Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq4844 690 0.0 seq2 307 1e-78 seq3 221 2e-52 seq20 179 5e-40 seq1 140 4e-28 seq8 122 1e-22 seq7 105 8e-18 >seq4844 Length=160129 Score = 690 bits (764), Expect = 0.0 Identities = 750/990 (76%), Gaps = 4/990 (0%) Strand=Plus/Minus Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254 |||||| | ||||| || |||||| | |||||||| || | ||||||||||| | Sbjct 1524 CTTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTT 1465 Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313 |||||| || ||| | ||| | ||||| |||| || || | |||||| | ||||||| Sbjct 1464 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 1406 Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373 |||| || || || ||||| || || ||||| ||| |||| || || | |||||||||| Sbjct 1405 CTCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 1346 Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCA 183433 | || || |||||||| || ||||| |||| || || || | || || || || | Sbjct 1345 ATATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGA 1286 Query 183434 TCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAG 183493 | |||||||| ||||| | ||||| ||| | || || || |||||||| | || | | Sbjct 1285 TATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTG 1226 Query 183494 TCTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACC 183553 | | |||||| | |||| || || ||||||||||||||||||||| | || || Sbjct 1225 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCC 1166 Query 183554 GTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCG 183613 |||| ||||||||||||||||| |||||| ||| || |||||||| || || || | Sbjct 1165 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGACTG 1106 Query 183614 CTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTA 183673 |||| ||| || |||| || |||||||||| |||| |||||||||||| || || | Sbjct 1105 CTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 1046 Query 183674 TCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 183733 || ||| || || || | ||| |||| ||||| || |||||||||||||| ||||||| Sbjct 1045 TCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 986 Query 183734 CCTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACG 183793 | ||||||||| | || || |||||||| ||||| || || || |||||||| ||||| | Sbjct 985 CATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 926 Query 183794 GTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTAT 183852 |||| |||| || | || | | | || | |||||||| || ||| || || Sbjct 925 GTTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGCA 867 Query 183853 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTT 183912 ||||||| ||||||||||| ||||| || || || || || |||||||| || || ||| Sbjct 866 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTT 807 Query 183913 GGTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTT 183972 || || |||||||||| |||||| || ||||||||||||||| | || |||||||| Sbjct 806 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTG 747 Query 183973 GCTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTT 184032 ||||||||||| || || || |||||||| |||||| | ||| ||||||||||||| || Sbjct 746 GCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTC 687 Query 184033 AACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAAC 184092 ||| | |||||||| || |||||||| || | ||||| ||||||||||||| | || Sbjct 686 AACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 627 Query 184093 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAAT 184152 |||||||| || || | || |||||| ||||| |||||||| ||||| || |||||| Sbjct 626 ACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 567 Query 184153 GCTCACAACTTCCCTCTCGACCTTGCTGCT 184182 ||||| ||||||||||| ||||| |||||| Sbjct 566 GCTCATAACTTCCCTCTAGACCTAGCTGCT 537 Score = 504 bits (558), Expect = 9e-138 Identities = 718/1005 (71%), Gaps = 4/1005 (0%) Strand=Plus/Plus Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030 ||||||||||| | | ||||| || || ||||| || |||||||| || | || | Sbjct 35845 TGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 35904 Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090 |||| ||| ||| | || | || || ||| | || |||||||| ||||| || | Sbjct 35905 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTTGTAACTTCAT 35964 Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGG-TGCTAATTTTCTCACGGCAGCA 186149 |||||||||| || || || ||| || | || || ||| | || | | || || ||| Sbjct 35965 GGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGCAACTTCT-TAACCGCCGCA 36023 Query 186150 GTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 186209 || || ||||||||| | | | | |||||| | | |||| ||||||||||| | Sbjct 36024 GTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCA 36083 Query 186210 CAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCAC 186269 ||||||||| | | ||||||| ||| | || || || |||| |||||| || || ||| Sbjct 36084 CAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTACAC 36143 Query 186270 GGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCGTCTC-GTAGG 186328 || || || | || |||||||||||| | || || |||||| | ||| ||| || Sbjct 36144 GGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG-CTCTGTTCA 