Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq4844 600 1e-166 seq2 295 8e-75 seq3 266 4e-66 seq1 163 3e-35 seq8 122 1e-22 seq7 107 2e-18 seq20 91.5 2e-13 >seq4844 Length=160129 Score = 600 bits (664), Expect = 1e-166 Identities = 739/1005 (74%), Gaps = 4/1005 (0%) Strand=Plus/Plus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 ||||||||||| | |||| || || || ||||| ||||||||||| || | || Sbjct 35845 TGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 35904 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 35905 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTTGTAACTTCAT 35964 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCT 179127 |||| |||||||| | || ||||||||| | ||||| ||| ||||| | || || || Sbjct 35965 GGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCA 36023 Query 179128 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 179187 || ||||| |||||| || | | | |||||| | | |||| ||||||||||| | Sbjct 36024 GTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCA 36083 Query 179188 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCAC 179247 || || |||| || ||||| ||| | || || || |||| ||| || ||||| ||| Sbjct 36084 CAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTACAC 36143 Query 179248 GGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGG 179306 ||||| |||| ||||| || |||||| | ||||| |||||||| || || ||| || Sbjct 36144 GGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGCTCTGTTCAA 36203 Query 179307 TATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATT 179366 | | || ||||| ||||| || || || ||| ||| ||||| || || ||| |||||| Sbjct 36204 T-TGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATT 36262 Query 179367 TCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGC 179426 || || || ||||| || || || |||||||||||||||| |||||||| ||||| Sbjct 36263 CCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGC 36322 Query 179427 GATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCA 179486 ||| ||| ||||| | ||||| || ||||| || || || |||||| | ||||||||||| Sbjct 36323 GATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCA 36382 Query 179487 CATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAAC 179546 |||||||||||||| ||| | |||| | ||||||||| | ||| |||||||| | || Sbjct 36383 TATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGTGCCATTCATGGCGCTAC 36442 Query 179547 TGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTC 179606 ||||| ||||| || | ||||||||| || ||||||||||| || || || | Sbjct 36443 CGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCC 36502 Query 179607 TACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTT 179666 ||||||| || || |||||||| ||||| || || ||||| |||||||| || ||||| Sbjct 36503 AACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTT 36562 Query 179667 CGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCAT 179726 |||||| | ||| |||||| |||||||| || ||||||| | | ||||| || || | Sbjct 36563 TGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAAC 36622 Query 179727 GGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGA 179786 ||| | ||| | | || |||| | | || ||||| || || || ||||||||||| Sbjct 36623 CGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGA 36682 Query 179787 TTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAA 179846 || || || || ||| | ||||| ||||||||||| || ||||| ||||| ||||| Sbjct 36683 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAA 36742 Query 179847 GAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGA 179906 || |||||| | || || || | ||||||||| |||| || ||||| || ||||| Sbjct 36743 AAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 36802 Query 179907 AAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 |||| | || ||||| || || || ||||| |||| ||||| || Sbjct 36803 AAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 36847 Score = 567 bits (628), Expect = 9e-157 Identities = 723/989 (73%), Gaps = 5/989 (1%) Strand=Plus/Minus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 ||||| | ||| ||||| || | |||||||| || | |||||||| || || || Sbjct 1523 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 1464 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCC 177676 ||||| || ||| | ||| | |||||| |||| || || |||||||| | |||||||| Sbjct 1463 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1405 Query 177677 CCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 177736 || || || || ||||| || |||||||| || |||| || || | ||||| ||||| Sbjct 1404 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 1345 Query 177737 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 177796 || || |||||||| || | || |||| || || ||| | || || || || || Sbjct 1344 TATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGAT 1285 Query 177797 