Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0
01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq68470 159 3e-34
seq68514 149 5e-31
seq43778 134 1e-26
seq71848 129 5e-25
seq68153 129 5e-25
seq13742 129 5e-25
seq68152 125 6e-24
seq43799 120 3e-22
seq43779 111 1e-19
seq99008 93.3 4e-14
seq49145 93.3 4e-14
seq77946 87.8 2e-12
seq41899 82.4 7e-11
>seq68470
Length=2690
Score = 159 bits (176), Expect = 3e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|||||||||| | | || | |||| || ||||| || || |||||||||||| |
Sbjct 433 CCTCCGCGTAGACGAAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTGTAATCGGCC 374
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||||| ||||||||||||||||||||| |||| || | |||||| || || ||
Sbjct 373 AAGGTGCGGCCGTCCTCGAGCTGTTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGGGGA 314
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| |||||||||||| ||| || || || | |||| |||||| | |||||||||
Sbjct 313 ATTCCCTCCTTGTCTTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACT 254
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|||| || | |||||||||||||| ||||| || || ||||||||| ||
Sbjct 253 TCGAGAGTAATAGTTTTGCCGGTCAGGGTTTTCACGAAGATCTGCATGCCT 203
Score = 122 bits (134), Expect = 8e-23
Identities = 132/175 (75%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||||||| || ||||| ||||||||||| ||||||
Sbjct 175 GTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCA 116
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| || || || || |||||||||||| || || ||
Sbjct 115 GCAAAGATAAGCCTCTGCTGGTCCGGCGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTT 56
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCA 118716
|| | |||| |||||||| ||||||||| |||| || | |||||||||||||
Sbjct 55 ACGTTGTCGATGGTGTCCGAGCTCTCGACTTCGAGAGTAATAGTTTTGCCGGTCA 1
Score = 114 bits (126), Expect = 1e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || || |||||||| || ||||| || || || || || |||
Sbjct 631 GTTGACTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCTTCCAGTTGCTTGCCA 572
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| || || || || |||||||||||| ||| || ||
Sbjct 571 GCAAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGAATCTTCGCCTTG 512
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | |||||| ||||||| ||| | ||| || ||||| || |||
Sbjct 511 ACGTTATCGATCGTGTCTGAGCTCTCAACCTCGAGGGTGATCGTCTTCCCGGTTAGGGTT 452
Query 118722 TTTACAAAAATCTGCATGGCT 118742
|| ||||| ||||||||| ||
Sbjct 451 TTGACAAAGATCTGCATGCCT 431
Score = 105 bits (116), Expect = 6e-18
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || ||||| ||||| | ||| | |||||| |||||||| |||
Sbjct 1087 GTCGACTCCTTCTGGATGTTATAATCCGCAAGAGTCCTTCCATCCTCAAGCTGTTTGCCA 1028
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| | |||||||||||| || || || || ||||| ||| |||||| ||
Sbjct 1027 GCGAAGATCAAACGCTGCTGATCCGGTGGAATTCCTTCCTTATCTTGGATTTTTGCCTTG 968
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| | |||||| || || | || | ||||| || || || ||
Sbjct 967 ACATTGTCAATTGTGTCTGAGCTCTCAACTTCCAAAGTAATTGTTTTCCCAGTAAGGGTC 908
Query 118722 TTTACAAAAATCTGCATGGCT 118742
|| ||||| ||||||||| ||
Sbjct 907 TTAACAAATATCTGCATGCCT 887
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || |||||||||||||||||||||||| || ||||| ||| || | |||
Sbjct 866 GTGGAGAGTTGACTCTTTTTGAATGTTGTAATCGGCCAAGGTGCGGCCATCTTCCAACTG 807
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| |||| | | ||||| || || || || ||||| ||||| || ||
Sbjct 806 CTTACCGGCGAAGATCAATCTTTGCTGGTCCGGCGGGATCCCCTCTTTGTCCTGGATCTT 747
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | || | || |||| ||||| ||||| | || | ||| || || ||
Sbjct 746 GGCCTTGACGTTATCAATCGTATCCGAACTCTCCACCTCCAGAGTGATCGTCTTCCCAGT 687
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || ||||||||
Sbjct 686 TAGGGTTTTGACGAAGATCTGCAT 663
>seq68514
Length=8688
Score = 149 bits (164), Expect = 5e-31
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||||| || ||||| || || |||||||||||| || ||||| ||| ||
Sbjct 574 CACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTC 515
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||| || ||||| ||| |||| |||||||||||||| ||||| || |||||||||||
Sbjct 514 GAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCCTG 455
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||| | |||||| || |||| || | ||||||
Sbjct 454 GATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTT 395
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || ||||| || || ||||||||
Sbjct 394 GCCGGTTAGGGTTTTCACGAAGATCTGCAT 365
Score = 141 bits (156), Expect = 8e-29
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || |||||||| |||||||||||| || || || || ||||| || |||||
Sbjct 789 GTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGTTGCTTTCCG 730
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| || | |||||| |||||||| || |||||||||||| || || ||
Sbjct 729 GCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTC 670
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | |||||||||||||| ||| | ||| || |||||||| |||
Sbjct 669 ACGTTATCGATCGTGTCGGAGCTCTCGACCTCGAGGGTAATCGTCTTCCCGGTCAGGGTT 610
