Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq25 167 2e-36 seq6 134 1e-26 seq7 120 3e-22 seq8 116 3e-21 seq4 114 1e-20 seq4831 113 4e-20 seq3 107 2e-18 seq1 105 6e-18 seq3654 98.7 9e-16 >seq25 Length=987425 Score = 167 bits (184), Expect = 2e-36 Identities = 177/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| ||||| || ||||||||| || || ||||||| Sbjct 697606 CCACCACGAAGCCGAAGCACCAGGTGCAGAGTCGACTCCTTCTGGATATTGTAGTCGGCC 697547 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| ||| |||| |||||||||||||||||||| || |||||||| ||||||| || Sbjct 697546 AAGGTTCGCCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGG 697487 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || | || || | ||| | | | |||||| |||||||| Sbjct 697486 ATGCCCTCCTTGTCC-TGGATCTTCGCCTTGACGTTGTCGATTGTGTCGGAGGACTCCAC 697428 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| |||||| || |||||||| || || || ||||| |||||||| || Sbjct 697427 CTCCAACGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 697377 >seq6 Length=21175815 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| |||||| |||||||| || |||| | Sbjct 12931852 CCACCACGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCG 12931911 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || |||||||||||||||||||| || || | ||| ||||||| ||| Sbjct 12931912 AGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 12931971 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||| |||||| ||| || |||| ||| | | | |||||| |||||| Sbjct 12931972 ATCCCCTCTTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATCGTGTCGGAGCTCTCCAC 12932030 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| || || |||| |||||| ||||| |||||||| Sbjct 12932031 CTCCAGGGTAATCGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCAT 12932078 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | || ||||| || || ||||||||| ||||| || |||| Sbjct 5234370 GCCTCCGCGGAGACGAAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTGTAATCGGC 5234311 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| | || ||||||||||| || ||||| || || | ||| ||||||| ||| Sbjct 5234310 CAAGGTGCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGGGG 5234251 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||| | ||| | || || | ||| | | | |||||| ||| | Sbjct 5234250 GATTCCCTCCTTGT-CTTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGA 5234192 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || | || || ||||| || ||||| || || ||||| ||||||||| Sbjct 5234191 CTTCGAGAGTAATAGTTTTGCCAGTCAGGGTTTTCACGAAGATCTGCATG 5234142 Score = 107 bits (118), Expect = 2e-18 Identities = 167/232 (72%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| | ||||| ||||||||||| || || ||||||||||||||| || || | Sbjct 5317173 CCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGCA 5317114 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 || || | | || || |||||||| || || || ||||||||||| || || | ||| Sbjct 5317113 AGCGTCCTTCCATCCTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGG 5317054 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | || || || ||| || ||||||| | ||| | | | ||||| ||| || Sbjct 5317053 ATCCCT-TCTTTATCC-TGGATTTTTGCCTTGACGTTGTCAATGGTGTCAGAGCT---CT 5316999 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || |||| || ||||| || |||||||| || || ||||| |||||||| Sbjct 5316998 CGACTTCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCAT 5316947 Score = 107 bits (118), Expect = 2e-18 Identities = 167/232 (72%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| | ||||| ||||||||||| || || ||||||||||||||| || || | Sbjct 5335890 CCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGCA 5335831 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 || || | | || || |||||||| || || || ||||||||||| || || | ||| Sbjct 5335830 AGCGTCCTTCCATCCTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGG 5335771 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | || || || ||| || ||||||| | ||| | | | ||||| ||| || Sbjct 5335770 ATCCCT-TCTTTATCC-TGGATTTTTGCCTTGACGTTGTCAATGGTGTCAGAGCT---CT 5335716 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || |||| || ||||| || |||||||| || || ||||| |||||||| Sbjct 5335715 CGACTTCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCAT 5335664 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || ||||| || || |||||| |||||||| |||||||| |||| |||||||| Sbjct 12932089 AGGCGCAACACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGCCAGGGTGCGG 12932148 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || ||||||||||||||||| || || | ||| ||||||| ||| | | ||| Sbjct 12932149 CCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCTTCC 12932208 Query 41765 TTGTCCATGATTTTTTG 41781 |||||| ||| || || Sbjct 12932209 TTGTCCTGGATCTTCTG 12932225 Score = 105 bits (116), Expect = 6e-18 Identities = 167/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||| | || ||||| || ||| ||||||||||||||| || || Sbjct 4449337 ACCACCACCTCGGAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTGTAATC 4449396 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CG 41750 | || || ||| |||| || |||||||| || ||||| || || | ||| || || | Sbjct 4449397 AGCCAGAGTACGCCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGG 4449456 Query 41751 CGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGAC 41809 |||| | || ||||||||| ||| | || |||| || | | | || || | Sbjct 4449457 TGGGATCCCT-TCCTTGTCC-TGAATCTTGGCTTTGACATTGTCAATGGTATCAGAACTC 4449514 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||||| || ||||| || || |||| ||||| || |||||||||||| Sbjct 4449515 TCTACCTCCAGGGTAATCGTCTTCCCGGTCAATGTCTTAACAAAAATCTGCATG 4449568 Score = 105 bits (116), Expect = 6e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| || |||||||| || || |||||||||||||| || || | ||| || | Sbjct 4449578 AGACGCAAAACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCGAGCGTCCTT 4449637 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| ||||| |||| ||||| ||||||| |||| | ||| Sbjct 4449638 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCTTCC 4449697 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| || | || || | ||| | | | |||||| ||| || || | || Sbjct 4449698 TTGTCC-TGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCGACTTCGAGGGT 4449756 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || ||||| || || || ||||| ||||||||| Sbjct 4449757 AATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCATG 4449796 Score = 102 bits (112), Expect = 8e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | || ||||| || || ||||||||| ||||| || |||| Sbjct 5234142 GCCTCCGCGGAGACGAAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGC 5234083 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| |||| ||||||||||| || || || || || | ||| ||||||| || Sbjct 5234082 CAAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCGG 5234023 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 || | |||||||| | || | || || | ||| | | | ||||| ||| || Sbjct 5234022 AATTCCCTCCTTGT-CTTGGATCTTGGCCTTTACGTTGTCGATGGTGTCCGAGCT---CT 5233967 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || | || || ||||| || |||| || || ||||| |||||||| Sbjct 5233966 CGACTTCGAGAGTAATAGTTTTTCCGGTCAAGGTTTTCACGAAGATCTGCAT 5233915 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| ||||| || ||| |||||||||||||||||| || | Sbjct 5235281 CCACCACGAAGGCGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCT 5235222 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || |||||||| || || || || || | ||| || || | ||| Sbjct 5235221 AAAGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGA 5235162 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | ||||||||| ||| | ||||| | ||| | | ||| || ||| ||| Sbjct 5235161 ATCCCTTCCTTGTCC-TGAATCTTTGCCTTAACATTATCAATAGTATCTGAGCT---CTC 5235106 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || || || || |||| ||||| || || |||||||| Sbjct 5235105 CACCTCCAGAGTAATAGTCTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 5235055 >seq7 Length=32205869 Score = 120 bits (132), Expect = 3e-22 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || ||||| | || || || || || |||||| || ||||| ||||||| Sbjct 5584855 CGCCACCACGGAGACGGAGGACGAGGTGGAGTGTTGACTCCTTTTGGATGTTGTAGTCGG 5584914 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||||| | |||| ||||||||||| |||||||| || || ||||| ||||||| | Sbjct 5584915 CTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTG 5584974 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTC 41811 ||| | |||||||||| ||| || ||| || | || | ||||| || || Sbjct 5584975 GAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCCGATGATTC 5585032 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| | ||||| || || ||||| || || || ||||| ||||||||| Sbjct 5585033 GACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCACGAAGATCTGCATG 5585084 >seq8 Length=22711823 Score = 116 bits (128), Expect = 3e-21 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || || || | || || || || || |||||| || ||||| ||||||| Sbjct 18948012 CGCCACCACGGAGGCGGAGGACGAGGTGGAGTGTTGACTCCTTTTGGATGTTGTAGTCGG 18948071 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||||| | |||| ||||||||||| |||||||| || || ||||| ||||||| | Sbjct 18948072 CTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTG 18948131 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTC 41811 ||| | |||||||||| ||| || ||| || | || | ||||| || || Sbjct 18948132 GAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCCGATGATTC 18948189 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| | ||||| || || ||||| || || || ||||| ||||||||| Sbjct 18948190 GACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTCACGAAGATCTGCATG 18948241 >seq4 Length=19951838 Score = 114 bits (126), Expect = 1e-20 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | |||||| | ||||| || || ||| ||||||||||||||||||||||| Sbjct 7827780 CCACCTCTTAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCA 7827839 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 |||||||| | || || || || ||||| || || || || | || ||||| | ||| Sbjct 7827840 AGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGGG 7827899 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | || ||||||||| ||| | || |||| || | | | ||||||| |||| Sbjct 7827900 ATCCCT-TCCTTGTCC-TGAATCTTGGCTTTGACATTGTCAATAGTGTCGGAGCTTTCCA 7827957 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || ||||| || || || |||||||| || |||||||| Sbjct 7827958 CCTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 7828006 Score = 105 bits (116), Expect = 6e-18 Identities = 156/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| |||||| ||| |||||||||||||| || || | ||||| | | | || Sbjct 7826883 AACACCAAATGCAGTGTGGATTCCTTCTGAATGTTGTAATCTGCAAGGGTCCTCCCATCT 7826942 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || ||||||||||| || || |||| | ||| ||||| | |||| || |||||| || Sbjct 7826943 TCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCT 7827002 Query 41771 ATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGA---CTCCACCTCCACCGTTAT 41826 ||| || ||||| | | | | |||||| ||| ||| ||||||| || || Sbjct 7827003 TGGATCTTGGCCTTCACATTATCA-ATAGTGTC---CGAACTCTCTACCTCCAGAGTGAT 7827058 Query 41827 CGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || || ||||| || ||||| |||||| Sbjct 7827059 TGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCATG 7827095 Score = 98.7 bits (108), Expect = 9e-16 Identities = 164/234 (70%), Gaps = 10/234 (4%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| ||| || || ||||||||| ||||| ||||| | Sbjct 7832649 GCCACCACGGAGACGAAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGC 7832708 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || | || || || || |||||||| || || | | |||||| || | || Sbjct 7832709 AAGAGTACGACCATCTTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGG 7832768 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTC---GCTCGAC 41809 | || |||||||||| ||| || ||| || | ||| ||||| ||| Sbjct 7832769 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATC--GTGTCAGAGCTT--- 7832823 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||||| ||||| || ||||| ||||| || || || |||||||||||| Sbjct 7832824 TCAACCTCCAAAGTTATAGTCTTACCAGTCAGGGTTTTCACAAAAATCTGCATG 7832877 Score = 98.7 bits (108), Expect = 9e-16 Identities = 164/234 (70%), Gaps = 10/234 (4%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| ||| || || ||||||||| ||||| ||||| | Sbjct 7861391 GCCACCACGGAGACGAAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGC 7861450 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || | || || || || |||||||| || || | | |||||| || | || Sbjct 7861451 AAGAGTACGACCATCTTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGG 7861510 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTC---GCTCGAC 41809 | || |||||||||| ||| || ||| || | ||| ||||| ||| Sbjct 7861511 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATC--GTGTCAGAGCTT--- 7861565 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||||| ||||| || ||||| ||||| || || || |||||||||||| Sbjct 7861566 TCAACCTCCAAAGTTATAGTCTTACCGGTCAGGGTTTTCACAAAAATCTGCATG 7861619 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || |||||||| ||| ||||||||| ||||| || || | Sbjct 7832194 CCTCCACGAAGACGGAGCAAAAGATGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGCA 7832253 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || || || ||||| || || || |||| | ||| ||||||| ||| Sbjct 7832254 AGAGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGA 7832313 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTCC 41812 | | |||||| ||| ||| || ||| ||| | || | ||| | ||| ||| Sbjct 7832314 ATCCCCTCCTTATCCTGGATCTTAGCCTT-AACATTGTCA-ATTGTGTC-CGAACTCTCA 7832370 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || ||||| || || || ||||| || ||||||||||| Sbjct 7832371 ACCTCCAATGTGATGGTTTTCCCAGTGAGTGTCTTCACAAAAATCTGCAT 