Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq4844 675 0.0 seq2 313 3e-80 seq3 223 4e-53 seq20 167 3e-36 seq1 154 2e-32 seq8 116 4e-21 seq7 96.9 4e-15 >seq4844 Length=160129 Score = 675 bits (748), Expect = 0.0 Identities = 750/995 (75%), Gaps = 4/995 (0%) Strand=Plus/Minus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 |||||||||||| |||| ||| | || || || || | |||||||| ||||| || Sbjct 1523 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 1464 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||| || || |||| ||| | |||||||| Sbjct 1463 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1405 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| || || || ||||| || |||||||| || |||| || || | ||||| ||||| Sbjct 1404 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 1345 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || ||||||||||| || ||||| ||||| ||||| ||| | || || || || || Sbjct 1344 TATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGAT 1285 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896 |||||||| || || | ||||| ||| | |||||||| ||||||| | || || | Sbjct 1284 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 1225 Query 177897 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCG 177956 | |||||| | | ||| | | |||||||||||||||||||||||| || ||| Sbjct 1224 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1165 Query 177957 CCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGC 178016 || ||||||||||| ||||| ||| ||||| || ||||| || || ||||| |||| Sbjct 1164 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGACTGC 1105 Query 178017 TGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTAT 178076 ||| ||| | | || || |||||||||| ||| ||||| | |||||| || || || Sbjct 1104 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 1045 Query 178077 CAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 178136 | ||| || ||||| | |||| |||| ||||| || |||||||||||||| |||||||| Sbjct 1044 CTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 985 Query 178137 CTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGG 178196 ||||||||||| ||||| |||||||| || || || || || |||||||| ||||| || Sbjct 984 ATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 925 Query 178197 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATG 178255 ||| |||| || || | | | | || | |||||||| || || ||| | || | Sbjct 924 TTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGCAG 866 Query 178256 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCG 178315 |||||| ||||||||||| ||||| || || || ||||| |||||||| ||||| || | Sbjct 865 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTG 806 Query 178316 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 178375 | || ||||||||||||| || |||||||| || ||||| | || |||||||| | Sbjct 805 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGG 746 Query 178376 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 178435 | || |||||||| || |||||||||||||||||| | ||| ||||||| ||||| |||| Sbjct 745 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCA 686 Query 178436 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACA 178495 || | || |||||||| |||||||| || | | |||||||| || || | || | Sbjct 685 ACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 626 Query 178496 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATG 178555 ||||||| || || | || |||||| |||||||||||||| ||||| || ||||||| Sbjct 625 CCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 566 Query 178556 CTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAA 178590 |||| ||||||||||| ||||| |||||| |||| Sbjct 565 CTCATAACTTCCCTCTAGACCTAGCTGCTATTGAA 531 Score = 551 bits (610), Expect = 7e-152 Identities = 732/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Plus Query 178839 TTTGATGTACTCGATGACTGGCTTAAGCGTGATCGGTTCGTTTTTGTTGGTTGGTCAGGT 178898 |||||| | | ||||||||| | | | || || ||||||||||| |||||||| || Sbjct 35835 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 35894 Query 178899 CTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACAACATTC 178958 || | || || ||| ||| || | || | || |||||| |||| |||||||| || Sbjct 35895 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTT 35954 Query 178959 GTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAATTTCCTT 179018 || || || |||||||| || || | || ||| ||| | || || || || ||| | Sbjct 