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 609 TTGACGAAGATCTGCATG 592
Score = 134 bits (148), Expect = 1e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || ||||||||||||||||||||| || |||||| || ||||| || || ||
Sbjct 8185 GTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCG 8126
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||||||||||||||| || || || || ||||||||||| || || ||
Sbjct 8125 GCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTG 8066
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | |||||| || |||| ||| | || |||||||| || |||
Sbjct 8065 ACGTTGTCGATTGTGTCGGAGCTCTCCACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTT 8006
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||| ||||||||
Sbjct 8005 TTCACAAATATCTGCAT 7989
Score = 114 bits (126), Expect = 1e-20
Identities = 153/209 (73%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCTCG 118589
|||| |||| || ||||| ||||||||||| ||||| ||| | ||| || ||||||
Sbjct 8652 CAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCAGCTAA-AGTACGGCCATCCTCA 8594
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || ||||| ||||||| | ||||||||| || || || || ||||| || |
Sbjct 8593 AGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGAATCCCTTCCTTATCCTGA 8534
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | ||| || | ||||| ||||| | ||| | |||||
Sbjct 8533 ATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCCACCTCCAGGGTAATTGTTTTC 8474
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || || |||||||||||
Sbjct 8473 CCAGTAAGAGTCTTGACGAAAATCTGCAT 8445
Score = 113 bits (124), Expect = 4e-20
Identities = 156/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--A 118583
|||||||| || | || ||||| || |||||||||||||| | || || | | | |
Sbjct 8429 CAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATC-CGCA-AGCGTCCTTCCA 8372
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||| ||||| || || || |||| || ||||||||||| || || || || ||||||
Sbjct 8371 TCCTCCAGCTGCTTCCCTGCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCTTCCTTG 8312
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
|| |||||| || | | || | |||||| | ||||||||| || | || | |
Sbjct 8311 TCCTGGATTTTTGCCTTGATGTTGTCAATGGTGTCAGAGCTCTCGACTTCCAGAGTGATC 8252
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||| || || ||||||||
Sbjct 8251 GTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCAT 8217
>seq43778
Length=4696
Score = 134 bits (148), Expect = 1e-26
Identities = 158/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCT 118587
||||||||||| || ||||| || || |||||||| || ||| | ||| || ||| |
Sbjct 3522 CACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCT-AGAGTACGGCCATCTT 3580
Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
| || ||||| ||||| |||| | | ||||||||||||||| ||||||||||||||
Sbjct 3581 CAAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGATCGGGAGGGATGCCCTCCTTGTCCT 3640
Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707
||| || || || | |||| ||||| | ||| || ||||| | || | ||||
Sbjct 3641 GAATCTTAGCCTTGACATTGTCGATTGTGTCAGAGCTTTCAACCTCCAAAGTTATAGTTT 3700
Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || ||||| ||||| ||||||||||||||
Sbjct 3701 TACCAGTCAGGGTTTTCACAAAAATCTGCAT 3731
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | |||||||||||| || | ||| || || || ||||||||||||||
Sbjct 2821 CCTCCACGCAGTCTCAACACCAAATGCAATGTGGATTCCTTCTGAATGTTGTAATCTGCA 2880
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || | | ||| || ||||| || || || | || | | |||||| || || ||
Sbjct 2881 AGGGTCCTCCCATCTTCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGA 2940
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
||||||||||| ||| || || || || | || | ||||||| ||||| |||
Sbjct 2941 ATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTATCAATCGTGTCCGAACTCTCTACC 3000
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| | || | ||||| || || ||||| || |||||||| ||||||
Sbjct 3001 TCCAGAGTGATTGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCATG 3048
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || || || ||||| || || ||| ||| |||||| ||||| || ||
Sbjct 2623 GTAGACTCCTTCTGGATATTGTAGTCAGCCAAAGTACGCCCATCCTCCAGCTGCTTCCCG 2682
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| | || | | ||||||||| ||||| || || |||||||| ||||| ||
Sbjct 2683 GCAAAAATCAACCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCCTGGATTTTAGCCTTC 2742
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | |||||| | ||||| ||||| | ||| | ||||| || |||| ||
Sbjct 2743 ACATTATCAATGGTGTCTGAACTCTCAACCTCCAGGGTGATGGTTTTTCCTGTCAATGTC 2802
Query 118722 TTTACAAAAATCTGCAT 118738
|| || |||||||||||
Sbjct 2803 TTCACGAAAATCTGCAT 2819
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || |||||||| ||||| | || | ||| ||
Sbjct 3067 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTATAATCTGCAAGGGTCCTACCATCTTCA 3126
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || ||||| | || | | |||||| |||||||| ||||||||||| |||
Sbjct 3127 AGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCGGGAGGAATGCCCTCCTTATCTTGG 3186