7832420 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| || || ||||| | | || ||| | || || |||||||| ||||| || Sbjct 7826675 CTCCTTCTGGATATTGTAGTCAGCCAAAGTACGCCCATCCTCCAGCTGCTTCCCGGCAAA 7826734 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACG 41789 |||| | ||| || || | |||| | ||||||||| |||||| ||||| | Sbjct 7826735 AATCAACCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCCTGGATTTTAGCCTTCACATT 7826794 Query 41790 ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||||| ||| ||||||| || || ||||| ||||||| ||||| | Sbjct 7826795 ATCA-ATGGTGTCTGAACTCTCAACCTCCAGGGTAATGGTTTTTCCCGTCAATGTCTTCA 7826853 Query 41850 CGAAAATCTGCAT 41862 ||||||||||||| Sbjct 7826854 CGAAAATCTGCAT 7826866 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| |||||||| ||| ||||||||| ||||| || || | Sbjct 7860936 CCTCCACGGAGTCGGAGCACAAGATGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGCA 7860995 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || || || || || || || || |||| | ||| ||||| | |||| Sbjct 7860996 AGAGTCCTTCCATCCTCAAGTTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGA 7861055 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTCC 41812 | | |||||| ||| ||| || ||||| | | || | ||| | ||| ||| Sbjct 7861056 ATCCCCTCCTTATCCTGGATCTTAGCCTTCA-CATTGTCA-ATTGTGTC-CGAACTCTCA 7861112 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || ||||| || || || ||||| || ||||||||||| Sbjct 7861113 ACCTCCAATGTGATGGTTTTCCCAGTGAGTGTCTTCACAAAAATCTGCAT 7861162 >seq4831 Length=230 Score = 113 bits (124), Expect = 4e-20 Identities = 143/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||| || ||||| ||||||| ||||| | |||| ||||||||||| |||||||| Sbjct 207 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 148 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAAC 41788 || || ||||| ||||||| |||| | |||||||||| ||| || ||| || Sbjct 147 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 88 Query 41789 GACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTT 41848 | || | ||||| || || ||||| | ||||| || || ||||| || || || Sbjct 87 GTCG--ATGGTGTCCGATGATTCGACCTCTAGGGTTATGGTCTTTCCCGTTAGGGTTTTC 30 Query 41849 ACGAAAATCTGCATG 41863 ||||| ||||||||| Sbjct 29 ACGAAGATCTGCATG 15 >seq3 Length=28715784 Score = 107 bits (118), Expect = 2e-18 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| ||||| | || || || || || ||||||||| ||||| || | | Sbjct 25365188 GCCGCCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAAACCGC 25365247 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||||||| |||| ||||||||||| |||||||| ||||| ||||| ||||| | || Sbjct 25365248 CAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCTGGTGG 25365307 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 || | ||||||||| ||| || ||| || | ||| || ||||| |||| Sbjct 25365308 AATCCCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGA-TCA-TGTCGGAGCTCTCC 25365365 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| | || || || || || ||| || || || || |||||||| Sbjct 25365366 ACCTCGAGAGTGATGGTCTTGCCGATCAAAGTTTTCACAAAGATCTGCAT 25365415 >seq1 Length=28801852 Score = 105 bits (116), Expect = 6e-18 Identities = 112/145 (77%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| ||||| | || || || || || ||||||||| ||||| || || | Sbjct 25126061 GCCGCCGCGGAGACGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCTGC 25126002 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||||||||| || |||||||| |||||||| ||||| ||||| ||||||| || Sbjct 25126001 CAAGGTGCGCTCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGG 25125942 Query 41755 AA-CGCTCTCCTTGTCCATGATTTT 41778 || | || || |||||| ||| || Sbjct 25125941 AATCTCT-TCGTTGTCCTGGATCTT 25125918 >seq3654 Length=575 Score = 98.7 bits (108), Expect = 9e-16 Identities = 164/234 (70%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| ||| || || ||||||||| ||||| ||||| | Sbjct 306 GCCACCACGGAGACGAAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGC 247 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || | || || || || |||||||| || || | | |||||| || | || Sbjct 246 AAGAGTACGACCATCTTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGG 187 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTC---GCTCGAC 41809 | || |||||||||| ||| || ||| || | ||| ||||| ||| Sbjct 186 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATC--GTGTCAGAGCTT--- 132 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||||| ||||| || ||||| ||||| || || || |||||||||||| Sbjct 131 TCAACCTCCAAAGTTATAGTCTTACCAGTCAGGGTTTTCACAAAAATCTGCATG 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462276007492800