35955 GTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGCAACTTCTTA 36014 Query 179019 ACTGCTGCTGTATCAACTCCTGCTGACGCTCTCGGACATTCCCTACTTCTTCTATGGGGT 179078 || || || || || ||||||||| | | | | ||||| | | | ||||||||| Sbjct 36015 ACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGT 36074 Query 179079 CCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGTG 179138 || ||||| || |||||||| |||||| ||| | || || || ||| ||||||| Sbjct 36075 CCTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTT 36134 Query 179139 GCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCGCACG- 179197 || || |||||||| |||| || |||||||||||| | || || |||||| | || || Sbjct 36135 GCTCTACACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGC 36194 Query 179198 TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTGT 179257 ||| || | | || ||||| |||||||| || || |||| |||||||||||| ||||| Sbjct 36195 TCTGTTCAAT-TGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTTGT 36253 Query 179258 GTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTGG 179317 ||||| || || || ||||| || || ||||| |||||||||||||| ||||| Sbjct 36254 TTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGG 36313 Query 179318 AGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCAA 179377 || || ||||| || || ||| | || || | || || || || || ||||| | || Sbjct 36314 TGTAGCGGCGATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAA 36373 Query 179378 CCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCA 179437 ||| || || |||||||| || || ||| | |||||| || |||| ||||||||||| Sbjct 36374 CCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGTGCCATTCA 36433 Query 179438 TGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGC 179497 ||| ||||| ||||| || || | |||||||| |||| |||| |||||| || Sbjct 36434 TGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCGTGC 36493 Query 179498 ATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTC 179557 || | || || |||| || || |||||||||||||| || || ||||| || ||||| Sbjct 36494 TTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTC 36553 Query 179558 TCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGT 179617 ||| |||||||| | || || |||||| |||||| |||||||||||||||| ||||| Sbjct 36554 TCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 36613 Query 179618 TCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTAG 179677 || || | ||| | |||| | |||| | | || || || || ||||| | Sbjct 36614 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACG 36673 Query 179678 AGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTT 179737 ||||||||||| ||||| || || ||| | || || || |||||||| || ||||| || Sbjct 36674 TGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTT 36733 Query 179738 CTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATCA 179797 ||| || || || || || || || || ||| | |||||||||||||| | ||||| Sbjct 36734 CTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 36793 Query 179798 ACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 179851 || ||||||||| || |||| ||||| || || | || | || |||||||| Sbjct 36794 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 36847 >seq2 Length=30838379 Score = 313 bits (346), Expect = 3e-80 Identities = 395/540 (73%), Gaps = 2/540 (0%) Strand=Plus/Minus Query 177640 GGTTGGTTCGGTGTCCTGATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGT 177698 |||||||| ||||| ||||||||||||| | | | || || ||||| || || | Sbjct 6214825 GGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTAT 6214767 Query 177699 CGCTTTCGTCGCTGCTCCTCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTC 177758 ||| ||| | | ||||||||| || || || ||||| || ||||||| || ||| || Sbjct 6214766 CGCCTTCATTGTTGCTCCTCCAGTAGATATTGACGGTATTCGTGAACTTGTTTCTGAATC 6214707 Query 177759 CCTGATGTATGGCAACAACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGG 177818 || | ||||| ||||| || ||||||||||| || ||||| ||||| ||||| || Sbjct 6214706 TCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGG 6214647 Query 177819 TCTCCACTTCTATCCCATCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGG 177878 | | || || || || || |||||||| || || | ||||| ||| | |||||||| || Sbjct 6214646 TTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGG 6214587 Query 177879 TCCTTTCCAACTCGTTATCTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGA 177938 ||||| | || || | | |||||| | | ||| | | |||||||||||||| Sbjct 6214586 TCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGA 6214527 Query 177939 GTGGGAACTTTCTTACCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCC 177998 |||||||||| || ||| | ||||||| ||| ||||| ||| ||||| || |||| Sbjct 6214526 GTGGGAACTTAGTTTCCGTATGGGTATGCATCCTTGGATTGTTGTTGCATATTCAGCTCT 6214467 Query 177999 AGTCGCCGCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGA 178058 || || ||||| || |||| ||| | | || || | |||||||| ||| ||||| Sbjct 6214466 TGTTGCAGCAGCGACTACTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGA 6214407 Query 178059 CGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCA 178118 | |||||| || || ||| ||| || ||||||| |||| |||| || | || ||||| Sbjct 6214406 TGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTATAGGCTGAGCA 6214347 Query 178119 CAACATCCTGATGCACCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCT 178178 ||||||||| |||||||| ||||||||||| ||| | ||| |||| ||||| || || || Sbjct 6214346 CAACATCCTTATGCACCCATTCCACATGTTAGGCATAGCTTGTGTATTTGGCGGCTCCCT 6214287 >seq3 Length=28715784 Score = 223 bits (246), Expect = 4e-53 Identities = 365/533 (68%), Gaps = 36/533 (7%) Strand=Plus/Minus Query 179355 GGCTTCCACAACTGGACGCTCAACCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGC 179414 || || || || ||||| | ||||| || || |||||||| || || ||| | ||||| Sbjct 8270068 GGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGC 8270009 Query 179415 GGAGCATTGCTTTGTGCCATTCATGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGT 179474 | || |||| |||||||||||||| ||||| ||||| || || | |||||||| || Sbjct 8270008 GCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGGT 8269949 Query 179475 GACCAATCAAATACATT-------------------CAAGGC--------ATTCG----- 179502 || |||| ||||| |||| | |||| Sbjct 8269948 GATGGTGCAAACACATTACGTGTTTTTAACCCAACGCAAGCCGAAAACACATTCCGTGCT 8269889 Query 179503 ----AGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTCT 179558 | || || |||| || || |||||||||||||| || || ||||| || |||||| Sbjct 8269888 TTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTCT 8269829 Query 179559 CAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGTT 179618 || |||||||| | || || |||||| |||||| |||||||||||||||| ||||| Sbjct 8269828 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 8269769 Query 179619 CCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTAGA 179678 || || | ||| | |||| | |||| | | || || || | ||||| | Sbjct 8269768 CCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCAAAACCTACGT 8269709 Query 179679 GCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTTC 179738 ||||||||||| |||| ||||| ||| | || || || |||||||| || ||||| ||| Sbjct 8269708 GCTTATGACTTCATTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTTTC 8269649 Query 179739 TATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATCAA 179798 || || || || || || || || || ||| | |||||||||||||| | ||||| Sbjct 8269648 TACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAG 8269589 Query 179799 CCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 179851 || ||||||||| || |||| ||||| || || | || | || |||||||| Sbjct 8269588 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 8269536 Score = 141 bits (156), Expect = 1e-28 Identities = 222/318 (70%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 178839 TTTGATGTACTCGATGACTGGCTTAAGCGTGATCGGTTCGTTTTTGTTGGTTGGTCAGGT 178898 |||||| | | ||||||||| | | | || || ||||||||||| |||||||| || Sbjct 8270427 TTTGATATTATGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGC 8270368 Query 178899 CTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACAACATTC 178958 || | || || ||| ||| || | || | || |||||| |||| |||||||| || Sbjct 8270367 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTT 8270308 Query 178959 GTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAATTTCCTT 179018 || || || |||||||| || || | || ||| ||| | || || || || ||| | Sbjct 8270307 GTAACTTCATGGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGCAACTTCTTA 8270248 Query 179019 ACTGCTGCTGTATCAACTCCTGCTGACGCTCTCGGACATTCCCTACTTCTTCTATGGGGT 179078 || || || || || |||||| || | | | | ||||| | | | ||||||||| Sbjct 8270247 ACCGCCGCAGTTTCGACTCCTACTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGT 8270188 Query 179079 CCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGTG 179138 | ||||| || |||||||| |||||| ||| | || || || ||| ||||||| Sbjct 8270187 CTTGAAGCACAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTT 8270128 Query 179139 GCGCTCCACGGTGCCTTC 179156 || |||||||||| ||| Sbjct 8270127 GCTTTCCACGGTGCTTTC 8270110 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 176157 TGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTAC 176216 ||| |||| || || |||||| ||||||||||| ||||| || |||| || ||| Sbjct 4030000 TGTCCTGATGACTCGTTTATTCTTGATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTAC 4029941 Query 176217 TCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGAT 176276 || ||| | ||||| || || || ||| | || ||| | | || || || || || Sbjct 4029940 TCATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGAC 4029881 Query 176277 CAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGT 176336 || || ||| || || |||||||| || || | | |||||| |||| |||||| Sbjct 4029880 CAGTCGGAGCAAAGCTTTCTGGATGATGATCAAATTGGAGAAGGTTTTGTTCTCACTTGT 4029821 Query 176337 GTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACT 176389 | | | ||||| || || ||| | || |||||| | || |||||||| || Sbjct 4029820 GCTGCTTATCCAACAAGTGATGTTACTATAGAGACTCACAAGGAAGAGGAGCT 4029768 >seq20 Length=1106287 Score = 167 bits (184), Expect = 3e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 178395 TATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTT 178454 || ||||||||||||| | ||| ||||||| ||||| |||||| | || |||||||| || Sbjct 251043 TAACTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTT 250984 Query 178455 CAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAA 178514 |||||| || | | |||||||| || || | || |||||||| || || | || Sbjct 250983 CAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAA 250924 Query 178515 CCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTGA 178574 |||||| |||||||||||||| ||||| || ||||||||||| ||||||||||| || Sbjct 250923 TCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 250864 Query 178575 CCTCGCTGCTGCTGAAAGCACTCCTGT 178601 ||| |||||| |||| | || |||| Sbjct 250863 CCTAGCTGCTATTGAAGCCCCTGCTGT 250837 >seq1 Length=28801852 Score = 154 bits (170), Expect = 2e-32 Identities = 196/270 (73%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 179582 CAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGACCTC 179641 |||||| |||||| ||||||| |||||||| ||||| || || | ||| | |||| Sbjct 21789383 CAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAG 21789324 Query 179642 TAGCATTGGTATTATTGGTCTTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGA 179701 | |||| | | || || || || ||||| | ||||||||||| ||||| || || Sbjct 21789323 TGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGA 21789264 Query 179702 GATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAA 179761 ||| | || || || |||||||| || ||||| ||||| || || || || || || || Sbjct 21789263 AATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAA 21789204 Query 179762 TGAAGGTCTACGTGCTTGGATGGCACCAGTCGATCAACCACATGAAAACTTTGTATTTCC 179821 || ||| | |||||||||||||| | ||||| || ||||||||| || |||| || Sbjct 21789203 CGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCC 21789144 Query 179822 TGAAGAAGTATTGCCAAGAGGCAACGCTCT 179851 ||| || || | || | || |||||||| Sbjct 21789143 TGAGGAGGTTCTACCCCGTGGAAACGCTCT 21789114 Score = 154 bits (170), Expect = 2e-32 Identities = 196/270 (73%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 179582 CAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGACCTC 179641 |||||| |||||| ||||||| |||||||| ||||| || || | ||| | |||| Sbjct 21790570 CAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAG 21790511 Query 179642 TAGCATTGGTATTATTGGTCTTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGA 179701 | |||| | | || || || || ||||| | ||||||||||| ||||| || || Sbjct 21790510 TGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGA 21790451 Query 179702 GATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAA 179761 ||| | || || || |||||||| || ||||| ||||| || || || || || || || Sbjct 21790450 AATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAA 21790391 Query 179762 TGAAGGTCTACGTGCTTGGATGGCACCAGTCGATCAACCACATGAAAACTTTGTATTTCC 179821 || ||| | |||||||||||||| | ||||| || ||||||||| || |||| || Sbjct 21790390 CGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCC 21790331 Query 179822 TGAAGAAGTATTGCCAAGAGGCAACGCTCT 