Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq4844 630 8e-176 seq2 300 2e-76 seq3 248 1e-60 seq20 156 5e-33 seq8 93.3 5e-14 >seq4844 Length=160129 Score = 630 bits (698), Expect = 8e-176 Identities = 732/987 (74%), Gaps = 0/987 (0%) Strand=Plus/Minus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 |||||||||||| |||| |||||| ||||| || || | |||||||| || || || Sbjct 1523 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 1464 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471 |||||||| | || | ||||| || || || ||||||||||| | |||||| Sbjct 1463 ATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCT 1404 Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531 || || || || ||||| || || ||||| ||| |||| ||||| | ||||| ||||| Sbjct 1403 CCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAAT 1344 Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591 || || |||||||| || | || |||| || || ||| | || || || || || Sbjct 1343 ATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGATA 1284 Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651 |||||||| ||| | ||||||||||| ||||| || ||||||| | || |||| Sbjct 1283 TGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 1224 Query 169652 TTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGT 169711 | |||||| | | || | | |||||||||||||||||||||| | | ||| Sbjct 1223 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1164 Query 169712 CTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCT 169771 ||||||||||| |||||||| |||||| || || ||||| ||||| ||||| | ||| Sbjct 1163 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGACTGCT 1104 Query 169772 GTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATC 169831 |||||| || ||||||| | || ||||| || ||||| | ||||||||| || ||| Sbjct 1103 GTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 1044 Query 169832 TCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCC 169891 || || || || || | |||| | || ||||| ||||||||||||||||| |||||||| Sbjct 1043 TCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 984 Query 169892 TTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGT 169951 ||||||||| | || || || || || || || || || || || || || ||||| ||| Sbjct 983 TTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 924 Query 169952 AGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGT 170011 | | || || || ||| | || | |||||||| || || || || || ||| Sbjct 923 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGCAGGT 864 Query 170012 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGT 170071 |||| ||||||||||| ||||| || || || ||||| || ||||||||||| || || Sbjct 863 TACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGC 804 Query 170072 CGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCA 170131 || ||||||||||||| ||| |||||||| || ||||| | || |||||||| || Sbjct 803 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCT 744 Query 170132 GCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAAC 170191 || |||||||| || || ||||||||||| ||| | ||| | ||| ||||| |||||| Sbjct 743 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAAC 684 Query 170192 CTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACC 170251 | || |||||||| |||||||| || | | ||| |||| |||||||| | || ||| Sbjct 683 TTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC 624 Query 170252 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCT 170311 ||||| || || | || |||||| ||||| |||||||| ||||| || ||||||||| Sbjct 623 TGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 564 Query 170312 CACAACTTCCCTCTCGACCTCGCTGCT 170338 || ||||||||||| ||||| |||||| Sbjct 563 CATAACTTCCCTCTAGACCTAGCTGCT 537 Score = 531 bits (588), Expect = 6e-146 Identities = 727/1010 (72%), Gaps = 4/1010 (0%) Strand=Plus/Plus Query 170605 TGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGGTCTGGACTTCTTCTTT 170664 ||||||||||| | | || || || || ||||| || |||||||| || | || | Sbjct 35845 TGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 35904 Query 170665 TTCCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCACGACATTTGTTACAAGTT 170724 |||| ||| ||| | || | || || ||| | || ||||| || ||||| || | Sbjct 35905 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTTGTAACTTCAT 35964 Query 170725 GGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGG-TGCTAATTTCCTTACAGCGGCT 