Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4844 518 4e-142 seq2 251 8e-62 seq3 165 1e-35 seq20 123 3e-23 seq1 118 1e-21 seq4 82.4 9e-11 >seq4844 Length=160129 Score = 518 bits (574), Expect = 4e-142 Identities = 707/987 (72%), Gaps = 0/987 (0%) Strand=Plus/Minus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 ||||| | ||| |||| ||| | ||| | |||| |||||||||| ||||| | Sbjct 1523 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 1464 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| ||| | || ||| | | || || | || |||||||| || ||| Sbjct 1463 ATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCT 1404 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| ||||| || | ||||| ||| | || ||| | | ||||| ||||| Sbjct 1403 CCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAAT 1344 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || || |||||||| || |||| | || || |||||| | || || ||||| || Sbjct 1343 ATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGATA 1284 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119 |||||||| ||| |||| ||||||||||| |||||||| ||||||||| || | | | Sbjct 1283 TGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 1224 Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179 | |||||| | | ||| | | |||||||| | |||||||||| | | | Sbjct 1223 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1164 Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239 | |||||| | || ||||| ||| ||||||||||| ||||| ||||||| |||| Sbjct 1163 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGACTGCT 1104 Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299 || ||| | | || ||| ||||||| || || |||||||||||||| ||||| ||| Sbjct 1103 GTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 1044 Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359 || ||||| ||||| || ||| | || ||||| || ||||| ||||| || ||||| || Sbjct 1043 TCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 984 Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419 ||||||||| ||| ||||| || | || || || || ||||| || ||||| ||| Sbjct 983 TTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 924 Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479 || || || || ||| | | ||||| || || || ||| ||||| || || Sbjct 923 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGCAGGT 864 Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539 |||| ||||| ||||| |||||||| || || || ||||| || |||||||| ||||| Sbjct 863 TACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGC 804 Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599 || | |||||||| |||||| ||||||||| || | | | || |||||||| || Sbjct 803 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCT 744 Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659 | || ||||| ||| || | ||||| || || | ||||| | || ||||| |||||| Sbjct 743 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAAC 684 Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719 | || |||||||| ||||||||||| || || ||| | | ||| | || ||| Sbjct 683 TTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC 624 Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCA 172779 |||| ||| || |||| | || ||||| ||||||||||||||||||||| | ||||| Sbjct 623 TGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 564 Query 172780 CACAACTTCCCATTAGACCTTGCTTCT 172806 || |||||||| ||||||| ||| || Sbjct 563 CATAACTTCCCTCTAGACCTAGCTGCT 537 Score = 363 bits (402), Expect = 2e-95 Identities = 702/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Plus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| || | || ||||||||| ||| || || ||||| || | || |||||||| Sbjct 35835 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 35894 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 || || || | |||||||| || | || | || ||||||||| ||| || ||||| Sbjct 35895 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTT 35954 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || ||||||||||| ||||| | || ||| ||| | ||||| ||||| ||| Sbjct 35955 GTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGCAACTTCTTA 36014 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190 || || ||||| || || |||| | | | ||| | | |||| || ||||| Sbjct 36015 ACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGT 36074 Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250 |||||||||||||| || || |||| ||| | || || || |||| ||||| Sbjct 36075 CCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTT 36134 Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310 || |||| || | || ||||| |||||||||||| | ||||| ||||| | || | Sbjct 36135 GCTCTACACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGC 36194 Query 173311 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 173370 ||| | ||||||| || ||| | |||||||||||| || || || || | Sbjct 36195 TCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTTGTT 36254 Query 173371 AGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGT 173430 | || | || || |||||||| ||| |||||||||| || ||| || ||| Sbjct 36255 TCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 36314 Query 173431 GTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 173490 || || || || ||||| | ||| | || | ||||| || || || |||||||| Sbjct 36315 GTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 36374 Query 173491 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCAT 173550 || ||||| |||||||| ||||| || || | || | || | ||||||||||||||| Sbjct 36375 CCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGTGCCATTCAT 36434 Query 173551 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATT 173610 || || || || | || || || | ||||| || ||| || | Sbjct 36435 GGCGCTACCGTAGAAAATACTTTATTTGAAG------------ATGGTGATGG-----TG 36477 Query 173611 CAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 173670 ||| | || ||| | || ||| | || || || | |||||||| ||| ||| | Sbjct 36478 CAAAC----ACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTC 36533 Query 173671 ACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTA 173730 || || ||| | || ||||| || || ||||| | || ||||| || ||| | | ||| Sbjct 36534 ACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 36593 Query 173731 CACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTA 173790 || ||| | ||||| || ||||| || | ||| | |||| | | || | || Sbjct 36594 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTC 36653 Query 173791 GGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 173850 || || || || ||||| | || || ||||| || || || || || | ||||| ||| Sbjct 36654 GGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 36713 Query 173851 GATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCA 173910 ||||| || || |||||||||||||| || ||||| ||| | || || ||||| | || Sbjct 36714 GATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCT 36773 Query 173911 TGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCA 173970 |||||| | || |||||| || ||||| ||| | |||| || || || || |||| Sbjct 36774 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCC 36833 Query 173971 AGAGGTAACGCACTTTAA 173988 | || ||||| |||||| Sbjct 36834 CGTGGAAACGCTCTTTAA 36851 >seq2 Length=30838379 Score = 251 bits (278), Expect = 8e-62 Identities = 390/557 (70%), Gaps = 0/557 (0%) Strand=Plus/Minus Query 171841 ACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTCATGATCCCATGTTTGCTCACA 171900 ||| | ||| | |||| |||||||||| ||||| | |||||||| ||| | || Sbjct 6214846 ACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 6214787 Query 171901 GCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATC 171960 ||| | | || || | || ||||||| || ||||| || ||||| ||||| || Sbjct 6214786 GCAACTTCTGTATTTATTATCGCCTTCATTGTTGCTCCTCCAGTAGATATTGACGGTATT 6214727 Query 171961 AGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTCTGGTGCAGTTGTT 172020 | |||| ||| | | ||| | | ||||| ||||| || || |||||||| || || Sbjct 6214726 CGTGAACTTGTTTCTGAATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATT 6214667 Query 172021 CCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATCTGGGAAGCAGCAACCGTAGAT 172080 || | || || |||||| | || || ||||| || |||||||| ||| |||| ||| Sbjct 6214666 CCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGAT 6214607 Query 172081 GAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATCGGTATC 172140 |||||||| |||||||| ||||||||| || | | | | |||||| | | ||| | Sbjct 6214606 GAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTA 6214547 Query 172141 TCAGCATACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTATGAGACCATGGATA 172200 | |||||||| | |||||||||| | | | | |||||| || ||||| Sbjct 6214546 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTATGGGTATGCATCCTTGGATT 6214487 Query 172201 TGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTC 172260 ||| ||||||||||| | ||| ||||||| | |||| ||| | | || ||| | Sbjct 6214486 GTTGTTGCATATTCAGCTCTTGTTGCAGCAGCGACTACTGTTTTCTTGATCTACCCAATT 6214427 Query 172261 GGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTTATG 172320 ||||| || || |||||||||||||| ||||| ||||| ||||| |||||||| ||| Sbjct 6214426 GGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATG 6214367 Query 172321 TTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCA 172380 | || || | || ||||| ||||| || ||||| || ||||||||| ||| |||| Sbjct 6214366 ATTGTATTATAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCATAGCT 6214307 Query 172381 GGAATGTTTGGAGGATC 172397 | | ||||| || || Sbjct 6214306 TGTGTATTTGGCGGCTC 6214290 >seq3 Length=28715784 Score = 165 bits (182), Expect = 1e-35 Identities = 352/524 (67%), Gaps = 19/524 (4%) Strand=Plus/Minus Query 173482 ACATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGT 173541 |||||||| || ||||| |||||||| ||||| || || | || | || | |||||| Sbjct 8270053 ACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGT 8269994 Query 173542 GCCATTCATGGTGCAACAGTGCAGAACACATTGTATGAAGA-----------CACATCAC 173590 ||||||||||| || || || | || || || | |||||| || | ||| Sbjct 8269993 GCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAA-CAC 8269935 Query 173591 AATATACTGAAGGTAAG---ATTCAATCCACAA---CTTTCAGAGCATTTGATCCTACAC 173644 | || || ||| | ||| || || | ||| | || ||| | || || | Sbjct 8269934 ATTACG-TGTTTTTAACCCAACGCAAGCCGAAAACACATTCCGTGCTTTTAACCCAACGC 8269876 Query 173645 AGGAAGAAGAAACTTATAGTATGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTA 173704 | | |||||||| ||| ||| | || || ||| | || ||||| || || ||||| Sbjct 8269875 AAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGG 8269816 Query 173705 TCGCATTTTCAAACAAAAGATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTA 173764 | || ||||| || ||| | | ||||| ||| | ||||| || ||||| || | ||| Sbjct 8269815 TTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTT 8269756 Query 173765 TGTGGACATCATCCATAGGTATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTG 173824 | |||| | | || | || || || || | ||||| | || || ||||| Sbjct 8269755 TATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCAAAACCTACGTGCTTATGACTTCA 8269696 Query 173825 TATCTCAAGAGATAAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATA 173884 | || ||||| || | ||||| |||||||| || || |||||||||||||| || |||| Sbjct 8269695 TTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATA 8269636 Query 173885 TACTTCTTAATGAAGGTATGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACT 173944 | ||| | || || ||||| | || |||||| | || |||||| || ||||| ||| Sbjct 8269635 TTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 8269576 Query 173945 TCGTATTTCCAGAAGAAGTGTTACCAAGAGGTAACGCACTTTAA 173988 | |||| || || || || |||| | || ||||| |||||| Sbjct 8269575 TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 8269532 Score = 120 bits (132), Expect = 4e-22 Identities = 213/311 (68%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| || | || ||||||||| ||| || || ||||| || | || |||||||| Sbjct 8270427 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 8270368 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 || || || | |||||||| || | || | || ||||||||| ||| || ||||| Sbjct 8270367 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTT 8270308 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || ||||||||||| ||||| | || ||| ||| | ||||| ||||| ||| Sbjct 8270307 GTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGCAACTTCTTA 8270248 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190 || || ||||| || || ||| | | | ||| | | |||| || ||||| Sbjct 8270247 ACCGCCGCAGTTTCGACTCCTACTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGT 8270188 Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250 | |||||||||||| || || |||| ||| | || || || |||| ||||| Sbjct 8270187 CTTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTT 8270128 Query 173251 GCATTACATGG 173261 || || || || Sbjct 8270127 GCTTTCCACGG 8270117 >seq20 Length=1106287 Score = 123 bits (136), Expect = 3e-23 Identities = 139/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 172621 TGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAAC 172680 ||||| || || | ||||| | || ||||| |||||| | || |||||||| |||||| Sbjct 251039 TGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAAC 250980 Query 172681 CAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGA 172740 ||||| || || ||| | | ||| | || ||| |||| ||| || |||| | Sbjct 250979 CAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCGT 250920 Query 172741 GCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCATTAGACCTT 172800 || ||||| ||||||||||||||||||||| | ||||| || |||||||| ||||||| Sbjct 250919 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTA 250860 Query 172801 GCTTCT 172806 ||| || Sbjct 250859 GCTGCT 250854 >seq1 Length=28801852 Score = 118 bits (130), Expect = 1e-21 Identities = 193/278 (69%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 173711 TTTCAAACAAAAGATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGA 173770 |||| || ||| | | ||||| || | ||||| || ||||| || | ||| | |||| Sbjct 21789387 TTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACCGGTTTATGGA 21789328 Query 173771 CATCATCCATAGGTATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTC 173830 | | || | || || || || || ||||| | || || ||||| || || | Sbjct 21789327 TGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCC 21789268 Query 173831 AAGAGATAAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTC 173890 | || || | ||||| |||||||| || || |||||||||||||| || ||||| ||| Sbjct 21789267 AGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTT 21789208 Query 173891 TTAATGAAGGTATGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTAT 173950 | || || ||||| | || |||||| | || |||||| || ||||| ||| | ||| Sbjct 21789207 TAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAT 21789148 Query 173951 TTCCAGAAGAAGTGTTACCAAGAGGTAACGCACTTTAA 173988 | || || || || |||| | || ||||| |||||| Sbjct 21789147 TCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 21789110 Score = 118 bits (130), Expect = 1e-21 Identities = 193/278 (69%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 173711 TTTCAAACAAAAGATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGA 173770 |||| || ||| | | ||||| || | ||||| || ||||| || | ||| | |||| Sbjct 21790574 TTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACCGGTTTATGGA 21790515 Query 173771 CATCATCCATAGGTATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTC 173830 | | || | || || || || || ||||| | || || ||||| || || | Sbjct 21790514 TGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCC 21790455 Query 173831 AAGAGATAAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTC 173890 | || || | ||||| |||||||| || || |||||||||||||| || ||||| ||| Sbjct 21790454 AGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTT 21790395 Query 173891 TTAATGAAGGTATGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTAT 173950 | || || ||||| | || |||||| | || |||||| || ||||| ||| | ||| Sbjct 21790394 TAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAT 21790335 Query 173951 TTCCAGAAGAAGTGTTACCAAGAGGTAACGCACTTTAA 173988 | || || || || |||| | || ||||| |||||| Sbjct 21790334 TCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 21790297 >seq4 Length=19951838 Score = 82.4 bits (90), Expect = 9e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 159665 AGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATA 159724 |||| ||||| ||| || || || ||| || ||||| || ||||| || | || | Sbjct 18090771 AGGTCGGTCTGACAAGCCCTGGTTACATTGGAGCTGATGTTTGCCATCTCAATCTCCACA 18090830 Query 159725 AGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 | ||||| || ||||| ||||||||||| |||||||| | || ||||||||||| Sbjct 18090831 AAACATTTTGCATTCCGCATGGAGGTGGTGGTCCTGGTATGGGCCCTATTGGTGT 18090885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588015593499840