179851 ||| || || | || | || |||||||| Sbjct 21790330 TGAGGAGGTTCTACCCCGTGGAAACGCTCT 21790301 Score = 98.7 bits (108), Expect = 1e-15 Identities = 209/313 (67%), Gaps = 18/313 (6%) Strand=Plus/Minus Query 178084 ACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCAC 178143 || ||||||| |||| |||| ||||| || ||||||| ||| || |||| | |||||| Sbjct 20504926 ACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAGCATTCTTGTGCATTCATTCCAC 20504867 Query 178144 ATGTT-------GGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGG 178196 ||||| ||| | ||||||| ||||| ||||| || |||||||| Sbjct 20504866 ATGTTATGACTAAGGCTTAGCTGGTGCGTTTGGCGGTTCCCT----------ATGCACGG 20504817 Query 178197 TTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACCACCGAGAACGAAAGTCAGAACTATGG 178256 || |||| || || || | || |||||||| || || ||| || || | | Sbjct 20504816 TTACTTGGTAACCTCTAGTTTGATCCGGGAAACCACAGAAAATGAATCTCCCAAGGAAAG 20504757 Query 178257 TTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGG 178316 |||| || |||| ||| || || || ||| | || || ||||||||| ||| || || Sbjct 20504756 ATACAGATTTGGTCCAGAGGAGGAAACTTACGATATTGTATCTGCTCATGTTTATTTTGG 20504697 Query 178317 TCGCCTGAT-CTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 178375 |||| ||||| ||| || ||| ||| || | ||| | || |||||||| | Sbjct 20504696 CTTATTGATACTTCCGATATGCTGGTTTCCGCAATTCTCATTCTTTACATTTCTTCCTAG 20504637 Query 178376 CAGCATGGCCTGT 178388 || ||||||| Sbjct 20504636 ATGCTGGGCCTGT 20504624 >seq8 Length=22711823 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 176163 GACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCGTGC 176222 || || ||||| || || ||||| ||||||||||||||||| || || ||| || ||| Sbjct 18100506 GAAGACCAGTACATCCTCGATGCAGCTGAGGAAGCAGGAGTCGACCTGCCCTATTCCTGC 18100447 Query 176223 CGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGATCAAAGC 176282 ||||||||||| || |||| ||||| || || | | || || | || || || Sbjct 18100446 CGCGCTGGTGCTTGCTCGACGTGTGCTGGGAAGTTGGTGTCTGGTTCAGTTGACCAGTCA 18100387 Query 176283 GATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGTGTTTCA 176342 ||| || ||||| ||||| | || || || || |||| | |||||||| ||||| Sbjct 18100386 GATGGTTCCTTCCTCGATGACAATCAAATGGAGGCTGGTTATCTGCTGACTTGCATTTCA 18100327 Query 176343 TATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACTTT 176391 || || || ||||| |||||| || || | || ||||| || |||| Sbjct 18100326 TACCCGACTTCAGATTGCGTGATTCAGTCTCACAAGGAAGAAGAGCTTT 18100278 >seq7 Length=32205869 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 176163 GACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCGTGC 176222 |||||| || || || || ||||||| || || ||| | || ||| |||||| ||| Sbjct 17161973 GACGATGCTTACATCCTCGACTCTGCTGAAGATGCCGGAATGGAGCTCCCCTACTCATGC 17161914 Query 176223 CGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGATCAAAGC 176282 |||||||||||||| || | ||| || || | | || ||| | || || ||| Sbjct 17161913 CGCGCTGGTGCCTGCTCTACTTGCGCTGGCCTGATGGTTTCAGGCTCTGTTGACCAATCA 17161854 Query 176283 GATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGTGTTTCA 176342 ||| ||| |||||||||||| ||||||| || ||||| | || || || || || Sbjct 17161853 GATGGATCATTCCTTGATGATAACCAGATGGAGAAAGGTTATGTCCTTACATGCATTGCA 17161794 Query 176343 TATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACTT 176390 ||||| | |||||||||||| | || | || ||| |||||| Sbjct 17161793 TATCCAAAATCAGATTGTGTGATTTATACACACAAGGAATCTGAACTT 17161746 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 176185 CTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCGTGCCGCGCTGGTGCCTGTTCGAGTT 176244 |||| || || | ||| | || || |||||| || || ||||||||||| || | || Sbjct 17163983 CTGCCGAAGATACCGGAATGGAGCTACCCTACTCATGTCGGGCTGGTGCCTGCTCTACTT 17163924 Query 176245 GTGCAGGAAAACTCATCTCGGGCACGGTAGATCAAAGCGATCAATCGTTCCTTGATGATG 176304 |||| || | | | || ||| | || || ||| ||| ||| |||||||||||| Sbjct 17163923 GTGCTGGGCAGATGGTTTCAGGCTCCGTTGACCAATCAGATGGATCATTCCTTGATGATA 17163864 Query 176305 ACCAGATCGATGCAGGTTTCATTCTGACTTGTGTTTCATATCCTACGAGCGATTGTGTGA 176364 | ||||| || |||||| | || || || ||| |||||||||| |||||||| | Sbjct 17163863 AGCAGATGGAGAAAGGTTTTGTGCTTACATGCGTTGCATATCCTACATCGGATTGTGTAA 17163804 Query 176365 TTGAGACTGAGAAAGAAGAGGAACTTTATTGA 176396 || | || | || ||| |||||||| ||| Sbjct 17163803 TTTACACACACAAGGAATCTGAACTTTACTGA 17163772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596271093599040