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 177856 |||||||| ||||| ||||||| ||| | || || || ||||||| | || | || Sbjct 1284 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 1225 Query 177857 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCG 177916 | |||||| | | || | | || ||||| ||||||||||||||| | ||| Sbjct 1224 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1165 Query 177917 TCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGC 177976 ||| |||||||| || ||||| ||||||||| || || |||||||||||||| | || Sbjct 1164 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGACTGC 1105 Query 177977 AGTCTTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTA 178035 || ||||| | |||| || |||||||||| || || |||| ||||||||| || | Sbjct 1104 TGT-TTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 1046 Query 178036 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACC 178095 ||||||||||||| || | |||| |||||||||| || || ||||| ||||||||||||| Sbjct 1045 TCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 986 Query 178096 CGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 178155 | ||||||||| | || || ||||| |||||||| || || || ||| ||||||||||| Sbjct 985 CATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 926 Query 178156 GAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATG 178215 | | || || ||| | || | || || ||||||| ||| || || | Sbjct 925 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGCAG 866 Query 178216 GTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCG 178275 |||||| ||||| ||||| |||||||| ||||| ||||| || || || ||||| || | Sbjct 865 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTG 806 Query 178276 GTCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCG 178335 | || ||||||||||||||||| |||||||| || ||||| | || |||||||| | Sbjct 805 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGG 746 Query 178336 CAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTA 178395 | || ||||||||||| || ||||||||||| || | ||| | ||| ||||| || | Sbjct 745 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCA 686 Query 178396 ACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACA 178455 || | ||||| ||||| |||||||| || | | || | ||||| ||||| | || | Sbjct 685 ACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 626 Query 178456 CATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATA 178515 | ||||| || | | || ||||| || || |||||||| ||||| ||| | ||| Sbjct 625 CCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT- 567 Query 178516 GCACATAACTTCCCGCTTGATCTTGCAGC 178544 || ||||||||||| || || || || || Sbjct 566 GCTCATAACTTCCCTCTAGACCTAGCTGC 538 >seq2 Length=30838379 Score = 295 bits (326), Expect = 8e-75 Identities = 402/556 (72%), Gaps = 4/556 (1%) Strand=Plus/Minus Query 177585 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 177644 |||||||| || | |||||||| || || ||||||| || ||| | ||| | |||||| Sbjct 6214840 AACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 6214781 Query 177645 ATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGACATCGACGGCATCCGTGA 177703 |||| || || |||||||| | | |||||| || || || || ||||| || ||||| Sbjct 6214780 -TCTGTATTTATTATCGCCTTCATTGTTGCTCCTCCAGTAGATATTGACGGTATTCGTGA 6214722 Query 177704 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 177763 || || ||| || || | ||||| ||||| || || |||||||| || | || | Sbjct 6214721 ACTTGTTTCTGAATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTAC 6214662 Query 177764 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 177823 ||| || || ||| | || || || || || |||||||| ||||| ||||||| || Sbjct 6214661 TTCTGCAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATG 6214602 Query 177824 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGC 177883 | | || || || ||||||| | || | || | |||||| | | || | | Sbjct 6214601 GTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 6214542 Query 177884 ATATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGT 177943 || ||||| ||||||||||||||| | |||| | ||||||| || ||||| ||| Sbjct 6214541 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTATGGGTATGCATCCTTGGATTGTTGT 6214482 Query 177944 TGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTAG-TCTATCCTTTCGGTC 178002 |||||| || || | |||||||||||| | | || ||||| | |||| || | |||| Sbjct 6214481 TGCATATTCAGCTCTTGTTGCAGCAGCGACTACTGT-TTTCTTGATCTACCCAATTGGTC 6214423 Query 178003 AAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTG 178062 |||| || || |||| ||||||||| || |||||||||||||| |||| |||| ||| Sbjct 6214422 AAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTG 6214363 Query 178063 TATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGG 178122 |||| | || || ||||| |||||||||||||| ||||||||| | || | ||| | | Sbjct 6214362 TATTATAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCATAGCTTGTG 6214303 Query 178123 TATTCGGTGGATCTCT 178138 |||| || || || || Sbjct 6214302 TATTTGGCGGCTCCCT 6214287 >seq3 Length=28715784 Score = 266 bits (294), Expect = 4e-66 Identities = 374/534 (70%), Gaps = 36/534 (7%) Strand=Plus/Minus Query 179454 AGGTTTCCACAACTGGACACTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGG 179513 ||| || || || |||||| | ||||||||||| |||||||||||||| ||| | |||| Sbjct 8270069 AGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGG 8270010 Query 179514 TGGTGCTCTGCTCTCTGCTATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGATGG 179573 | ||||||||| | ||| |||||||| | || ||||| ||||| || | ||||||||| Sbjct 8270009 CGCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGG 8269950 Query 179574 AGAACAAGCAAACACATTT--------------------------AAA----------GC 179597 || ||||||||||| ||| || Sbjct 8269949 TGATGGTGCAAACACATTACGTGTTTTTAACCCAACGCAAGCCGAAAACACATTCCGTGC 8269890 Query 179598 GTTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTC 179657 || || | ||||||| || || |||||||| ||||| || || ||||| |||||||| Sbjct 8269889 TTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTC 8269830 Query 179658 GCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGT 179717 || ||||| |||||| | ||| |||||| |||||||| || ||||||| | | ||||| Sbjct 8269829 TCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 8269770 Query 179718 TCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCG 179777 || || | ||| | ||| | | || |||| | | || ||||| | || || || Sbjct 8269769 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCAAAACCTACG 8269710 Query 179778 TGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTT 179837 ||||||||| || | ||||| ||| | ||||| ||||||||||| || ||||| || Sbjct 8269709 TGCTTATGACTTCATTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTTT 8269650 Query 179838 CTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCA 179897 ||| ||||| || |||||| | || || || | ||||||||| |||| || ||||| Sbjct 8269649 CTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 8269590 Query 179898 ACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 || ||||||||| | || ||||| || || || ||||| |||| ||||| || Sbjct 8269589 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 8269536 Score = 136 bits (150), Expect = 5e-27 Identities = 217/309 (70%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 ||||||||||| | |||| || || || ||||| ||||||||||| || | || Sbjct 8270417 TGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 8270358 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 8270357 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTTGTAACTTCAT 8270298 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCT 179127 |||| |||||||| | || ||||||||| | ||||| ||| ||||| | || || || Sbjct 8270297 GGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCA 8270239 Query 179128 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 179187 || ||||| ||| || || | | | |||||| | | |||| ||||||| ||| | Sbjct 8270238 GTTTCGACTCCTACTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGTCTTGAAGCA 8270179 Query 179188 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCAC 179247 || || |||| || ||||| ||| | || || || |||| ||| || ||| ||||| Sbjct 8270178 CAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTTTCCAC 8270119 Query 179248 GGTGCCTTC 179256 ||||| ||| Sbjct 8270118 GGTGCTTTC 8270110 Score = 120 bits (132), Expect = 4e-22 Identities = 183/260 (70%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 138496 CCTGTTGGCGAAGAACAAATCTTTGACTGTGCTGATGATCAGTACATCCTTGATGCTGCT 138555 |||| || || ||| ||||| ||||| ||||||| || || |||||||||||| Sbjct 4030024 CCTGGGGGAGAGGAAGAAATCA---ACTGTCCTGATGACTCGTTTATTCTTGATGCTGCT 4029968 Query 138556 GATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGTGCATGTTCTACCTGTGCT 138615 || ||||| || |||||||||| ||||| || | ||||| || || ||| ||||| || Sbjct 4029967 GAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGGGGCTTGCTCTTCCTGTACT 4029908 Query 138616 GGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCTTTCCTTGATGATGACCAA 138675 || ||| | || ||||| || || ||||| || || || || |||||||| ||| Sbjct 4029907 GGGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGATCAA 4029848 Query 138676 ATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCCACATCCGATTGTATAATTGAA 138735 |||| || ||| ||| | | ||||| | || || || ||| ||| || || || Sbjct 4029847 ATTGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGATGTTACTATAGAG 4029788 Query 138736 ACTGAAAAAGAGGACGAACT 138755 ||| | || || || || || Sbjct 4029787 ACTCACAAGGAAGAGGAGCT 4029768 >seq1 Length=28801852 Score = 163 bits (180), Expect = 3e-35 Identities = 217/300 (72%), Gaps = 1/300 (0%) Strand=Plus/Minus Query 179668 GGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATG 179727 |||||| | || |||||| |||||||| || || |||| | | ||||| || || | Sbjct 21789397 GGGGTTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACC 21789338 Query 179728 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGAT 179787 ||| | ||| | | || |||| | | || ||||| || || || ||||||||||| Sbjct 21789337 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGAC 21789278 Query 179788 TTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAG 179847 || || || || ||| | ||||| ||||||||||| || ||||| ||||| ||||| Sbjct 21789277 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAA 21789218 Query 179848 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAA 179907 || |||||| | || || || | ||||||||| |||| || ||||| || |||||| Sbjct 21789217 AATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 21789158 Query 179908 AACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACTGTGATTCAATCTCTAG 179967 ||| | || ||||| || || || ||||| |||| ||||| || | || || |||||| Sbjct 21789157 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATGGAA-CTCTAG 21789099 Score = 161 bits (178), Expect = 1e-34 Identities = 206/284 (73%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 179668 GGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATG 179727 |||||| | || |||||| |||||||| || || |||| | | ||||| || || | Sbjct 21790584 GGGGTTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACC 21790525 Query 179728 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGAT 179787 ||| | ||| | | || |||| | | || ||||| || || || ||||||||||| Sbjct 21790524 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGAC 21790465 Query 179788 TTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAG 179847 || || || || ||| | ||||| ||||||||||| || ||||| ||||| ||||| Sbjct 21790464 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAA 21790405 Query 179848 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAA 179907 || |||||| | || || || | ||||||||| |||| || ||||| || |||||| Sbjct 21790404 AATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 21790345 Query 179908 AACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 ||| | || ||||| || || || ||||| |||| ||||| || Sbjct 21790344 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 21790301 >seq8 Length=22711823 Score = 122 bits (134), Expect = 1e-22 Identities = 137/181 (76%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 179393 GTTGGTTCTTTGCGCCATCGTTT-GGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTA 179451 |||| ||||||| ||| |||||| ||||| | | |||| ||| | ||| | ||||| || Sbjct 5468307 GTTGATTCTTTGAGCC-TCGTTTTGGTGTAGTGACGATATTTCGGTTCATCCTTTTTTTC 5468365 Query 179452 CAAGGTTTCCACAACTGGACACTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTG 179511 ||||| | | || | |||| | || |||||||| |||||||||||||| ||| | | Sbjct 5468366 CAAGGGTCTTATAAGTAGACATTAAATCCCTTTCATATGATGGGAGTTGCTGGTGTATTA 5468425 Query 179512 GGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGAT 179571 |||| || || ||| | |||||||||||| ||| |||| ||||| || | ||||||| Sbjct 5468426 GGTGATGTTCAGCTATGTGCTATTCATGGCACTACTATAGAAAATACTTTATTTGAAGAT 5468485 Query 179572 G 179572 | Sbjct 5468486 G 5468486 Score = 116 bits (128), Expect = 4e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 138529 GATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGT 138588 || || ||||||||||| ||||| ||||| |||||||| | || || ||||| ||||| Sbjct 18100506 GAAGACCAGTACATCCTCGATGCAGCTGAGGAAGCAGGAGTCGACCTGCCCTATTCCTGC 18100447 Query 138589 CGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCT 138648 || |||||||| || || || |||||||| || || || || | || || ||||| Sbjct 18100446 CGCGCTGGTGCTTGCTCGACGTGTGCTGGGAAGTTGGTGTCTGGTTCAGTTGACCAGTCA 18100387 Query 138649 GACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCA 138708 || || ||||| ||||| | ||||| | || || | | | |||||||| | || Sbjct 18100386 GATGGTTCCTTCCTCGATGACAATCAAATGGAGGCTGGTTATCTGCTGACTTGCATTTCA 18100327 Query 138709 TACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTATACTGA 138762 ||||| || || ||||| | ||| | || | || || || || || | |||| Sbjct 18100326 TACCCGACTTCAGATTGCGTGATTCAGTCTCACAAGGAAGAAGAGCTTTGCTGA 18100273 Score = 109 bits (120), Expect = 7e-19 Identities = 135/185 (73%), Gaps = 5/185 (3%) Strand=Plus/Minus Query 179393 GTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCGATCTTTAGATTCCTACTT-----TT 179447 ||| |||||||||||| |||||||| | ||| || || | ||| | ||| || Sbjct 6304515 GTTAGTTCTTTGCGCCTAGTTTTGGTGTAGTGGCAATATTACGGTTCATCCTTCTTCTTT 6304456 Query 179448 CTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCACATGATGGGAGTTGCAGGTAT 179507 || ||||| | | || |||||| | ||||||||||| |||||||||||||| || | Sbjct 6304455 TTTTCAAGGGTCTTATAAGTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCTGTGT 6304396 Query 179508 CCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACTGTAGAGAATACATTGTATGA 179567 |||| | ||||||||| | |||||||||| | | ||| |||| ||||| | | ||| Sbjct 6304395 ATTGGGCGCTGCTCTGCTATGTGCTATTCATAGCGCTACTATAGAAAATACTTAATTTGA 6304336 Query 179568 AGATG 179572 |||| Sbjct 6304335 GGATG 6304331 Score = 91.5 bits (100), Expect = 2e-13 Identities = 136/187 (73%), Gaps = 6/187 (3%) Strand=Plus/Plus Query 179393 GTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCGATCTTTAGATTCCTA-CTTTTCTTA 179451 |||||||||| | ||| |||||||| | |||||| ||| |||| | ||||| || Sbjct 5452474 GTTGGTTCTTCGTGCCTAGTTTTGGTGTAGTGGCGATATTTCCATTCATCTCTTTTTTTC 5452533 Query 179452 CAAGGTTTCCACAACTGGACACTCAACCCCTTTCACATGATGGGAGTTG-CAG-GTATCC 179509 ||||| || | || | |||| | |||| |||||| ||||||| ||| | ||| |||| Sbjct 5452534 CAAGGGTTTTATAATTAGACATTAAACCTCTTTCATATGATGG-AGTCGTCAGTGTAT-- 5452590 Query 179510 TGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACTGTAGAGAATACATTGTATGAAG 179569 | ||| || | |||| | |||||||||||| | | |||||| || | ||| ||| | Sbjct 5452591 TTCGTGTTGTTTTGCTATGTGCTATTCATGGTGCTATTGTAGAAAAAAAATTAGTTGATG 5452650 Query 179570 ATGGAGA 179576 |||| || Sbjct 5452651 ATGGTGA 5452657 Score = 82.4 bits (90), Expect = 9e-11 Identities = 131/186 (70%), Gaps = 3/186 (2%) Strand=Plus/Minus Query 179393 GTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCT--T 179450 |||||||||| | || |||||||| | |||||| ||| ||||| | ||||| | | Sbjct 6321413 GTTGGTTCTTCGTGCGTAGTTTTGGTGTAGTGGCGATATTTCGATTCATCCTTTTTTGTT 6321354 Query 179451 ACAAGGTTTCCACAACTGGACACTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCT 179510 ||||| || || |||||| | || |||||||| ||||| | |||| ||| | | Sbjct 6321353 CCAAGGGTTTTGTAATTGGACATTAAATCCCTTTCATATGATAG-AGTTTTCGGTGTATT 6321295 Query 179511 GGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGA 179570 || || | |||| | |||||||||||| | | |||||| || | || |||||| Sbjct 6321294 TCATGTTGTTTTGCTATGTGCTATTCATGGTGCTATTGTAGAAAAAAATTTAGTTGAAGA 6321235 Query 179571 TGGAGA 179576 ||| || Sbjct 6321234 TGGTGA 6321229 >seq7 Length=32205869 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 138529 GATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGT 138588 |||||| |||||| | || |||| || || | || || || || |||||||| ||| Sbjct 17164005 GATGATGCTTACATCATAGACTCTGCCGAAGATACCGGAATGGAGCTACCCTACTCATGT 17163946 Query 138589 CGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCT 138648 || |||||||| || ||||| |||||||| | | ||| ||| | || || || || Sbjct 17163945 CGGGCTGGTGCCTGCTCTACTTGTGCTGGGCAGATGGTTTCAGGCTCCGTTGACCAATCA 17163886 Query 138649 GACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCA 138708 || || |||||||||||| | || || | ||| ||| | | || ||||| ||| Sbjct 17163885 GATGGATCATTCCTTGATGATAAGCAGATGGAGAAAGGTTTTGTGCTTACATGCGTTGCA 17163826 Query 138709 TACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTATACTGA 138762 || || ||||| |||||| ||||| | || | || || ||||| |||||| Sbjct 17163825 TATCCTACATCGGATTGTGTAATTTACACACACAAGGAATCTGAACTTTACTGA 17163772 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGT 138597 |||||||| || ||||||| || || || || || || |||||||| || || |||||| Sbjct 17161964 TACATCCTCGACTCTGCTGAAGATGCCGGAATGGAGCTCCCCTACTCATGCCGCGCTGGT 17161905 Query 138598 GCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCT 138657 || || ||||| || ||||| | ||| ||| |||| || || || || || Sbjct 17161904 GCCTGCTCTACTTGCGCTGGCCTGATGGTTTCAGGCTCTGTTGACCAATCAGATGGATCA 17161845 Query 138658 TTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCATACCCCACA 138717 |||||||||||| |||| || | ||| | | || | || ||| | ||||| || | | Sbjct 17161844 TTCCTTGATGATAACCAGATGGAGAAAGGTTATGTCCTTACATGCATTGCATATCCAAAA 17161785 Query 138718 TCCGATTGTATAATT 138732 || |||||| | ||| Sbjct 17161784 TCAGATTGTGTGATT 17161770 >seq20 Length=1106287 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/187 (71%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 178358 CTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTCAA 178417 ||||||||| || | ||| | ||| ||||| || ||| | ||||| ||||| ||||| Sbjct 251040 CTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAA 250981 Query 178418 CCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCG 178477 ||| || | | || | ||||| ||||| | || || ||||| || | | || || Sbjct 250980 CCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCG 250921 Query 178478 TGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACTTCCCGCTTGATC 178537 ||| || || |||||||| ||||| ||| | ||| || ||||||||||| || || | Sbjct 250920 TGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT-GCTCATAACTTCCCTCTAGACC 250862 Query 178538 TTGCAGC 178544 | || || Sbjct 250861 TAGCTGC 250855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605630526851040