170783 |||| ||||| ||| | || ||||| || | ||||| ||| || ||| | || || || Sbjct 35965 GGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCA 36023 Query 170784 GTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 170843 || || || |||||| || | | | |||||| | | |||| ||||||||||| | Sbjct 36024 GTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCA 36083 Query 170844 CAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCAC 170903 || || ||||| ||||||| ||| | || || || |||| |||||| || || ||| Sbjct 36084 CAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTACAC 36143 Query 170904 GGAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCAGTCGTCTCGTAGGG 170963 || || || | || |||||||||||| | || || |||||| | ||| ||| Sbjct 36144 GGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG-CTCTGTTCA 36202 Query 170964 ATTA-GACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGTT 171022 ||| |||| || |||||||| || ||||||| ||| || ||||| ||||| || || Sbjct 36203 ATTGCGACCTTATAATGCAATAGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATT 36262 Query 171023 CCTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGC 171082 ||| || ||||| || || ||||| |||||||||| || ||| ||||| || || || Sbjct 36263 CCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGC 36322 Query 171083 AATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTCA 171142 || || || ||| | || || | ||||| || || || |||||| |||| || ||||| Sbjct 36323 GATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCA 36382 Query 171143 TATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTAC 171202 ||||||||| ||||| ||| | | |||| ||| |||| | ||| |||||||| | ||| Sbjct 36383 TATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGTGCCATTCATGGCGCTAC 36442 Query 171203 AGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACAC 171262 ||||| |||||||| | ||||||||||||| |||||||| || || ||| || | Sbjct 36443 CGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCC 36502 Query 171263 GACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATTTT 171322 || || | ||||| || ||||| |||||||| ||||| || || ||||| || || || Sbjct 36503 AACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTT 36562 Query 171323 TGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCAT 171382 ||| | || || |||||| |||||||| |||||||||||| | ||||| || || | Sbjct 36563 TGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAAC 36622 Query 171383 GGGTCTTTGGGTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTAATCTTAGGGCTTATGA 171442 ||| | ||| | ||| ||| || | | || || || || || || | |||||||| Sbjct 36623 CGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGA 36682 Query 171443 TTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTCGAGACGTTCTATACCAA 171502 ||||| ||||| || | ||||| |||||||| || || ||||| ||||| || || Sbjct 36683 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAA 36742 Query 171503 GAACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCAGTAGACCAACCACATGA 171562 || || || || || || ||| ||||||| |||||||| | ||| || || ||||| Sbjct 36743 AAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 36802 Query 171563 AAACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCACTTTGAT 171612 |||| || | ||||| ||||| |||||||| ||||| || || |||| || Sbjct 36803 AAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 36852 >seq2 Length=30838379 Score = 300 bits (332), Expect = 2e-76 Identities = 408/569 (72%), Gaps = 0/569 (0%) Strand=Plus/Minus Query 169364 GTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTGATGATCCCCTGC 169423 ||||| |||||| ||||| || || | |||||||| || || |||||||||| Sbjct 6214855 GTAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACT 6214796 Query 169424 CTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCCCCTGTGGACATC 169483 | || | ||||| || || || ||||||||||| | |||||| || || || || Sbjct 6214795 TTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGTTGCTCCTCCAGTAGATATT 6214736 Query 169484 GACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAACATCATCTCTGGT 169543 ||||| || || |||| ||| ||| ||||| | ||||| ||||| || || |||||| Sbjct 6214735 GACGGTATTCGTGAACTTGTTTCTGAATCTCTACTTTATGGAAACAATATTATTTCTGGT 6214676 Query 169544 GCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATCTGGGAAGCAGCA 169603 || || | || |||| || || ||| | || || || || || |||||||| ||| Sbjct 6214675 GCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCA 6214616 Query 169604 AGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTCCTC 169663 | ||||||||||| ||||| || ||||||| | || |||| | |||||| | Sbjct 6214615 TCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTA 6214556 Query 169664 ATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGTCTGGGTATGCGC 169723 | || | | |||||||||||||||||||||| | | ||| ||||||||| Sbjct 6214555 CTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTATGGGTATGCAT 6214496 Query 169724 CCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCTGTTTTCCTGGTC 169783 |||||||| |||||| || || |||| ||||| ||||| | |||||||| || || Sbjct 6214495 CCTTGGATTGTTGTTGCATATTCAGCTCTTGTTGCAGCAGCGACTACTGTTTTCTTGATC 6214436 Query 169784 TACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATCTCGGGAACCTTT 169843 ||||| |||| ||||| || ||||| | ||||||||| || ||||| || || || Sbjct 6214435 TACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTC 6214376 Query 169844 AACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCCTTCCACATGCTT 169903 |||| |||| | || || | ||||||||||||||||| |||||||| ||||||||| | Sbjct 6214375 AACTTCATGATTGTATTATAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTA 6214316 Query 169904 GGTGTTGCGGGAGTGTTTGGTGGGTCTCT 169932 || | || | || ||||| || || || Sbjct 6214315 GGCATAGCTTGTGTATTTGGCGGCTCCCT 6214287 >seq3 Length=28715784 Score = 248 bits (274), Expect = 1e-60 Identities = 373/539 (69%), Gaps = 36/539 (7%) Strand=Plus/Minus Query 171110 AGGTTTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGG 171169 ||| || || || |||||| |||| || |||||||||||||| ||||| ||| | | || Sbjct 8270069 AGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGG 8270010 Query 171170 CGGTGCATTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGG 171229 || ||| |||| | ||| |||||||| | ||| ||||| |||||||| | ||||||||| Sbjct 8270009 CGCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGG 8269950 Query 171230 TGATCAAGCAAACACCTTT-------------------AAG-----------------GC 171253 |||| |||||||| || ||| || Sbjct 8269949 TGATGGTGCAAACACATTACGTGTTTTTAACCCAACGCAAGCCGAAAACACATTCCGTGC 8269890 Query 171254 ATTTGACACGACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTCTGGTC 171313 ||| || | || || | ||||| || ||||| |||||||| ||||| || || ||||| Sbjct 8269889 TTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTC 8269830 Query 171314 GCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGT 171373 || || ||||| | || || |||||| |||||||| |||||||||||| | ||||| Sbjct 8269829 TCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 8269770 Query 171374 TCCTGTCATGGGTCTTTGGGTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTAATCTTAG 171433 || || | ||| | ||| | ||| ||| || | | || || || | || || | Sbjct 8269769 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCAAAACCTACG 8269710 Query 171434 GGCTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTCGAGACGTT 171493 |||||||| ||| | || || || | ||||| |||||||| || || ||||| || Sbjct 8269709 TGCTTATGACTTCATTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTTT 8269650 Query 171494 CTATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCAGTAGACCA 171553 ||| || || || || || || || || ||| ||||||| |||||||| | ||| || Sbjct 8269649 CTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 8269590 Query 171554 ACCACATGAAAACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCACTTTGAT 171612 || ||||||||| || | ||||| ||||| |||||||| ||||| || || |||| || Sbjct 8269589 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 8269531 Score = 116 bits (128), Expect = 4e-21 Identities = 212/308 (69%), Gaps = 2/308 (1%) Strand=Plus/Minus Query 170605 TGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGGTCTGGACTTCTTCTTT 170664 ||||||||||| | | || || || || ||||| || |||||||| || | || | Sbjct 8270417 TGGATGACTGGTTACGGAGGGACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 8270358 Query 170665 TTCCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCACGACATTTGTTACAAGTT 170724 |||| ||| ||| | || | || || ||| | || ||||| || ||||| || | Sbjct 8270357 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGCACAACCTTTGTAACTTCAT 8270298 Query 170725 GGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGG-TGCTAATTTCCTTACAGCGGCT 