36202 Query 186329 TATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATT 186388 | || || || ||||| || || || |||| ||| || ||||| |||||| |||||| Sbjct 36203 ATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATT 36262 Query 186389 CCTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGC 186448 ||| || || || || || ||||| |||||||| || || ||||| || || || Sbjct 36263 CCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGC 36322 Query 186449 AATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCA 186508 || ||| ||||| | | || ||||||| || || || ||||| ||||| || || || Sbjct 36323 GATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCA 36382 Query 186509 CATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTAC 186568 |||||||| || || ||| | | || | ||||||||| | || || ||||| | ||| Sbjct 36383 TATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGTGCCATTCATGGCGCTAC 36442 Query 186569 TGTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTCAAAGCATTCGATAC 186628 |||||||||||| | | ||||||||| || |||||||||||| || || | | Sbjct 36443 CGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCC 36502 Query 186629 GACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATCTT 186688 ||||||| ||||||||||||||||||||||| || ||| | || ||||| || ||||| Sbjct 36503 AACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTT 36562 Query 186689 CGGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTAT 186748 || |||| ||| |||||| |||||| | |||||||| ||| | ||||| || || | Sbjct 36563 TGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAAC 36622 Query 186749 GGGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGA 186808 ||| | |||| | | |||| | | || || || || ||||| ||||||||||| Sbjct 36623 CGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGA 36682 Query 186809 CTTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAA 186868 ||| || ||||| | | ||||| || |||||||| || ||||| ||||| || || Sbjct 36683 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAA 36742 Query 186869 GAATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATGA 186928 ||||| || || || || ||| | ||||| |||||||| | ||||| || ||||| Sbjct 36743 AAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 36802 Query 186929 AAACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973 |||| || |||| ||||| || || | || | || |||||||| Sbjct 36803 AAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 36847 >seq2 Length=30838379 Score = 307 bits (340), Expect = 1e-78 Identities = 410/567 (72%), Gaps = 2/567 (0%) Strand=Plus/Minus Query 183211 ACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACTGATGATTCCAACTCTG 183270 || |||||| | |||||||| || | ||||||||||| ||||||| || ||| | Sbjct 6214852 ACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTA 6214793 Query 183271 TTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTCCTCCTGTGGACATCGA 183329 ||| | ||||| |||| || || | |||||| | | ||||||||| || || || || Sbjct 6214792 TTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGTTGCTCCTCCAGTAGATATTGA 6214734 Query 183330 CGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAACATCATCTCTGGTGC 183389 ||| || || |||| ||| ||| || || | ||||||||||| || || |||||||| Sbjct 6214733 CGGTATTCGTGAACTTGTTTCTGAATCTCTACTTTATGGAAACAATATTATTTCTGGTGC 6214674 Query 183390 AGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCATCTGGGAAGCAGCATC 183449 || ||||| |||| || || || | || || || || || |||||||| ||||| Sbjct 6214673 GATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATC 6214614 Query 183450 ACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGTCTTCCACTTCCTCAT 183509 | ||||| ||| | || || || |||||||| | || | || | |||||| | | Sbjct 6214613 CGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACT 6214554 Query 183510 TGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCGTCTCGGTATGCGTCC 183569 ||| || || ||||||||||||||||||||| | || |||| | ||||||| ||| Sbjct 6214553 TGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTATGGGTATGCATCC 6214494 Query 183570 TTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGCTGTCTTCCTGGTCTA 183629 |||||| |||||| ||| || | |||||| || || || |||| ||| || |||| Sbjct 6214493 TTGGATTGTTGTTGCATATTCAGCTCTTGTTGCAGCAGCGACTACTGTTTTCTTGATCTA 6214434 Query 183630 TCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCACCTTTAA 183689 || | |||||||| |||| |||||||||||| || || ||| ||| || || || Sbjct 6214433 CCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAA 6214374 Query 183690 CTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGG 183749 || ||| |||| || | || |||||||||||||| |||||||| ||||||||| | || Sbjct 6214373 CTTCATGATTGTATTATAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGG 6214314 Query 183750 TGTCGCTGGTGTCTTCGGTGGTTCTCT 183776 | ||| |||| || || || || || Sbjct 6214313 CATAGCTTGTGTATTTGGCGGCTCCCT 6214287 >seq3 Length=28715784 Score = 221 bits (244), Expect = 2e-52 Identities = 365/534 (68%), Gaps = 36/534 (7%) Strand=Plus/Minus Query 186476 AGGATTCCACAACTGGACGTTGAATCCATTCCACATGATGGGTGTAGCAGGTATCCTTGG 186535 ||| || || || ||||| ||||| || || || |||||||| || || ||| | | || Sbjct 8270069 AGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGG 8270010 Query 186536 TGGTGCTCTGCTGTCAGCAATCCATGGTGTTACTGTAGAAAATACTCTTTATGAAGATGG 186595 | ||||||||| | || || ||||| | ||| |||||||||||| | | ||||||||| Sbjct 8270009 CGCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGG 8269950 Query 186596 CGAACAAGCAAACACATT--------------CAAAGCATTC-GATA------------- 186627 || ||||||||||| ||| ||| | || | Sbjct 8269949 TGATGGTGCAAACACATTACGTGTTTTTAACCCAACGCAAGCCGAAAACACATTCCGTGC 8269890 Query 186628 --------CGACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTC 186679 | ||||||| ||||||||||||||||||||||| || ||| | || ||||| Sbjct 8269889 TTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTC 8269830 Query 186680 ACAGATCTTCGGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGT 186739 || ||||| || |||| ||| |||||| |||||| | |||||||| ||| | ||||| Sbjct 8269829 TCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 8269770 Query 186740 TCCTGTTATGGGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCG 186799 || || | ||| | |||| | | |||| | | || || || | ||||| || Sbjct 8269769 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCAAAACCTACG 8269710 Query 186800 TGCTTATGACTTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTT 186859 |||||||||||| | || || | | ||||| || |||||||| || ||||| || Sbjct 8269709 TGCTTATGACTTCATTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTTT 8269650 Query 186860 CTATACCAAGAATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCA 186919 ||| || || ||||| || || || || ||| | ||||| |||||||| | ||||| Sbjct 8269649 CTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 8269590 Query 186920 ACCACATGAAAACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973 || ||||||||| || |||| ||||| || || | || | || |||||||| Sbjct 8269589 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 8269536 Score = 132 bits (146), Expect = 6e-26 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 170980 TTGAATGTGCTGAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGA 171039 |||| ||| |||| || ||||||||||||||| |||||||| || ||| ||||| | Sbjct 4033411 TTGAGTGTCCTGATGACACATATATTCTTGATGCAGCTGAAGATGCTGGAATTGATCTCC 4033352 Query 171040 ACTATTCGTGTCGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTG 171099 ||||| || | |||||| |||| || || |||||||||||| ||| ||| || Sbjct 4033351 CATATTCATGCAGGGCTGGTTCTTGCTCTACTTGTGCTGGGAAAGTTGTCTCAGGTAGTG 4033292 Query 171100 TTGATCAATCCGATC-AATCTTTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTG 171158 |||| || || ||| || ||||| |||| |||||||| || || |||||| |||| Sbjct 4033291 TTGACCAGTCAGATGGAAGCTTTC-TTGAGGATGATCAAATAGATGCAGGTTATGTTCTC 4033233 Query 171159 ACCTGCGTCTCATATCCTACAAGTGAT 171185 || || || | ||||||||||||||| Sbjct 4033232 ACTTGTGTTGCTTATCCTACAAGTGAT 4033206 Score = 125 bits (138), Expect = 9e-24 Identities = 214/308 (69%), Gaps = 2/308 (1%) Strand=Plus/Minus Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030 ||||||||||| | | ||||| || || ||||| || |||||||| || | || | Sbjct 8270417 TGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 8270358 Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090 |||| ||| ||| | || | || || ||| | || |||||||| ||||| || | Sbjct 8270357 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTTGTAACTTCAT 8270298 Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTG-AGGGTGCTAATTTTCTCACGGCAGCA 186149 |||||||||| || || || ||| || | | ||| ||| || || | || || ||| Sbjct 8270297 GGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCA 8270239 Query 186150 GTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 186209 || || |||||| || | | | | |||||| | | |||| ||||||| ||| | Sbjct 8270238 GTTTCGACTCCTACTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGTCTTGAAGCA 8270179 Query 186210 CAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCAC 186269 ||||||||| | | ||||||| ||| | || || || |||| |||||| || ||||| Sbjct 8270178 CAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTTTCCAC 8270119 Query 186270 GGAGCCTT 186277 || || || Sbjct 8270118 GGTGCTTT 8270111 Score = 116 bits (128), Expect = 5e-21 Identities = 136/184 (74%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 171002 TATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGTGTCGTGCTGGTGC 171061 |||||||||||||||||||||||| || ||||| | || || || | ||||| || Sbjct 4029983 TATTCTTGATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGGGGC 4029924 Query 171062 TTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAATCCGATCAATCTTT 171121 ||| || ||||| |||||||| ||| | ||| | ||||| || || || ||| || Sbjct 4029923 TTGCTCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTT 4029864 Query 171122 CCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGACCTGCGTCTCATATCCTACAAG 171181 || ||||||||||| |||| | |||||| |||| || || | | ||||| ||||| Sbjct 4029863 TCTGGATGATGATCAAATTGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAG 4029804 Query 171182 TGAT 171185 |||| Sbjct 4029803 TGAT 4029800 >seq20 Length=1106287 Score = 179 bits (198), Expect = 5e-40 Identities = 162/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 183996 CTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATGGTTTTAACTTCAA 184055 |||||| |||||| | ||| ||||||||||||| || ||| | |||||||| || ||||| Sbjct 251040 CTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAA 250981 Query 184056 CCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACACCTGGGCAGACGTTCTCAACCG 184115 ||| || | ||||| ||||||||||||| | || |||||||| || || | || || Sbjct 250980 CCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCG 250921 Query 184116 TGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCT 184175 |||| ||||| |||||||| ||||| || ||||||||||| ||||||||||| ||||| Sbjct 250920 TGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCT 250861 Query 184176 TGCTGCTGCTGAGTCCACTCCTGT 184199 |||||| ||| || || |||| Sbjct 250860 AGCTGCTATTGAAGCCCCTGCTGT 250837 >seq1 Length=28801852 Score = 140 bits (154), Expect = 4e-28 Identities = 193/270 (71%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 186704 CAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTATGGGTCTTTGGACCTC 186763 |||||| |||||| | ||||| || ||| | ||||| || || | ||| | |||| Sbjct 21789383 CAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAG 21789324 Query 186764 TTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGACTTTGTAAGTCAGGA 186823 | | |||| | | || || || || ||||| |||||||||||||| || ||||| Sbjct 21789323 TGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGA 21789264 Query 186824 GGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAGAATATCCTATTGAA 186883 | | ||||| || |||||||| || ||||| ||||| || || ||||| || || || Sbjct 21789263 AATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAA 21789204 Query 186884 TGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATGAAAACTTTGTATTTCC 186943 || ||| | ||||| |||||||| | ||||| || ||||||||| || |||| || Sbjct 21789203 CGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCC 21789144 Query 186944 TGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973 ||| || || | || | || |||||||| Sbjct 21789143 TGAGGAGGTTCTACCCCGTGGAAACGCTCT 21789114 Score = 140 bits (154), Expect = 4e-28 Identities = 193/270 (71%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 186704 CAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTATGGGTCTTTGGACCTC 186763 |||||| |||||| | ||||| || ||| | ||||| || || | ||| | |||| Sbjct 21790570 CAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAG 21790511 Query 186764 TTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGACTTTGTAAGTCAGGA 186823 | | |||| | | || || || || ||||| |||||||||||||| || ||||| Sbjct 21790510 TGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGA 21790451 Query 186824 GGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAGAATATCCTATTGAA 186883 | | ||||| || |||||||| || ||||| ||||| || || ||||| || || || Sbjct 21790450 AATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAA 21790391 Query 186884 TGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATGAAAACTTTGTATTTCC 186943 || ||| | ||||| |||||||| | ||||| || ||||||||| || |||| || Sbjct 21790390 CGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCC 21790331 Query 186944 TGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973 ||| || || | || | || |||||||| Sbjct 21790330 TGAGGAGGTTCTACCCCGTGGAAACGCTCT 21790301 >seq8 Length=22711823 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 170991 GAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGTGT 171050 ||||| || || || || ||||| ||||| ||||||||| | || || |||||| || Sbjct 18100506 GAAGACCAGTACATCCTCGATGCAGCTGAGGAAGCAGGAGTCGACCTGCCCTATTCCTGC 18100447 Query 171051 CGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAATCC 171110 || ||||||||||| ||||| ||||||||||| | | | |||||| ||||| || || Sbjct 18100446 CGCGCTGGTGCTTGCTCGACGTGTGCTGGGAAGTTGGTGTCTGGTTCAGTTGACCAGTCA 18100387 Query 171111 GATCAATCTTTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGACCTGCGTCTCA 171170 ||| || ||||| ||||| |||| || || | |||| | ||||| ||| | ||| Sbjct 18100386 GATGGTTCCTTCCTCGATGACAATCAAATGGAGGCTGGTTATCTGCTGACTTGCATTTCA 18100327 Query 171171 TATCCTACAAGTGATTGTGTAATCTTGACTGAACAGGAAGAGAACCTTTG 171220 || || || ||||| || || | || | ||||||| | ||||| Sbjct 18100326 TACCCGACTTCAGATTGCGTGATTCAGTCTCACAAGGAAGAAGAGCTTTG 18100277 >seq7 Length=32205869 Score = 105 bits (116), Expect = 8e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 171013 CTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGTGTCGTGCTGGTGCTTGTTCGACCT 171072 |||| ||||| | ||| | || | ||| || ||||| |||||||| || || || | Sbjct 17163983 CTGCCGAAGATACCGGAATGGAGCTACCCTACTCATGTCGGGCTGGTGCCTGCTCTACTT 17163924 Query 171073 GTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAATCCGATCAATCTTTCCTTGATGATG 171132 |||||||| | || | || || ||||| ||||| ||| ||| |||||||||||| Sbjct 17163923 GTGCTGGGCAGATGGTTTCAGGCTCCGTTGACCAATCAGATGGATCATTCCTTGATGATA 17163864 Query 171133 ATCAGATTGAATCAGGTTTCATTCTGACCTGCGTCTCATATCCTACAAGTGATTGTGTAA 171192 | ||||| || |||||| | || || ||||| ||||||||||| |||||||||| Sbjct 17163863 AGCAGATGGAGAAAGGTTTTGTGCTTACATGCGTTGCATATCCTACATCGGATTGTGTAA 17163804 Query 171193 T 171193 | Sbjct 17163803 T 17163803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622032733637280