Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq4844 637 5e-178 seq2 298 6e-76 seq3 215 6e-51 seq20 179 4e-40 seq1 154 2e-32 seq8 111 2e-19 seq7 82.4 9e-11 >seq4844 Length=160129 Score = 637 bits (706), Expect = 5e-178 Identities = 738/989 (75%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 159960 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 160019 ||||| | ||| ||||| || | |||||||| || | |||||||| || || || Sbjct 1523 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 1464 Query 160020 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 160078 ||||| || ||| | ||| | ||||| ||||| || || |||||||| | |||||||| Sbjct 1463 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1405 Query 160079 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 160138 || || || || ||||| || |||||||| || |||| || || | ||||| ||||| Sbjct 1404 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 1345 Query 160139 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160198 || || |||||||| || |||| |||| || || ||| | || || || || || Sbjct 1344 TATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGAT 1285 Query 160199 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 160258 |||||||| ||||| ||||||| ||| | || || || ||||||| | || | || Sbjct 1284 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 1225 Query 160259 ATTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCG 160318 | |||||| | | || | | || ||||| ||||||||||||||| | ||| Sbjct 1224 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1165 Query 160319 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGC 160378 | | |||||||| || ||||| ||| |||||||| ||||| || || ||||| |||| Sbjct 1164 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGACTGC 1105 Query 160379 TGTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160438 ||| ||| | | || || |||||||||| ||| || |||| ||||||||| || || Sbjct 1104 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 1045 Query 160439 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCC 160498 |||||||||||| || | |||| |||||||||| || || ||||| ||||||||||| || Sbjct 1044 CTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 985 Query 160499 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGG 160558 ||||||||| | ||||| ||||| |||||||| || || | ||| ||||||||| || Sbjct 984 ATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 925 Query 160559 AAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACG 160617 | || || | || | | || | ||||| || |||| || || || | Sbjct 924 TTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGCAG 866 Query 160618 GTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCG 160677 |||| | ||||||||||||||||| || || || ||||| || || || ||||| || | Sbjct 865 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTG 806 Query 160678 GTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGG 160737 | || ||||||||||||||||| |||||||| || ||||| | || |||||||||| Sbjct 805 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGG 746 Query 160738 CAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 160797 | || ||||||||||| || ||||||||||||||| | ||| ||||||| ||||| |||| Sbjct 745 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCA 686 Query 160798 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACA 160857 || | || |||||||| |||||||| || | | ||| |||||||||||||| | || | Sbjct 685 ACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 626 Query 160858 CCTGGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 160917 ||||||| || | | ||||||||| ||||||||||||||||||||||| ||||| | Sbjct 625 CCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 566 Query 160918 CACACAACTTCCCACTCGACCTCGCTGCT 160946 | || |||||||| || ||||| |||||| Sbjct 565 CTCATAACTTCCCTCTAGACCTAGCTGCT 537 Score = 531 bits (588), Expect = 6e-146 Identities = 733/1020 (72%), Gaps = 4/1020 (0%) Strand=Plus/Plus Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747 ||||| || | || |||||| | |||| || ||||||||||| || |||||||| Sbjct 35835 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 35894 Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807 || | || |||| ||| ||| | ||| | || |||||| | || |||||||| || Sbjct 35895 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTT 35954 Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTG-AGGGTGCAAACTTTCT 161866 | ||| |||||||||||||| | || ||||||||| | | ||| ||| ||||| | Sbjct 35955 GTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGC-AACTTCTT 36013 Query 161867 TACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGG 161925 || || ||||| ||||| ||| | | | | |||||| || || || || |||| Sbjct 36014 AACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCT-TTGTTGTTACTATGGG 36072 Query 161926 GTCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTTG 161985 ||||||| || ||||| ||||| |||||| ||| | || || || |||| ||||| Sbjct 36073 GTCCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTG 36132 Query 161986 TGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCAC 162045 | || || || ||||| |||| ||||| || |||||| | ||||| |||||||| || | Sbjct 36133 TTGCTCTACACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTC 36192 Query 162046 GTCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTG 162105 | | || | || || || ||||| || || ||||||| ||| ||||||||||||| Sbjct 36193 GCTCTGTTCAATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTTG 36252 Query 162106 TCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTG 162165 | || ||||| || || ||| | |||||||| ||||||| || || || |||| Sbjct 36253 TTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTG 36312 Query 162166 GGGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTGA 162225 | || || || || ||| ||||| | | ||| | ||||| || ||||| ||||| ||| Sbjct 36313 GTGTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGA 36372 Query 162226 ACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATTC 162285 ||||||| ||||||||||||||||| ||| || | || | || || |||| ||| |||| Sbjct 36373 ACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGTGCCATTC 36432 Query 162286 ACGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGG 162345 | || | || || |||||||| |||| || ||||| || |||||||| || | Sbjct 36433 ATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCGTG 36492 Query 162346 CGTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGT 162405 | ||| | | || || | ||||| || ||||| |||||||| || |||||||| |||| Sbjct 36493 CTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGT 36552 Query 162406 CGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTG 162465 | || ||||| || |||| ||||| || || || ||| | ||||| || ||||| |||| Sbjct 36553 CTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 36612 Query 162466 TGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTC 162525 | || || | ||| |||||| || |||| | | || || || || ||||| | Sbjct 36613 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTAC 36672 Query 162526 GTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGT 162585 ||||||| || ||||| ||||| ||| | ||||| ||||||||||| ||||| || | Sbjct 36673 GTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTT 36732 Query 162586 TCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACC 162645 ||||||| || || ||||| | || || || | ||||| ||| | || || || | Sbjct 36733 TCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATC 36792 Query 162646 AACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 | || ||||| ||| |||| ||||| || || ||||| || | || ||||| ||||||| Sbjct 36793 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 36852 >seq2 Length=30838379 Score = 298 bits (330), Expect = 6e-76 Identities = 399/552 (72%), Gaps = 2/552 (0%) Strand=Plus/Minus Query 159987 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 160046 |||||||| || | |||||||| || || ||||||| || ||| | ||| | ||||| Sbjct 6214840 AACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 6214781 Query 160047 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 160105 ||||| || || |||||||| | | |||||| || || || || ||||| || ||||| Sbjct 6214780 -TCTGTATTTATTATCGCCTTCATTGTTGCTCCTCCAGTAGATATTGACGGTATTCGTGA 6214722 Query 160106 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 160165 || || ||| || || | ||||| ||||| || || |||||||| || |||| | Sbjct 6214721 ACTTGTTTCTGAATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTAC 6214662 Query 160166 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 160225 ||| || || ||| | || || || || || |||||||| ||||| ||||||| || Sbjct 6214661 TTCTGCAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATG 6214602 Query 160226 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTTATCGGCATCTATGC 160285 | | || || || ||||||| | || | || | |||||| | | || | | Sbjct 6214601 GTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 6214542 Query 160286 ATATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGT 160345 || ||||| ||||||||||||||| | |||| | ||||||| || ||||| ||| Sbjct 6214541 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTATGGGTATGCATCCTTGGATTGTTGT 6214482 Query 160346 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCA 160405 |||||||| |||| || || ||||| || |||| ||| | | || || | ||||| Sbjct 6214481 TGCATATTCAGCTCTTGTTGCAGCAGCGACTACTGTTTTCTTGATCTACCCAATTGGTCA 6214422 Query 160406 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 160465 ||| ||| || |||| ||||||||| || |||||||||||||| |||| |||| |||| Sbjct 6214421 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 6214362 Query 160466 ATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGT 160525 ||| | || || ||||| ||||||||||| || ||||||||| | ||| | ||| | || Sbjct 6214361 ATTATAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCATAGCTTGTGT 6214302 Query 160526 ATTCGGTGGATC 160537 ||| || || || Sbjct 6214301 ATTTGGCGGCTC 6214290 >seq3 Length=28715784 Score = 215 bits (238), Expect = 6e-51 Identities = 366/539 (68%), Gaps = 36/539 (7%) Strand=Plus/Minus Query 162203 AGGATTCCATAACTGGACCCTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGG 162262 ||| || ||||| ||||| |||||||||| ||||||||||||||||| ||| || | || Sbjct 8270069 AGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGG 8270010 Query 162263 TGGAGCACTTCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTATACGAGGATGG 162322 | || || |||| ||| ||||| || | || || |||||||| |||| || ||||| Sbjct 8270009 CGCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGG 8269950 Query 162323 AGAACAAGCAAACACCTTT-------------------AAGGCG---------------- 162347 || |||||||| || ||| || Sbjct 8269949 TGATGGTGCAAACACATTACGTGTTTTTAACCCAACGCAAGCCGAAAACACATTCCGTGC 8269890 Query 162348 -TTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 162406 ||| | | || || | ||||| || ||||| |||||||| || |||||||| ||||| Sbjct 8269889 TTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTC 8269830 Query 162407 GCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGT 162466 || ||||| || |||| ||||| || || || ||| | ||||| || ||||| ||||| Sbjct 8269829 TCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 8269770 Query 162467 GCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCG 162526 || || | ||| |||||| || |||| | | || || || | ||||| || Sbjct 8269769 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCAAAACCTACG 8269710 Query 162527 TGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTT 162586 |||||| || ||| | || || ||| | ||||| ||||||||||| ||||| || || Sbjct 8269709 TGCTTATGACTTCATTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTTT 8269650 Query 162587 CTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCA 162646 |||||| || || ||||| | || || || | ||||| ||| | || || || || Sbjct 8269649 CTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 8269590 Query 162647 ACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 || ||||| ||| |||| ||||| || || ||||| || | || ||||| ||||||| Sbjct 8269589 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 8269531 Score = 134 bits (148), Expect = 2e-26 Identities = 225/320 (70%), Gaps = 4/320 (1%) Strand=Plus/Minus Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747 ||||| || | || |||||| | |||| || ||||||||||| || |||||||| Sbjct 8270427 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 8270368 Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807 || | || |||| ||| ||| | ||| | || |||||| | || |||||||| || Sbjct 8270367 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTT 8270308 Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTG-AGGGTGCAAACTTTCT 161866 | ||| |||||||||||||| | || ||||||||| | | ||| ||| ||||| | Sbjct 8270307 GTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGC-AACTTCTT 8270249 Query 161867 TACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGG 161925 || || ||||| ||||| || | | | | |||||| || || || || |||| Sbjct 8270248 AACCGCCGCAGTTTCGACTCCTACTAATAGTTTAGCGCATTCT-TTGTTGTTACTATGGG 8270190 Query 161926 GTCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTTG 161985 ||| ||| || ||||| ||||| |||||| ||| | || || || |||| ||||| Sbjct 8270189 GTCTTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTG 8270130 Query 161986 TGGCACTCCATGGTGCCTTC 162005 | || |||| ||||| ||| Sbjct 8270129 TTGCTTTCCACGGTGCTTTC 8270110 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 161129 ATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGTGCT 161188 ||| | ||||| || ||||| || || ||||| || || || || | ||||| ||| Sbjct 4029982 ATTCTTGATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGGGGCT 4029923 Query 161189 TGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCCTTC 161248 |||||||||||| | || ||| || | || || || || |||||||| || || ||| Sbjct 4029922 TGCTCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTT 4029863 Query 161249 TTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTACTAGC 161308 |||||||||| || |||| | || || || | || |||| ||| ||||| || || Sbjct 4029862 CTGGATGATGATCAAATTGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGT 4029803 Query 161309 GAT 161311 ||| Sbjct 4029802 GAT 4029800 >seq20 Length=1106287 Score = 179 bits (198), Expect = 4e-40 Identities = 152/187 (81%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 160760 CTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAA 160819 ||||||||||||| | ||| ||||||| ||||| |||||| | || |||||||| ||||| Sbjct 251040 CTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAA 250981 Query 160820 CCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCG 160879 ||| || | | ||| |||||||||||||| | || |||||||| || | | ||||| Sbjct 250980 CCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCG 250921 Query 160880 TGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCT 160939 |||| ||||||||||||||||||||||| ||||| || || |||||||| || ||||| Sbjct 250920 TGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCT 250861 Query 160940 CGCTGCT 160946 |||||| Sbjct 250860 AGCTGCT 250854 >seq1 Length=28801852 Score = 154 bits (170), Expect = 2e-32 Identities = 205/285 (72%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 162421 TTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTC 162480 |||| |||| || || || ||| | |||||||| ||||| ||||| || || | ||| Sbjct 21789393 TTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACCGGTT 21789334 Query 162481 TATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCG 162540 |||||| || |||| | | || || || || ||||| |||||||| || |||| Sbjct 21789333 TATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCG 21789274 Query 162541 TGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTTCTACACTAAGAACA 162600 | ||||| ||| | ||||| ||||||||||| ||||| || |||||||| || || | Sbjct 21789273 TTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATA 21789214 Query 162601 TTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATGAGAACT 162660 |||| | || || || | ||||| ||| | || || || || || ||||| ||| Sbjct 21789213 TTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 21789154 Query 162661 TTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 |||| ||||| || || ||||| || | || ||||| ||||||| Sbjct 21789153 TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 21789109 Score = 154 bits (170), Expect = 2e-32 Identities = 205/285 (72%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 162421 TTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTC 162480 |||| |||| || || || ||| | |||||||| ||||| ||||| || || | ||| Sbjct 21790580 TTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACCGGTT 21790521 Query 162481 TATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCG 162540 |||||| || |||| | | || || || || ||||| |||||||| || |||| Sbjct 21790520 TATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCG 21790461 Query 162541 TGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTTCTACACTAAGAACA 162600 | ||||| ||| | ||||| ||||||||||| ||||| || |||||||| || || | Sbjct 21790460 TTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATA 21790401 Query 162601 TTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATGAGAACT 162660 |||| | || || || | ||||| ||| | || || || || || ||||| ||| Sbjct 21790400 TTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 21790341 Query 162661 TTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 |||| ||||| || || ||||| || | || ||||| ||||||| Sbjct 21790340 TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 21790296 >seq8 Length=22711823 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 161119 AGACCAGTACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCG 161178 |||||||||||| | |||||||| || || |||||||| || | |||||| || || Sbjct 18100504 AGACCAGTACATCCTCGATGCAGCTGAGGAAGCAGGAGTCGACCTGCCCTATTCCTGCCG 18100445 Query 161179 TGCTGGTGCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGA 161238 |||||||||||||| | ||||| || || | | || ||| |||| |||||||| || Sbjct 18100444 CGCTGGTGCTTGCTCGACGTGTGCTGGGAAGTTGGTGTCTGGTTCAGTTGACCAGTCAGA 18100385 Query 161239 CCAGTCCTTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATA 161298 |||||| | ||||| | || || || |||| | || |||| || || |||| Sbjct 18100384 TGGTTCCTTCCTCGATGACAATCAAATGGAGGCTGGTTATCTGCTGACTTGCATTTCATA 18100325 Query 161299 TCCTACTAGCGATTGTGTGATTCA 161322 || ||| ||||| |||||||| Sbjct 18100324 CCCGACTTCAGATTGCGTGATTCA 18100301 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 162195 TTTCTTCAAGGATTCCATAACTGGACCCTGAACCCCTTCCATATGATGGGAGTTGCTGGT 162254 ||| ||||||| | |||| ||||| |||||||||| ||||||||||||||||| || Sbjct 6304457 TTTTTTCAAGGGTCTTATAAGTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCTGT 6304398 Query 162255 ATACTAGGTGGAGCACTTCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTATAC 162314 || | || | || || |||| ||||||||| | | || | |||||||| | || Sbjct 6304397 GTATTGGGCGCTGCTCTGCTATGTGCTATTCATAGCGCTACTATAGAAAATACTTAATTT 6304338 Query 162315 GAGGATG 162321 ||||||| Sbjct 6304337 GAGGATG 6304331 >seq7 Length=32205869 Score = 82.4 bits (90), Expect = 9e-11 Identities = 153/223 (69%), Gaps = 5/223 (2%) Strand=Plus/Minus Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185 ||||| |||| | || ||||| | ||| | || | ||| || ||||| |||||| Sbjct 17163996 TACATCATAGACTCTGCCGAAGATACCGGAATGGAGCTACCCTACTCATGTCGGGCTGGT 17163937 Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245 || |||||| | ||||| || | || ||||||| | || ||||| || || || Sbjct 17163936 GCCTGCTCTACTTGTGCTGGGCAGATGGTTTCAGGCTCCGTTGACCAATCAGATGGATCA 17163877 Query 161246 TTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTACT 161305 ||| | |||||| | ||||| || || || | | ||||| |||||||||||||| Sbjct 17163876 TTCCTTGATGATAAGCAGATGGAGAAAGGTTTTGTGCTTACATGCGTTGCATATCCTACA 17163817 Query 161306 AGCGATTGTGTGATTCAAACTGAGCAAGAGGAGAATCTGTACT 161348 |||||||| ||| | || | |||| ||||||| ||| Sbjct 17163816 TCGGATTGTGTAATTTACACACA-CAAG----GAATCTGAACT 17163779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559470122032800