170783 |||| ||||| ||| | || ||||| || | ||||| ||| || ||| | || || || Sbjct 8270297 GGTATACCCATGGATTAGCCAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCA 8270239 Query 170784 GTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 170843 || || || ||| || || | | | |||||| | | |||| ||||||| ||| | Sbjct 8270238 GTTTCGACTCCTACTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGTCTTGAAGCA 8270179 Query 170844 CAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCAC 170903 || || ||||| ||||||| ||| | || || || |||| |||||| || ||||| Sbjct 8270178 CAAGGAGATTTTACTCGCTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTTTCCAC 8270119 Query 170904 GGAGCCTT 170911 || || || Sbjct 8270118 GGTGCTTT 8270111 Score = 89.7 bits (98), Expect = 6e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 167451 ATCCTTGACGCGGCTGAGGAAGCGGGTGTGGACATCAACTACTCGTGCCGTGCAGGCGCT 167510 || ||||| || ||||| ||||| || | || | ||||| ||| | || || ||| Sbjct 4029982 ATTCTTGATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGGGGCT 4029923 Query 167511 TGTTCGTCGTGCGCGGGAAAACTCATCTCTGGCACCGTAGATCAAAGCGATCAATCCTTC 167570 || || || || | || ||| | | ||||| ||||| || || || ||| ||| Sbjct 4029922 TGCTCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTT 4029863 Query 167571 CTGGACGATGATCAAATTGCCGAAGGTTTCCTTCTCACCTGTGTGTCCTATCCAACCAGC 167630 ||||| ||||||||||||| |||||||| ||||||| |||| | |||||||| || Sbjct 4029862 CTGGATGATGATCAAATTGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGT 4029803 Query 167631 GA 167632 || Sbjct 4029802 GA 4029801 >seq20 Length=1106287 Score = 156 bits (172), Expect = 5e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 170152 CTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAACCTGAACGGTTTCAACTTCAA 170211 ||||||||| ||| | ||| | ||| ||||| |||||| | || |||||||| ||||| Sbjct 251040 CTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAA 250981 Query 170212 CCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCG 170271 ||| || | | ||| |||| |||||||| | || |||||||| || || | || || Sbjct 250980 CCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCG 250921 Query 170272 TGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCT 170331 |||| ||||| |||||||| ||||| || ||||||||||| ||||||||||| ||||| Sbjct 250920 TGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCT 250861 Query 170332 CGCTGCTGCTGAGTCCACTCCTGT 170355 |||||| ||| || || |||| Sbjct 250860 AGCTGCTATTGAAGCCCCTGCTGT 250837 >seq8 Length=22711823 Score = 93.3 bits (102), Expect = 5e-14 Identities = 141/199 (71%), Gaps = 5/199 (3%) Strand=Plus/Minus Query 171040 GGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAATCTTCCGCTTCCTGC 171099 || |||| ||| |||||| || ||| ||||| || | ||||| || || ||| | | Sbjct 6304524 GGAAGTCTTGTTAGTTCTTTGCGCCTAGTTTTGGTGTAGTGGCAATATTACGGTTCATCC 6304465 Query 171100 T-CTTCCTG----CAAGGTTTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGT 171154 | |||| | ||||| | | || |||||| |||| || |||||||||||||| || Sbjct 6304464 TTCTTCTTTTTTTCAAGGGTCTTATAAGTGGACATTGAACCCCTTTCATATGATGGGAGT 6304405 Query 171155 TGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATAC 171214 ||| || | | |||| ||| |||| | ||| |||||| | | ||| |||| ||||| Sbjct 6304404 TGCCTGTGTATTGGGCGCTGCTCTGCTATGTGCTATTCATAGCGCTACTATAGAAAATAC 6304345 Query 171215 TTTGTATGAAGATGGTGAT 171233 || | ||| |||| |||| Sbjct 6304344 TTAATTTGAGGATGATGAT 6304326 Score = 82.4 bits (90), Expect = 9e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 171049 GTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTTCCTGC 171108 |||| ||||| | ||| ||||| || | | || || || ||| | || || | | Sbjct 5468307 GTTGATTCTTTGAGCCTCGTTTTGGTGTAGTGACGATATTTCGGTTCATCCTTTTTTTCC 5468366 Query 171109 AAGGTTTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCG 171168 |||| | | || | |||| | ||||| |||||||||||||| ||||| ||| | | | Sbjct 5468367 AAGGGTCTTATAAGTAGACATTAAATCCCTTTCATATGATGGGAGTTGCTGGTGTATTAG 5468426 Query 171169 GCGGTGCATTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATG 171228 | | || ||| | ||| |||||||| ||| |||| |||||||| | |||||||| Sbjct 5468427 GTGATGTTCAGCTATGTGCTATTCATGGCACTACTATAGAAAATACTTTATTTGAAGATG 5468486 Query 171229 GTGAT 171233 |||| Sbjct 5468487 CTGAT 5468491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592162542386880