Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3654 118 7e-22 seq4 118 7e-22 seq3240 109 4e-19 seq6 104 2e-17 seq4831 93.3 3e-14 seq8 93.3 3e-14 seq7 93.3 3e-14 seq25 89.7 3e-13 seq4703 84.2 1e-11 seq9 84.2 1e-11 >seq3654 Length=575 Score = 118 bits (130), Expect = 7e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||| ||||||||| ||||||||||| | ||| | | | |||| || Sbjct 516 AACCAAGTGAAGAGTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCATCTTC 457 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| ||||| ||||| || || | ||||| ||| | || | ||||||||||| Sbjct 456 AAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTG 397 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||| || ||| ||| | || | ||| ||||| || | || || ||||| Sbjct 396 AATTTTTGCTTTCACGTTGTCGATGGTGTCAGAACTTTCAACCTCAAGAGTAATTGTTTT 337 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| ||||| || ||||||||||||||||| Sbjct 336 TCCGGTGAGGGTTTTCACAAAGATCTGCAT 307 >seq4 Length=19951838 Score = 118 bits (130), Expect = 7e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||||||||||||||| | |||| | || |||| || Sbjct 7827798 ACCAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCAAGGGTGCGGCCATCCTCA 7827857 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||| || ||||| || || | |||||||||| | || | ||| |||||||| | Sbjct 7827858 AGTTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGA 7827917 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | || || || | ||| || |||||| Sbjct 7827918 ATCTTGGCTTTGACATTGTCAATAGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTTTTT 7827977 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| ||||||||||||||| Sbjct 7827978 CCAGTGAGGGTCTTTACAAAGATCTGCATA 7828007 Score = 118 bits (130), Expect = 7e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||| ||||||||| ||||||||||| | ||| | | | |||| || Sbjct 7832439 AACCAAGTGAAGAGTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCATCTTC 7832498 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| ||||| ||||| || || | ||||| ||| | || | ||||||||||| Sbjct 7832499 AAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTG 7832558 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||| || ||| ||| | || | ||| ||||| || | || || ||||| Sbjct 7832559 AATTTTTGCTTTCACGTTGTCGATGGTGTCAGAACTTTCAACCTCAAGAGTAATTGTTTT 7832618 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| ||||| || ||||||||||||||||| Sbjct 7832619 TCCGGTGAGGGTTTTCACAAAGATCTGCAT 7832648 Score = 118 bits (130), Expect = 7e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||| ||||||||| ||||||||||| | ||| | | | |||| || Sbjct 7861181 AACCAAGTGAAGAGTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCATCTTC 7861240 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| ||||| ||||| || || | ||||| ||| | || | ||||||||||| Sbjct 7861241 AAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTG 7861300 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||| || ||| ||| | || | ||| ||||| || | || || ||||| Sbjct 7861301 AATTTTTGCTTTCACGTTGTCGATGGTGTCAGAACTTTCAACCTCAAGAGTAATTGTTTT 7861360 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| ||||| || ||||||||||||||||| Sbjct 7861361 TCCGGTGAGGGTTTTCACAAAGATCTGCAT 7861390 Score = 113 bits (124), Expect = 3e-20 Identities = 154/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||| ||||||||||| | ||| | || |||| || Sbjct 7828026 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGAGTGCGGCCATCCTCG 7828085 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||| || ||||| || || | |||||||||| | || | ||| ||||| || Sbjct 7828086 AGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGG 7828145 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||| || || |||| || ||| | || || || | ||||||||| Sbjct 7828146 ATCTTGGCTTTTAC--AT--TATCAATGGTGTCAGAGCTTTCGACCTCAAGGGTTATGGT 7828201 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || |||||||||||||||||||| ||||| Sbjct 7828202 CTTGCCGGTGAGAGTCTTCACAAAGATTTGCAT 7828234 Score = 109 bits (120), Expect = 4e-19 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | || || ||||| |||||||| || | || | || |||| || Sbjct 7833122 AACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGCGAGTGTGCGCCCATCCTC 7833181 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||||| || ||||| || || | ||||| ||| | || | ||| |||||||| Sbjct 7833182 AAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTG 7833241 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTC-ACCGGCC---TCAACATCGACGGTTATGG 34947 ||||| |||||| || |||| || | ||| ||||| || | |||||||| Sbjct 7833242 GATCTTAGCTTTGAC--AT--TATCAATGGTATCGGAGCTTTCAACCTCAAGGGTTATGG 7833297 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||||| |||||||||||||||||||| ||||| Sbjct 7833298 TTTTTCCAGTGAGAGTCTTCACAAAGATTTGCAT 7833331 Score = 107 bits (118), Expect = 1e-18 Identities = 153/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || ||| ||||||||||| ||||| | |||| | || |||| || Sbjct 7827570 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGCAAGGGTACGGCCATCTTCT 7827629 