||||| || ||| || || | |||| |||| |||||||||||||| |||| Sbjct 36472 ATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGG 36531 Query 182121 TTACAGCGAACCGCTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGT 182180 | || || |||||||| |||||||| ||||| || |||| ||| |||||| | |||| Sbjct 36532 TCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGT 36591 Query 182181 TGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTA 182240 | |||||||||||| | ||||| || || | ||| | |||| ||| | | || | Sbjct 36592 TACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAG 36651 Query 182241 TTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAG 182300 | || || || || ||||| |||||||||||||| || ||||| |||||| | ||| | | Sbjct 36652 TCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGG 36711 Query 182301 AAGACCCAGAGTTCGAGACGTTCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTG 182360 |||| || || || ||||| ||||||||||| || ||||| || || || ||| | |||| Sbjct 36712 AAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTG 36771 Query 182361 CATGGTTAGCACCAGTCGATCAACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTAC 182420 | ||| | || | ||||| || ||||| ||| || | ||||||||||| || ||| Sbjct 36772 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 36831 Query 182421 CCAGAGGTAACGCACT 182436 || | || ||||| || Sbjct 36832 CCCGTGGAAACGCTCT 36847 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 113316 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 113257 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 113256 CCTACTTGGGGAG 113244 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 134558 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 134617 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 134618 CCTACTTGGGGAG 134630 >seq2 Length=30838379 Score = 300 bits (332), Expect = 2e-76 Identities = 401/555 (72%), Gaps = 2/555 (0%) Strand=Plus/Minus Query 179775 AACCGCCTCTATGTCGGTTGGTTCGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACT 179834 |||||||| || | |||||||| || ||| ||||||| || ||| | ||| | |||||| Sbjct 6214840 AACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 6214781 Query 179835 ATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGA 179893 |||| || || |||||||||| | |||||| || || || || || || || ||||| Sbjct 6214780 -TCTGTATTTATTATCGCCTTCATTGTTGCTCCTCCAGTAGATATTGACGGTATTCGTGA 6214722 Query 179894 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTC 179953 || || ||| || || | ||||| ||||| || || |||||||| || ||||| | Sbjct 6214721 ACTTGTTTCTGAATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTAC 6214662 Query 179954 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTG 180013 ||| || || ||| | || || || || || |||||||| ||||| |||| || || Sbjct 6214661 TTCTGCAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATG 6214602 Query 180014 GCTGTATAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGC 180073 | | || || || ||||||| | || | || | |||||| | |||| | | Sbjct 6214601 GTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 6214542 Query 180074 CTACATGGGTCGTGAGTGGGAACTTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGCGT 180133 |||||||||||||||||||||||| || || ||||||||| || ||||| || Sbjct 6214541 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTATGGGTATGCATCCTTGGATTGTTGT 6214482 Query 180134 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCA 180193 |||||||| |||| || || ||||| || |||| ||| | |||| || | ||||| Sbjct 6214481 TGCATATTCAGCTCTTGTTGCAGCAGCGACTACTGTTTTCTTGATCTACCCAATTGGTCA 6214422 Query 180194 AGGTTCATTCTCTGACGCAATGCCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGT 180253 ||| || ||||| | ||||| || || || ||||| || ||||||| |||| |||| Sbjct 6214421 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 6214362 Query 180254 TTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGT 180313 || | || |||||||||||||| |||||||| ||||||||| | || |||| |||| Sbjct 6214361 ATTATAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCATAGCTTGTGT 6214302 Query 180314 CTTCGGCGGTTCACT 180328 || ||||| || || Sbjct 6214301 ATTTGGCGGCTCCCT 6214287 >seq3 Length=28715784 Score = 246 bits (272), Expect = 4e-60 Identities = 371/533 (70%), Gaps = 36/533 (7%) Strand=Plus/Minus Query 181940 GGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGT 181999 || |||||||||||||| | || ||||| ||||||||||| ||||| ||| | |||| Sbjct 8270068 GGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGC 8270009 Query 182000 GGCGCATTACTCTCTGCAATTCACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGT 182059 | || | || | ||| ||||| || | ||||| || |||||| | | | |||| ||| Sbjct 8270008 GCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGT 8269949 Query 182060 GACCAAGCAAATACTTT--------------CAAAGCA-------------TTC---GAT 182089 || ||||| || || ||| ||| ||| | | Sbjct 8269948 GATGGTGCAAACACATTACGTGTTTTTAACCCAACGCAAGCCGAAAACACATTCCGTGCT 8269889 Query 182090 T------CAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGTCT 182143 | |||| |||| |||||||||||||| ||||| || || |||||||| |||||| Sbjct 8269888 TTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTCT 8269829 Query 182144 CAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTT 182203 || ||||| || |||| ||| |||||| | ||||| |||||||||||| | ||||| Sbjct 8269828 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 8269769 Query 182204 CCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGT 182263 || || | ||| | |||| ||| | | || | | || || || | ||||| ||| Sbjct 8269768 CCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCAAAACCTACGT 8269709 Query 182264 GCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGTTC 182323 ||||||||||| | |||||||||||| | ||| | ||||| || || || ||||| ||| Sbjct 8269708 GCTTATGACTTCATTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTTTC 8269649 Query 182324 TACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATCAA 182383 |||||||| || ||||| || || || ||| | ||||| ||| | || | ||||| Sbjct 8269648 TACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAG 8269589 Query 182384 CCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436 || ||||| ||| || | ||||||||||| || ||||| | || ||||| || Sbjct 8269588 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 8269536 Score = 118 bits (130), Expect = 1e-21 Identities = 140/187 (75%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 171903 TATCTTCTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGT 171962 ||| |||| || || || || || || || ||||| |||||||| ||| | || ||| Sbjct 4033391 TATATTCTTGATGCAGCTGAAGATGCTGGAATTGATCTCCCATATTCATGCAGGGCTGGT 4033332 Query 171963 GCCTGTTCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGA-GCAATC 172021 | || || | |||||||| ||| ||| |||| || || |||||||| | || | Sbjct 4033331 TCTTGCTCTACTTGTGCTGGGAAAGTTGTCTCAGGTAGTGTTGACCAGTCAGATGGAAGC 4033272 Query 172022 TTTCCTTGATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCTAC 172081 |||| |||| ||||||||||| || ||||| | ||||| || ||||||||||||||||| Sbjct 4033271 TTTC-TTGAGGATGATCAAATAGATGCAGGTTATGTTCTCACTTGTGTTGCTTATCCTAC 4033213 Query 172082 AAGCGAT 172088 ||| ||| Sbjct 4033212 AAGTGAT 4033206 Score = 116 bits (128), Expect = 5e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171907 TTCTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGTGCCT 171966 |||| || ||||| || ||||| ||| ||||| ||| || || ||| | || || || | Sbjct 4029981 TTCTTGATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGGGGCTT 4029922 Query 171967 GTTCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCTTTCC 172026 | || |||| |||| ||| ||| | ||| || || || ||||| |||||| || | Sbjct 4029921 GCTCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTC 4029862 Query 172027 TTGATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCTACAAGCG 172086 | |||||||||||||| | | ||| || ||||| || |||| ||||||||| ||||| | Sbjct 4029861 TGGATGATGATCAAATTGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTG 4029802 Query 172087 AT 172088 || Sbjct 4029801 AT 4029800 >seq1 Length=28801852 Score = 163 bits (180), Expect = 3e-35 Identities = 198/270 (73%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 182167 CAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGGACAAG 182226 |||||| | ||||| ||||| |||||| | ||||| || || | ||| | |||| || Sbjct 21789383 CAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAG 21789324 Query 182227 TTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGA 182286 | | | || | | || || || || ||||| |||||||||||||| || ||||| || Sbjct 21789323 TGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGA 21789264 Query 182287 AATCAGAGCATCAGAAGACCCAGAGTTCGAGACGTTCTACACAAAGAACATTCTCTTGAA 182346 |||| | ||| | ||||| || || || ||||| ||||||||||| || ||||| || || Sbjct 21789263 AATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAA 21789204 Query 182347 TGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATCAACCACATGAGAACTTTGTGTTCCC 182406 || ||| | ||||| ||| | || | ||||| || ||||| ||| || | ||||| Sbjct 21789203 CGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCC 21789144 Query 182407 TGAGGAAGTATTACCCAGAGGTAACGCACT 182436 |||||| || ||||| | || ||||| || Sbjct 21789143 TGAGGAGGTTCTACCCCGTGGAAACGCTCT 21789114 Score = 163 bits (180), Expect = 3e-35 Identities = 198/270 (73%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 182167 CAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGGACAAG 182226 |||||| | ||||| ||||| |||||| | ||||| || || | ||| | |||| || Sbjct 21790570 CAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAG 21790511 Query 182227 TTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGA 182286 | | | || | | || || || || ||||| |||||||||||||| || ||||| || Sbjct 21790510 TGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGA 21790451 Query 182287 AATCAGAGCATCAGAAGACCCAGAGTTCGAGACGTTCTACACAAAGAACATTCTCTTGAA 182346 |||| | ||| | ||||| || || || ||||| ||||||||||| || ||||| || || Sbjct 21790450 AATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAA 21790391 Query 182347 TGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATCAACCACATGAGAACTTTGTGTTCCC 182406 || ||| | ||||| ||| | || | ||||| || ||||| ||| || | ||||| Sbjct 21790390 CGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCC 21790331 Query 182407 TGAGGAAGTATTACCCAGAGGTAACGCACT 182436 |||||| || ||||| | || ||||| || Sbjct 21790330 TGAGGAGGTTCTACCCCGTGGAAACGCTCT 21790301 >seq20 Length=1106287 Score = 152 bits (168), Expect = 6e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 180548 CTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAA 180607 |||||||||||| | || | ||||| ||||| |||||| | || |||||||| ||||| Sbjct 251040 CTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAA 250981 Query 180608 CCAGTCCATCATTGATGGTCAAGGTCGTGTGCTCAACACTTGGGCAGACGTACTCAACCG 180667 ||| || | ||||| ||||||||||||| | || || ||||| || | | || || Sbjct 250980 CCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCG 250921 Query 180668 CGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCT 180727 ||| || ||||||||||||||||| || ||||||||||| |||||||| || ||||| Sbjct 250920 TGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCT 250861 Query 180728 GGCAGCTGCTGAGTCCACTCCTGT 180751 || ||| ||| || || |||| Sbjct 250860 AGCTGCTATTGAAGCCCCTGCTGT 250837 >seq8 Length=22711823 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 181878 GTTGGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCC 181937 |||| ||||||| ||| |||| ||||| | | |||| || || ||| | || || ||| Sbjct 5468307 GTTGATTCTTTGAGCCTCGTTTTGGTGTAGTGACGATATTTCGGTTCATCCTTTTTTTCC 5468366 Query 181938 AGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGTGTTGCTGGT 181990 | || | | |||| | ||| | |||||||| ||||||||||| ||||||||| Sbjct 5468367 AAGGGTCTTATAAGTAGACATTAAATCCCTTTCATATGATGGGAGTTGCTGGT 5468419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610359840473760