Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq4844 601 4e-167 seq2 273 2e-68 seq3 201 1e-46 seq20 125 8e-24 seq1 109 6e-19 seq8 100 3e-16 >seq4844 Length=160129 Score = 601 bits (666), Expect = 4e-167 Identities = 730/989 (74%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 162385 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162444 ||||| | ||| ||||| || | |||||||| || | |||||||| || || || Sbjct 1523 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 1464 Query 162445 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 162503 ||||| || ||| | ||| | ||||| ||||| || || |||||||| | |||||||| Sbjct 1463 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1405 Query 162504 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 162563 || || || || ||||| || |||||||| || |||| || || | ||||| ||||| Sbjct 1404 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 1345 Query 162564 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 162623 || || |||||||| || |||| |||| || || ||| | || || || || || Sbjct 1344 TATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGAT 1285 Query 162624 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 162683 |||||||| ||||| ||||||| ||| | || || || ||||||| | || | || Sbjct 1284 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 1225 Query 162684 ATTCCACTTCCTGATCGGCATCTATGCCTACATGGGACGTGAATGGGAACTCTCTTACCG 162743 | |||||| | | || | | |||||||| ||||| |||||||| || ||| Sbjct 1224 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1165 Query 162744 TCTTGGTATGCGTCCATGGATCTGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATCGG 162802 ||| ||||||||||| ||||| ||| || ||||| || || |||||||||||||| | | Sbjct 1164 TCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGACTG 1106 Query 162803 CAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTA 162862 | || ||| || |||| || |||||||||| ||| ||||| | ||||| | || | Sbjct 1105 CTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 1046 Query 162863 TCAGTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATC 162922 || |||||| ||||| | |||| |||| ||||| || ||||||||||| || ||||| | Sbjct 1045 TCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 986 Query 162923 CCTTCCACATGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACG 162982 | ||||||||||| || || || ||||| ||||| || || || |||||||| ||||| | Sbjct 985 CATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 926 Query 162983 GTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATG 163042 |||| ||||| || ||| | || | || || || |||| ||| || || | Sbjct 925 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGCAG 866 Query 163043 GTTACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCG 163102 |||||| ||||||||||| ||||| || || || ||||| || || || ||||| || | Sbjct 865 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTG 806 Query 163103 GTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 163162 | || ||||||||||||||||| |||||||| || ||||| || || |||||||| | Sbjct 805 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGG 746 Query 163163 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCA 163222 |||| |||||||| || || ||||||||||| || | || | || ||||| |||| Sbjct 745 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCA 686 Query 163223 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 163282 || | || |||||||| |||||||| || | ||||| |||| |||||||| | || | Sbjct 685 ACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 626 Query 163283 CCTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATG 163342 ||||||| || || | || ||||| | ||||||||||||||||| || || |||| Sbjct 625 CCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 566 Query 163343 CTCACAACTTCCCACTTGACCTGGCAGCT 163371 |||| |||||||| || ||||| || ||| Sbjct 565 CTCATAACTTCCCTCTAGACCTAGCTGCT 537 Score = 506 bits (560), Expect = 2e-138 Identities = 732/1023 (72%), Gaps = 10/1023 (1%) Strand=Plus/Plus Query 163621 TTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGGTCTGGA 163680 |||||| | ||||||||||| | | | || || ||||| ||| | ||||||||||| Sbjct 35835 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 35894 Query 163681 TTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTTTC 163740 || | || |||| ||| ||| | || | || || ||| | || || ||||| || Sbjct 35895 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTT 35954 Query 163741 GTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTG-AGGGTGCTAATTTTCT 163799 || || || ||||| ||||||||| | || | ||||||| | | ||| ||| || || | Sbjct 35955 GTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGC-AACTTCTT 36013 Query 163800 CACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGG 163858 || || || || || || |||||| | | | | |||||| || || || || |||| Sbjct 36014 AACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCT-TTGTTGTTACTATGGG 36072 Query 163859 GTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTG 163918 ||||||| || || || ||||| |||||| ||| | || || || |||| ||||| Sbjct 36073 GTCCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTG 36132 Query 163919 TGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTC 163978 | || || ||||| || || | || || ||||||||| | || |||||||||||||||| Sbjct 36133 TTGCTCTACACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTC 36192 Query 163979 GC-CTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTC 164037 || ||| || | | |||| || ||||| || || ||||||| ||| |||||||| || Sbjct 36193 GCTCTG-TTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTT 36251 Query 164038 GTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTT 164097 ||| ||| || || || || || || ||||| || |||||||||| || || |||| Sbjct 36252 GTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTT 36311 Query 164098 GGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTG 164157 || || || || || || ||||| || | || | ||||| |||||||| ||||| ||| Sbjct 36312 GGTGTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTG 36371 Query 164158 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATT 164217 |||||||| ||||||||||||||||| ||| || | |||| || |||||| ||| ||| Sbjct 36372 AACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGTGCCATT 36431 Query 164218 CACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTTAAG 164277 || || | || || |||||||| || | ||||||||| || |||||||| || Sbjct 36432 CATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCGT 36491 Query 164278 GCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 164337 || ||| | | || || | ||||| || ||||| |||||||| || |||||||| ||| Sbjct 36492 GCTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGG 36551 Query 164338 TCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTT 164397 || || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| ||| Sbjct 36552 TCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 36611 Query 164398 GTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTT 164457 || || || | ||| |||||| || |||| | | ||||| || || || || Sbjct 36612 GTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTA 36671 Query 164458 CGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACT 164517 |||||||| || || || || || || | ||||| ||||||||||| || |||||| Sbjct 36672 CGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACT 36731 Query 164518 TTCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGAC 164577 ||||| || || || || | || ||||| || | ||||| ||| | || | || Sbjct 36732 TTCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGAT 36791 Query 164578 CAGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTT 164635 |||| || || ||| || | ||||| || || || || || | || || || |||| Sbjct 36792 CAGCCTCATGAAAAC--CTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTT 36849 Query 164636 AAT 164638 ||| Sbjct 36850 AAT 36852 >seq2 Length=30838379 Score = 273 bits (302), Expect = 2e-68 Identities = 395/555 (71%), Gaps = 2/555 (0%) Strand=Plus/Minus Query 162412 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 162471 |||||||| || | |||||||| || || ||||||| || ||| | ||| | ||||| Sbjct 6214840 AACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 6214781 Query 162472 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 162530 ||||| || || |||||||| | | |||||| || || || || ||||| || ||||| Sbjct 6214780 -TCTGTATTTATTATCGCCTTCATTGTTGCTCCTCCAGTAGATATTGACGGTATTCGTGA 6214722 Query 162531 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 162590 || || ||| || || | ||||| ||||| || || |||||||| || |||| | Sbjct 6214721 ACTTGTTTCTGAATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTAC 6214662 Query 162591 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 162650 ||| || || ||| | || || || || || |||||||| ||||| ||||||| || Sbjct 6214661 TTCTGCAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATG 6214602 Query 162651 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTTCCTGATCGGCATCTATGC 162710 | | || || || ||||||| | || | || | |||||| | | || | | Sbjct 6214601 GTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 6214542 Query 162711 CTACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTATGCGTCCATGGATCTGCGT 162770 |||||||| ||||| |||||||| || |||| | ||||||| ||| ||||| || Sbjct 6214541 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTATGGGTATGCATCCTTGGATTGTTGT 6214482 Query 162771 AGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTTCGGTCA 162830 ||||| || || | |||||||||||| | | || ||| || |||| || | ||||| Sbjct 6214481 TGCATATTCAGCTCTTGTTGCAGCAGCGACTACTGTTTTCTTGATCTACCCAATTGGTCA 6214422 Query 162831 AGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATGCTTGT 162890 ||| ||| ||||| | ||||| | || ||| |||||| ||||||| |||| |||| Sbjct 6214421 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 6214362 Query 162891 CTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGT 162950 || | || ||||||||||| || ||||| || ||||||||||| || | || |||| Sbjct 6214361 ATTATAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCATAGCTTGTGT 6214302 Query 162951 CTTCGGTGGTTCACT 162965 || || || || || Sbjct 6214301 ATTTGGCGGCTCCCT 6214287 >seq3 Length=28715784 Score = 201 bits (222), Expect = 1e-46 Identities = 365/541 (67%), Gaps = 40/541 (7%) Strand=Plus/Minus Query 164136 AGGATTTCATAACTGGACTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGG 164195 ||| |||||||| ||||| ||||||||||| ||||||||||||||||| ||| || | || Sbjct 8270069 AGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGG 8270010 Query 164196 CGGAGCATTGCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATGG 164255 || || |||||| ||| ||||| || | || || |||||||| || | ||||||||| Sbjct 8270009 CGCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGG 8269950 Query 164256 AGAACAAGCAAACACCTTT-------------------AAGGCG---------------- 164280 || |||||||| || ||| || Sbjct 8269949 TGATGGTGCAAACACATTACGTGTTTTTAACCCAACGCAAGCCGAAAACACATTCCGTGC 8269890 Query 164281 -TTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 164339 ||| | | || || | ||||| || ||||| |||||||| || |||||||| ||||| Sbjct 8269889 TTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTC 8269830 Query 164340 GCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGT 164399 || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| ||||| Sbjct 8269829 TCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 8269770 Query 164400 GCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCG 164459 || || | ||| |||||| || |||| | | ||||| || | || || || Sbjct 8269769 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCAAAACCTACG 8269710 Query 164460 TGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACTTT 164519 |||||| || || | ||||| || | ||||| ||||||||||| || |||||||| Sbjct 8269709 TGCTTATGACTTCATTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTTT 8269650 Query 164520 CTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGACCA 164579 ||| || || || || | || ||||| || | ||||| ||| | || | || || Sbjct 8269649 CTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 8269590 Query 164580 GC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTTAA 164637 || || || ||| || | ||||| || || || || || | || || || |||||| Sbjct 8269589 GCCTCATGAAAAC--CTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 8269532 Query 164638 T 164638 | Sbjct 8269531 T 8269531 Score = 123 bits (136), Expect = 3e-23 Identities = 222/319 (70%), Gaps = 4/319 (1%) Strand=Plus/Minus Query 163621 TTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGGTCTGGA 163680 |||||| | ||||||||||| | | | || || ||||| ||| | ||||||||||| Sbjct 8270427 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 8270368 Query 163681 TTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTTTC 163740 || | || |||| ||| ||| | || | || || ||| | || || ||||| || Sbjct 8270367 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTT 8270308 Query 163741 GTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTG-AGGGTGCTAATTTTCT 163799 || || || ||||| ||||||||| | || | ||||||| | | ||| ||| || || | Sbjct 8270307 GTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGC-AACTTCTT 8270249 Query 163800 CACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGG 163858 || || || || || || ||| || | | | | |||||| || || || || |||| Sbjct 8270248 AACCGCCGCAGTTTCGACTCCTACTAATAGTTTAGCGCATTCT-TTGTTGTTACTATGGG 8270190 Query 163859 GTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTG 163918 ||| ||| || || || ||||| |||||| ||| | || || || |||| ||||| Sbjct 8270189 GTCTTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTG 8270130 Query 163919 TGGCACTCCACGGAGCCTT 163937 | || ||||||| || || Sbjct 8270129 TTGCTTTCCACGGTGCTTT 8270111 >seq20 Length=1106287 Score = 125 bits (138), Expect = 8e-24 Identities = 125/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 163210 ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGT 163269 || ||||| |||||| | || |||||||| |||||||| || | ||||| |||| ||| Sbjct 251015 ACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGT 250956 Query 163270 CGTGTGTTGAACACCTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATG 163329 ||||| | || |||||||| || || | || ||||| | ||||||||||||||| Sbjct 250955 CGTGTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATG 250896 Query 163330 CACGAGCGCAATGCTCACAACTTCCCACTTGACCTGGCAGCT 163371 || || || |||||||| |||||||| || ||||| || ||| Sbjct 250895 CATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCT 250854 >seq1 Length=28801852 Score = 109 bits (120), Expect = 6e-19 Identities = 200/291 (69%), Gaps = 4/291 (1%) Strand=Plus/Minus Query 164350 GGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATG 164409 || ||||| |||| || || || ||| | |||||||| ||||| ||||| || || | Sbjct 21789397 GGGGTTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACC 21789338 Query 164410 GGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCGTGCTTACGAT 164469 ||| |||||| || |||| | | ||||| || || || || |||||||| || Sbjct 21789337 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGAC 21789278 Query 164470 TTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACTTTCTATACCAAG 164529 || || || || || | ||||| ||||||||||| || ||||||||||| || || Sbjct 21789277 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAA 21789218 Query 164530 AACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGACCAGC--CAGGAG 164587 || || | || ||||| || | ||||| ||| | || | || |||| || || Sbjct 21789217 AATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 21789158 Query 164588 AACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTTAAT 164638 ||| || | ||||| || || || || || | || || || ||||||| Sbjct 21789157 AAC--CTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 21789109 Score = 109 bits (120), Expect = 6e-19 Identities = 200/291 (69%), Gaps = 4/291 (1%) Strand=Plus/Minus Query 164350 GGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATG 164409 || ||||| |||| || || || ||| | |||||||| ||||| ||||| || || | Sbjct 21790584 GGGGTTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACC 21790525 Query 164410 GGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCGTGCTTACGAT 164469 ||| |||||| || |||| | | ||||| || || || || |||||||| || Sbjct 21790524 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGAC 21790465 Query 164470 TTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACTTTCTATACCAAG 164529 || || || || || | ||||| ||||||||||| || ||||||||||| || || Sbjct 21790464 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAA 21790405 Query 164530 AACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGACCAGC--CAGGAG 164587 || || | || ||||| || | ||||| ||| | || | || |||| || || Sbjct 21790404 AATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 21790345 Query 164588 AACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTTAAT 164638 ||| || | ||||| || || || || || | || || || ||||||| Sbjct 21790344 AAC--CTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 21790296 >seq8 Length=22711823 Score = 100 bits (110), Expect = 3e-16 Identities = 134/185 (72%), Gaps = 5/185 (3%) Strand=Plus/Minus Query 164075 GTTGGTTCTTCGCTCCATCTTTTGGAGTGGCAGCAATCTTCAGATTCCTC-TTATTCCTT 164133 ||| |||||| || || |||||| || | ||||| || | ||| || || ||| || Sbjct 6304515 GTTAGTTCTTTGCGCCTAGTTTTGGTGTAGTGGCAATATTACGGTTCATCCTTCTTCTTT 6304456 Query 164134 ----CAAGGATTTCATAACTGGACTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTAT 164189 ||||| | | |||| ||||| ||||||||||| ||||||||||||||||| || | Sbjct 6304455 TTTTCAAGGGTCTTATAAGTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCTGTGT 6304396 Query 164190 ACTAGGCGGAGCATTGCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTGTATGA 164249 | | |||| || |||||| ||||||||| | | || | |||||||| | | ||| Sbjct 6304395 ATTGGGCGCTGCTCTGCTATGTGCTATTCATAGCGCTACTATAGAAAATACTTAATTTGA 6304336 Query 164250 AGATG 164254 |||| Sbjct 6304335 GGATG 6304331 Score = 86.0 bits (94), Expect = 7e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 164075 GTTGGTTCTTCGCTCCATCTTTTGGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTC 164134 |||| ||||| | || |||||| || | | || || | ||| || | || | | Sbjct 5468307 GTTGATTCTTTGAGCCTCGTTTTGGTGTAGTGACGATATTTCGGTTCATCCTTTTTTTCC 5468366 Query 164135 AAGGATTTCATAACTGGACTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAG 164194 |||| | | |||| | ||| || || ||||| ||||||||||||||||||||| || ||| Sbjct 5468367 AAGGGTCTTATAAGTAGACATTAAATCCCTTTCATATGATGGGAGTTGCTGGTGTATTAG 5468426 Query 164195 GCGGAGCATTGCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATG 164254 | | | ||||| ||||||||| || || | |||||||| || | |||||||| Sbjct 5468427 GTGATGTTCAGCTATGTGCTATTCATGGCACTACTATAGAAAATACTTTATTTGAAGATG 5468486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557550238288800