Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq4844 592 2e-164 seq2 300 2e-76 seq3 264 1e-65 seq1 170 2e-37 seq8 104 3e-17 >seq4844 Length=160129 Score = 592 bits (656), Expect = 2e-164 Identities = 725/987 (73%), Gaps = 2/987 (0%) Strand=Plus/Minus Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040 ||||| | ||| ||||| || | |||||||| || | |||||||| || || || Sbjct 1523 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 1464 Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 181099 ||||| || ||| | ||| | |||||| ||||| || || |||||||| | |||||||| Sbjct 1463 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1405 Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159 || || || || ||||| || |||||||| || |||| || || | ||||| ||||| Sbjct 1404 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 1345 Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219 || || |||||||| || |||| |||| || || ||| | || || || || || Sbjct 1344 TATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGAT 1285 Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 181279 |||||||| ||||| ||||||| ||| | || || || ||||||| | || | || Sbjct 1284 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 1225 Query 181280 CTTTCACTTCCTTATCGGCATTTATGCATACATGGGACGTGAATGGGAACTCTCTTACCG 181339 | |||||| | | || | | |||||||| ||||| |||||||| || ||| Sbjct 1224 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1165 Query 181340 CTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATCTGC 181399 | |||||||| || ||||| ||||||||| || ||||| || |||||||| |||| Sbjct 1164 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGACTGC 1105 Query 181400 TGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCAT 181459 ||| ||| | |||| || |||||||||| ||| ||||| | ||||| || || || Sbjct 1104 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 1045 Query 181460 CTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGATGCATCC 181519 ||||||||| ||||| | |||| |||| ||||| || ||||||||||| || ||||| || Sbjct 1044 CTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 985 Query 181520 CTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGTTCAGTGCAATGCACGG 181579 ||||||||||| || || || |||||||| || || || || |||||||| ||||| || Sbjct 984 ATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 925 Query 181580 TTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGG 181639 ||| ||||| || ||| | || | || || || |||| ||| || || || Sbjct 924 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGCAGG 865 Query 181640 TTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTTGG 181699 ||||| ||||| ||||| ||||| || || || ||||| || || |||||||| ||||| Sbjct 864 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGG 805 Query 181700 TCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGC 181759 || |||||||||||||||||| |||||||| || ||||| | || |||||||| || Sbjct 804 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGC 745 Query 181760 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAA 181819 || ||||||||||| || ||||||||||| || | || | ||||| ||||| || || Sbjct 744 TGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAA 685 Query 181820 CCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACAC 181879 | | ||||| ||||| |||||||| ||| | | || | ||||| ||||| | || || Sbjct 684 CTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 625 Query 181880 CTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGC 181939 |||||| || | | || ||||| || || |||||||| ||||| || || || || Sbjct 624 CTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 565 Query 181940 GCACAACTTCCCGCTTGATCTTGCAGC 181966 || |||||||| || || || || || Sbjct 564 TCATAACTTCCCTCTAGACCTAGCTGC 538 Score = 547 bits (606), Expect = 8e-151 Identities = 731/1008 (73%), Gaps = 10/1008 (1%) Strand=Plus/Plus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 |||| |||||| | |||| || || || ||||| ||||||||||| || | || Sbjct 35845 TGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 35904 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 35905 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTTGTAACTTCAT 35964 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCT 182549 |||| ||||| || | || ||||||| | ||||| ||| ||||| | || || || Sbjct 35965 GGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCA 36023 Query 182550 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 182609 || ||||| |||||| || | | | |||||| | | |||| ||||||||||| | Sbjct 36024 GTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCA 36083 Query 182610 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 182669 || || |||| || ||||| ||| | || || || |||| ||| || ||||| ||| Sbjct 36084 CAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTACAC 36143 Query 182670 GGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGG 182728 ||||| |||| || || ||||||||| | | |||||||||||||||||| ||| || Sbjct 36144 GGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGCTCTG-TTCA 36202 Query 182729 AATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTT 182788 | | ||||||| ||||| || || || |||| ||| |||||||| || || ||| || Sbjct 36203 ATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATT 36262 Query 182789 CCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGC 182848 ||| || ||||| | || ||||| |||||| || ||||| |||||||| ||||| Sbjct 36263 CCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGC 36322 Query 182849 GATCTTCAGGT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTT 182905 ||| || | | |||| || |||| ||||||| || || |||||| | |||||||| Sbjct 36323 GATATTTCGATTCATCCTTTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCCTT 36379 Query 182906 CCATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGT 182965 ||||||||||||||||| ||| || |||| | || ||||| |||| || ||||| | Sbjct 36380 TCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGTGCCATTCATGGCGC 36439 Query 182966 CACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGA 183025 || ||||| ||||| || | ||||||||| || ||||||||||| || || | Sbjct 36440 TACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAA 36499 Query 183026 TTCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAAT 183085 | || || | || || |||||||||||||| || || || || |||||||| ||||| Sbjct 36500 CCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAAT 36559 Query 183086 CTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGT 183145 ||| |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || Sbjct 36560 CTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGT 36619 Query 183146 CATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTA 183205 | ||| | ||| | | || |||| | | || || || || || || |||||||| Sbjct 36620 AACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTA 36679 Query 183206 TGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACAC 183265 ||| || || || || || | ||||| ||||||||||| || ||||| |||||||| Sbjct 36680 TGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACAC 36739 Query 183266 AAAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACA 183325 ||| || || ||| | || || || | ||||||||| |||| || ||||| || || Sbjct 36740 AAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCA 36799 Query 183326 TGAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 ||||||| | || |||||||| || |||||||| | || ||||| || Sbjct 36800 TGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 36847 >seq2 Length=30838379 Score = 300 bits (332), Expect = 2e-76 Identities = 401/555 (72%), Gaps = 2/555 (0%) Strand=Plus/Minus Query 181008 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 181067 |||||||| || | |||||||| || || ||||||| || ||| | ||| | |||||| Sbjct 6214840 AACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 6214781 Query 181068 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 181126 ||||| || || |||||||| | | |||||| || || || || ||||| || ||||| Sbjct 6214780 -TCTGTATTTATTATCGCCTTCATTGTTGCTCCTCCAGTAGATATTGACGGTATTCGTGA 6214722 Query 181127 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 181186 || || ||| || || | ||||| ||||| || || |||||||| || |||| | Sbjct 6214721 ACTTGTTTCTGAATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTAC 6214662 Query 181187 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 181246 ||| || || ||| | || || || || || |||||||| ||||| ||||||| || Sbjct 6214661 TTCTGCAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATG 6214602 Query 181247 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATTTATGC 181306 | | || || || ||||||| | || | || | |||||| | | || | | Sbjct 6214601 GTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 6214542 Query 181307 ATACATGGGACGTGAATGGGAACTCTCTTACCGCTTAGGTATGCGCCCCTGGATCTGTGT 181366 |||||||| ||||| |||||||| || ||| | ||||||| || ||||| ||| Sbjct 6214541 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTATGGGTATGCATCCTTGGATTGTTGT 6214482 Query 181367 TGCATACTCTGCTCCAGTCGCAGCAGCATCTGCTGTATTCCTAGTCTATCCTTTCGGTCA 181426 |||||| || |||| || |||||||| || |||| ||| | |||| || | ||||| Sbjct 6214481 TGCATATTCAGCTCTTGTTGCAGCAGCGACTACTGTTTTCTTGATCTACCCAATTGGTCA 6214422 Query 181427 AGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGT 181486 ||| ||| ||||| | ||||| || || ||||||||||| ||||||| |||| |||| Sbjct 6214421 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 6214362 Query 181487 TTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGT 181546 || | || ||||||||||| || ||||| || ||||||||||| || | || |||| Sbjct 6214361 ATTATAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCATAGCTTGTGT 6214302 Query 181547 ATTTGGTGGTTCACT 181561 |||||| || || || Sbjct 6214301 ATTTGGCGGCTCCCT 6214287 >seq3 Length=28715784 Score = 264 bits (292), Expect = 1e-65 Identities = 378/535 (71%), Gaps = 37/535 (7%) Strand=Plus/Minus Query 182875 AGGGTTTCCACAACTGGACACTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTGG 182934 |||||||| | || |||||| | |||||||| ||||||||||||||||| ||| || ||| Sbjct 8270069 AGGGTTTC-ATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGG 8270011 Query 182935 GTGGAGCACTGCTCAGTGCTATCCATGGTGTCACAGTAGAGAATACCTTGTATGAAGATG 