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| ||||| || |||| ||||| || | || | ||||||||||| | Sbjct 7827630 AGCTGCTTTCCAGCAAAAATCAGTCTCTGCTGATCAGGAGGGATTCCCTCCTTGTCCTGA 7827689 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| || | ||||| ||| |||||| || | ||| || || Sbjct 7827690 ATCTTAGCCTTGAC--AT--TGTCGATTGTATCAGAACTCTCAACTTCCAAGGTGATAGT 7827745 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || || || || |||||||| |||||||| Sbjct 7827746 TTTACCAGTCAGGGTTTTCACAAATATCTGCAT 7827778 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| || ||| ||||| ||||| ||||| | ||| | ||| |||| || Sbjct 7861638 ACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGTCCATCCTCT 7861697 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||| || ||||| || || | |||||||||| | || | ||| ||||| || | Sbjct 7861698 AGTTGTTTACCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGA 7861757 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || |||||| | || | || | || || || | ||| || || ||| Sbjct 7861758 ATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTCTTT 7861817 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| ||||||||||||||| Sbjct 7861818 CCAGTGAGGGTCTTTACAAAGATCTGCATA 7861847 >seq3240 Length=620 Score = 109 bits (120), Expect = 4e-19 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | || || ||||| |||||||| || | || | || |||| || Sbjct 502 AACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGCGAGTGTGCGCCCATCCTC 443 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||||| || ||||| || || | ||||| ||| | || | ||| |||||||| Sbjct 442 AAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTG 383 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTC-ACCGGCC---TCAACATCGACGGTTATGG 34947 ||||| |||||| || |||| || | ||| ||||| || | |||||||| Sbjct 382 GATCTTAGCTTTGAC--AT--TATCAATGGTATCGGAGCTTTCAACCTCAAGGGTTATGG 327 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||||| |||||||||||||||||||| ||||| Sbjct 326 TTTTTCCAGTGAGAGTCTTCACAAAGATTTGCAT 293 >seq6 Length=21175815 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||||| | |||||||| |||| || ||| ||||||||||| || |||| Sbjct 4449569 CCACCCCTCAGACGCAAAACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCG 4449628 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | | | |||| |||||||| || || || || || | || |||||||| |||| Sbjct 4449629 AGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGA 4449688 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||| |||||||| ||||| |||||| | |||| || | ||| || Sbjct 4449689 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCGACT 4449748 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| ||| || || |||||||| || || || || || |||||||| Sbjct 4449749 TCGAGGGTAATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 4449795 Score = 89.7 bits (98), Expect = 3e-13 Identities = 139/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCA 34847 |||||| |||||||| || || | |||| | || | || || || || || |||||| Sbjct 5316910 TTCTTTTTGAATGTTGTAATCGGCCAAAG--TGCGGCCGTCTTCGAGTTGCTTCCCGGCA 5316853 Query 34848 AATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACG 34907 || || || || |||||||| |||| | ||||||||||| ||||| |||||| Sbjct 5316852 AAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACG 5316793 Query 34908 GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || | ||| | ||| || |||| || || ||||| || || || || ||| Sbjct 5316792 TTGTCGATTGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTC 5316733 Query 34968 ACAAAGATCTGCATATT 34984 || |||||||||||||| Sbjct 5316732 ACGAAGATCTGCATATT 5316716 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/198 (70%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCA 34847 |||||| |||||||| || || | |||| | || | || || || || || |||||| Sbjct 5335627 TTCTTTTTGAATGTTGTAATCGGCCAAAG--TGCGGCCGTCTTCGAGTTGCTTCCCGGCA 5335570 Query 34848 AATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACG 34907 || || || || |||||||| |||| | ||||||||||| ||||| |||||| Sbjct 5335569 AAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACG 5335510 Query 34908 GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || | || | ||| || |||| ||| || || || || ||||| || ||| Sbjct 5335509 TTGTCGATTGTGTCGGAGCTCTCCACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTTTTC 5335450 Query 34968 ACAAAGATCTGCATATTC 34985 ||||| |||||||| ||| Sbjct 5335449 ACAAATATCTGCATCTTC 5335432 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || | | | | || |||| || || || |||||||| || Sbjct 5265137 TCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAG 5265078 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | |||||||||||| ||||| |||||| Sbjct 5265077 ATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 5265018 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || |||| || || ||||| || || || || ||||| Sbjct 5265017 TCGATTGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTCACG 5264958 Query 34971 AAGATCTGCATATT 34984 |||||||||||||| Sbjct 5264957 AAGATCTGCATATT 5264944 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || | | | | || |||| || || || |||||||| || Sbjct 5327426 TCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAG 5327367 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | |||||||||||| ||||| |||||| Sbjct 5327366 ATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 5327307 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || |||| || || ||||| || || || || ||||| Sbjct 5327306 TCGATTGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTCACG 5327247 Query 34971 AAGATCTGCATATT 34984 |||||||||||||| Sbjct 5327246 AAGATCTGCATATT 5327233 Score = 82.4 bits (90), Expect = 5e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||||||||||| | ||| || | ||| | ||| ||| ||||| |||||||| || | Sbjct 12932078 TTCCTCCCCTCAGGCGCAACACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGG 12932137 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 ||| | || | || |||||||| || ||||| || || || | |||||||| | | Sbjct 12932138 CCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGG 12932197 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTG 34900 | | ||| |||||||| |||||||| Sbjct 12932198 GGATCCCTTCCTTGTCCTGGATCTTCTG 12932225 >seq4831 Length=230 Score = 93.3 bits (102), Expect = 3e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || || ||||| ||||| | ||| ||| | || || ||||| |||||||| || Sbjct 206 TCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAG 147 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||||||| ||||| ||||| || Sbjct 146 ATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT 89 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| | || || || | ||||||||| |||||||| || || || Sbjct 88 --TGTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTT 31 Query 34967 CACAAAGATCTGCAT 34981 ||| ||||||||||| Sbjct 30 CACGAAGATCTGCAT 16 >seq8 Length=22711823 Score = 93.3 bits (102), Expect = 3e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || || ||||| ||||| | ||| ||| | || || ||||| |||||||| || Sbjct 18948050 TCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAG 18948109 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||||||| ||||| ||||| || Sbjct 18948110 ATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT 18948167 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| | || || || | ||||||||| |||||||| || || || Sbjct 18948168 --TGTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTT 18948225 Query 34967 CACAAAGATCTGCAT 34981 ||| ||||||||||| Sbjct 18948226 CACGAAGATCTGCAT 18948240 >seq7 Length=32205869 Score = 93.3 bits (102), Expect = 3e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || || ||||| ||||| | ||| ||| | || || ||||| |||||||| || Sbjct 5584893 TCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAG 5584952 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||||||| ||||| ||||| || Sbjct 5584953 ATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT 5585010 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| | || || || | ||||||||| |||||||| || || || Sbjct 5585011 --TGTCGATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTT 5585068 Query 34967 CACAAAGATCTGCAT 34981 ||| ||||||||||| Sbjct 5585069 CACGAAGATCTGCAT 5585083 >seq25 Length=987425 Score = 89.7 bits (98), Expect = 3e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| | | | |||| | || || ||||| || ||||| || Sbjct 697570 TCCTTCTGGATATTGTAGTCGGCCAAGGTTCGCCCGTCTTCGAGCTGCTTGCCGGCGAAG 697511 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| |||||| Sbjct 697510 ATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 697451 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || || | |||||||| || ||||| || || ||||| Sbjct 697450 TCGATTGTGTCGGAGGACTCCACCTCCAACGTTATGGTCTTACCCGTTAGGGTTTTCACG 697391 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 697390 AAGATCTGCATCTT 697377 >seq4703 Length=395 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || | | | | || |||| || || || |||||||| || Sbjct 175 TCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAG 234 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | |||||||||||| ||||| |||||| Sbjct 235 ATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 294 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || |||| || || ||||| || || || || ||||| Sbjct 295 TCGATTGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTCACG 354 Query 34971 AAGATCTGCATATT 34984 |||||||||||||| Sbjct 355 AAGATCTGCATATT 368 >seq9 Length=18450785 Score = 84.2 bits (92), Expect = 1e-11 Identities = 105/143 (73%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 34748 ATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA 34805 ||||| |||||||||| | ||||| |||||||||| ||| || |||||||||||| Sbjct 18316969 ATCATAGTTCCTCCCCTGAGCCTCAGGACCAAGTGAAGTGTTGACTCCTTCTGAATGTTA 18317028 Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865 || || | ||| | || |||| |||| ||||| || ||||| || | || ||||| Sbjct 18317029 TAATCAGCAAGAGTACGGCCATCTTCCAATTGTTTCCCAGCAAAAATCAATCTCTGCTGA 18317088 Query 34866 TCTTGCGGCACCCCCTCCTTGTC 34888 || | || | || |||||||| Sbjct 18317089 TCCGGAGGAATGCCTTCCTTGTC 18317111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324614434849632