182994 | | || ||||| |||| || ||||| | || ||||| ||||| || | |||||||| Sbjct 8270010 GCGCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATG 8269951 Query 182995 GAGAACAGGCAAACACATT---------TAA---------AGCG---------TTC---G 183024 | || ||||||||||| ||| ||| ||| | Sbjct 8269950 GTGATGGTGCAAACACATTACGTGTTTTTAACCCAACGCAAGCCGAAAACACATTCCGTG 8269891 Query 183025 ATT------CCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGT 183078 || | || || | || || |||||||||||||| || || || || ||||||| Sbjct 8269890 CTTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGT 8269831 Query 183079 CACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTG 183138 | |||||||| |||||||| ||| |||||| |||||||| || ||||||||||| |||| Sbjct 8269830 CTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 8269771 Query 183139 TTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTC 183198 | || || | ||| | ||| | | || |||| | | || || || | || || | Sbjct 8269770 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCAAAACCTAC 8269711 Query 183199 GTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGT 183258 |||||||||| || | ||||| || | ||||| ||||||||||| || ||||| | Sbjct 8269710 GTGCTTATGACTTCATTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTT 8269651 Query 183259 TCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATC 183318 |||||||||| || || ||| | || || || | ||||||||| |||| || |||| Sbjct 8269650 TCTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATC 8269591 Query 183319 AACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 | || ||||||||| | || |||||||| || |||||||| | || ||||| || Sbjct 8269590 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 8269536 Score = 118 bits (130), Expect = 1e-21 Identities = 213/309 (69%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 |||| |||||| | |||| || || || ||||| ||||||||||| || | || Sbjct 8270417 TGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 8270358 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 8270357 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTTGTAACTTCAT 8270298 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCT 182549 |||| ||||| || | || ||||||| | ||||| ||| ||||| | || || || Sbjct 8270297 GGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCA 8270239 Query 182550 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 182609 || ||||| ||| || || | | | |||||| | | |||| ||||||| ||| | Sbjct 8270238 GTTTCGACTCCTACTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGTCTTGAAGCA 8270179 Query 182610 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 182669 || || |||| || ||||| ||| | || || || |||| ||| || ||| ||||| Sbjct 8270178 CAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTTTCCAC 8270119 Query 182670 GGTGCCTTC 182678 ||||| ||| Sbjct 8270118 GGTGCTTTC 8270110 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 179470 GATGATCAGTATATCCTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGT 179529 ||||| || ||| ||||| |||||||||||||| || | ||| | ||||| || Sbjct 4029994 GATGACTCGTTTATTCTTGATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGC 4029935 Query 179530 CGTGCTGGTGCTTGTTCATCTTGTGCTGGTAAATTAGAGAGTGGATCTGTTGATCAAAGC 179589 | ||||| ||||| || || ||| |||| ||| | | | |||| | ||||| || Sbjct 4029934 AGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGTCG 4029875 Query 179590 GATCAATCGTTTTTGGATGACGATCAAA-TGGAGTCGGGATTTATTCTGACTTGCGTATC 179648 || ||| ||| ||||||| ||||||| ||||| || ||| |||| ||||| | | Sbjct 4029874 GAGCAAAGCTTTCTGGATGATGATCAAATTGGAG-AAGGTTTTGTTCTCACTTGTGCTGC 4029816 Query 179649 TTATCCTACTAGTGAT 179664 |||||| || |||||| Sbjct 4029815 TTATCCAACAAGTGAT 4029800 >seq1 Length=28801852 Score = 170 bits (188), Expect = 2e-37 Identities = 208/284 (73%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 183090 GGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATG 183149 |||||||| || |||||| |||||||| || || |||||||| ||||| || || | Sbjct 21789397 GGGGTTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACC 21789338 Query 183150 GGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGAT 183209 ||| | ||| | | || |||| | | || || || || || || ||||||||||| Sbjct 21789337 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGAC 21789278 Query 183210 TTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAAAG 183269 || || || || || | ||||| ||||||||||| || ||||| ||||||||||| Sbjct 21789277 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAA 21789218 Query 183270 AACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACATGAA 183329 || || ||| | || || || | ||||||||| |||| || ||||| || |||||| Sbjct 21789217 AATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 21789158 Query 183330 AACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 ||| | || |||||||| || |||||||| | || ||||| || Sbjct 21789157 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 21789114 Score = 170 bits (188), Expect = 2e-37 Identities = 208/284 (73%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 183090 GGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATG 183149 |||||||| || |||||| |||||||| || || |||||||| ||||| || || | Sbjct 21790584 GGGGTTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACC 21790525 Query 183150 GGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGAT 183209 ||| | ||| | | || |||| | | || || || || || || ||||||||||| Sbjct 21790524 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGAC 21790465 Query 183210 TTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAAAG 183269 || || || || || | ||||| ||||||||||| || ||||| ||||||||||| Sbjct 21790464 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAA 21790405 Query 183270 AACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACATGAA 183329 || || ||| | || || || | ||||||||| |||| || ||||| || |||||| Sbjct 21790404 AATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 21790345 Query 183330 AACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 ||| | || |||||||| || |||||||| | || ||||| || Sbjct 21790344 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 21790301 Score = 111 bits (122), Expect = 2e-19 Identities = 214/312 (69%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 181465 GTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCC 181524 |||| ||||||| |||| |||| ||||| || ||||||| |||||| ||||| | |||| Sbjct 20504928 GTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAGCATTCTTGTGCATTCATTCC 20504869 Query 181525 ACATGTTGGGTGTCGCAGGTGTATTTGGT--GGTTCACTGTTCAGTGCAATGCACGGTTC 181582 ||||||| || | ||| || |||| | || | |||| | |||||||||| Sbjct 20504868 ACATGTT--ATGACTAAGGCTTAGCTGGTGCGTTTGGCGGTTC---CCTATGCACGGTTA 20504814 Query 181583 TTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTA 181642 ||||| || ||| | |||| || || || |||| ||| || | || | | || Sbjct 20504813 CTTGGTAACCTCTAGTTTGATCCGGGAAACCACAGAAAATGAATCTCCCAAGGAAAGATA 20504754 Query 181643 CAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTTGGTCG 181702 || || || | ||| || || || ||| | || || | || || | ||| ||||| Sbjct 20504753 CAGATTTGGTCCAGAGGAGGAAACTTACGATATTGTATCTGCTCATGTTTATTTTGGCTT 20504694 Query 181703 CTTGAT-CTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAG 181761 ||||| ||||| ||||||| ||| ||| || | ||| | || |||||||| | | Sbjct 20504693 ATTGATACTTCCGATATGCTGGTTTCCGCAATTCTCATTCTTTACATTTCTTCCTAGATG 20504634 Query 181762 CATGGCCTGTAG 181773 | ||||||||| Sbjct 20504633 CTGGGCCTGTAG 20504622 >seq8 Length=22711823 Score = 104 bits (114), Expect = 3e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 179468 AGGATGATCAGTATATCCTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTT 179527 |||| || ||||| ||||| || || ||||| |||||||| || || | || || | Sbjct 18100508 AGGAAGACCAGTACATCCTCGATGCAGCTGAGGAAGCAGGAGTCGACCTGCCCTATTCCT 18100449 Query 179528 GTCGTGCTGGTGCTTGTTCATCTTGTGCTGGTAAATTAGAGAGTGGATCTGTTGATCAAA 179587 | || ||||||||||| || | |||||||| || || | | ||| || ||||| || Sbjct 18100448 GCCGCGCTGGTGCTTGCTCGACGTGTGCTGGGAAGTTGGTGTCTGGTTCAGTTGACCAGT 18100389 Query 179588 GCGATCAATCGTTTTTGGATGACGATCAAATGGAGTCGGGATTTATTCTGACTTGCGTAT 179647 ||| || || | |||||| ||||||||||| | || | | | ||||||||| | | Sbjct 18100388 CAGATGGTTCCTTCCTCGATGACAATCAAATGGAGGCTGGTTATCTGCTGACTTGCATTT 18100329 Query 179648 CTTATCCTACTAGTGATTGCGT 179669 | || || ||| |||||||| Sbjct 18100328 CATACCCGACTTCAGATTGCGT 18100307 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/163 (72%), Gaps = 6/163 (4%) Strand=Plus/Plus Query 182835 TTTGGTGTCGCGGCGATCTTCAGGTTC---CTGTTGTTCCTTCAGGGTTTCCACAACTGG 182891 |||||||| | | |||| || ||||| || || |||| ||||| | | || | | Sbjct 5468327 TTTGGTGTAGTGACGATATTTCGGTTCATCCTTTTTTTCCA--AGGGTCTT-ATAAGTAG 5468383 Query 182892 ACACTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGT 182951 ||| | || ||||| ||||||||||||||||||||| || | |||| | | ||| || Sbjct 5468384 ACATTAAATCCCTTTCATATGATGGGAGTTGCTGGTGTATTAGGTGATGTTCAGCTATGT 5468443 Query 182952 GCTATCCATGGTGTCACAGTAGAGAATACCTTGTATGAAGATG 182994 ||||| ||||| || |||| ||||| || | |||||||| Sbjct 5468444 GCTATTCATGGCACTACTATAGAAAATACTTTATTTGAAGATG 5468486 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/191 (70%), Gaps = 5/191 (3%) Strand=Plus/Minus Query 182809 AGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTCCTG-TTG 182867 |||| | || ||| || ||||| |||||||| | ||| || || ||||| | || Sbjct 6304521 AGTCTTGTTAGTTCTTTGCGCCTAGTTTTGGTGTAGTGGCAATATTACGGTTCATCCTTC 6304462 Query 182868 TTCCTT----CAGGGTTTCCACAACTGGACACTCAACCCCTTCCATATGATGGGAGTTGC 182923 ||| || || || | | || |||||| | |||||||| ||||||||||||||||| Sbjct 6304461 TTCTTTTTTTCAAGGGTCTTATAAGTGGACATTGAACCCCTTTCATATGATGGGAGTTGC 6304402 Query 182924 TGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCACAGTAGAGAATACCTT 182983 || || |||| | || ||||| ||||||| ||| | | || |||| ||||| | Sbjct 6304401 CTGTGTATTGGGCGCTGCTCTGCTATGTGCTATTCATAGCGCTACTATAGAAAATACTTA 6304342 Query 182984 GTATGAAGATG 182994 | ||| |||| Sbjct 6304341 ATTTGAGGATG 6304331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614580384904320