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | |||||| | || || ||||| | || | || ||
Sbjct 3187 ATCTTGGCCTTCACATTATCTATGGTGTCTGAACTTTCCACCTCCAAAGTGATGGTCTTC 3246
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| ||| || ||||| ||||||||
Sbjct 3247 CCAGTCAAAGTCTTCACAAAGATCTGCAT 3275
>seq71848
Length=4061
Score = 129 bits (142), Expect = 5e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| |||||||||||||||||| | ||| || ||||||||||||
Sbjct 3597 GTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCGAGAGTCCGGCCATCCTCGAGCTG 3656
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| ||||||| | |||||| || ||||| || ||||| ||||| || ||
Sbjct 3657 CTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTTGTCCTGGATCTT 3716
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||| | |||||| ||||| | ||| | ||| || |||||
Sbjct 3717 GGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTGATCGTCTTCCCGGT 3776
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||||||
Sbjct 3777 CAACGTCTTGACGAAGATCTGCAT 3800
Score = 120 bits (132), Expect = 3e-22
Identities = 155/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|||||| | ||||| || || || || || ||||| |||||| || ||||| ||
Sbjct 3816 CAACACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGCCAGGGTGCGGCCGTC 3875
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || || ||| ||||||| | |||||| || || || || || ||||||||
Sbjct 3876 CTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCTTCCTTGTC 3935
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | |||| ||||| | |||||| ||||| | ||| | |||
Sbjct 3936 CTGGATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTGATCGT 3995
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| ||||||||||| || || || |||||||||
Sbjct 3996 CTTCCCGGTCAGAGTCTTGACGAAGATCTGCATG 4029
>seq68153
Length=714
Score = 129 bits (142), Expect = 5e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || |||||||||||||| | ||| ||| ||||| |||||
Sbjct 83 TGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGCCCGTCCTCAAGCTGC 142
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| |||||| ||||||| | ||||||||| || || || || |||||||| ||| ||
Sbjct 143 TTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCCTGAATCTTG 202
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
|| || | || | ||| |||| ||||| ||||| | ||| | ||| || ||||||
Sbjct 203 GCCTTGACGTTGTCAATGGTATCCGAACTCTCCACCTCCAGGGTAATCGTCTTCCCGGTC 262
Query 118716 AGAGTTTTTACAAAAATCTGCATG 118739
| || || |||||||||||||||
Sbjct 263 AATGTCTTGACAAAAATCTGCATG 286
Score = 105 bits (116), Expect = 6e-18
Identities = 155/216 (72%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--A 118583
|||||||| || | || || || || |||||||||||||| | || || | | | |
Sbjct 301 CAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATC-CGCA-AGCGTCCTTCCA 358
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||| ||||| || |||||| |||| | ||||||||| || || || || || ||||||
Sbjct 359 TCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCTTCCTTG 418
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
|| || || || || | |||| ||||| | |||||| || |||| || | |
Sbjct 419 TCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCAACTTCGAGTGTGATC 478
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| || || || || ||||| || || |||||||||
Sbjct 479 GTCTTTCCCGTTAGGGTTTTGACGAATATCTGCATG 514
>seq13742
Length=406
Score = 129 bits (142), Expect = 5e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || ||||||||||| || |||||| |||||||||||
Sbjct 163 GTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTG 222
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||||| ||| |||| || |||||||| || || || || || |||||||| || ||
Sbjct 223 CTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTT 282
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||| |||||| ||||||| || | || ||||||||
Sbjct 283 AGCCTTGACATTGTCGATCGTGTCGAAGCTCTCCACCTCGAGAGTGATGGTCTTGCCGGT 342
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| |||||| ||||| ||||||||
Sbjct 343 CAAAGTTTTCACAAAGATCTGCAT 366
>seq68152
Length=1216
Score = 125 bits (138), Expect = 6e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || |||||||||||||| | ||| || ||||| |||||
Sbjct 959 TGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGGCCGTCCTCAAGCTGC 1018
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| |||||| ||||||| | ||||||||| || || || || |||||||| ||| ||
Sbjct 1019 TTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCCTGAATCTTG 1078
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
|| || | || | ||| |||| ||||| ||||| | ||| | ||| || ||||||
Sbjct 1079 GCCTTGACATTGTCAATGGTATCCGAACTCTCCACCTCCAGGGTAATCGTCTTCCCGGTC 1138
Query 118716 AGAGTTTTTACAAAAATCTGCATG 118739
| || || |||||||||||||||
Sbjct 1139 AATGTCTTGACAAAAATCTGCATG 1162
>seq43799
Length=2218
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || || ||||| || ||||| || || | ||| | ||| ||
Sbjct 97 ACCAAGTGAAGAGTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCATCTTCA 156
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| |||||||| | ||||| | ||||||||| || || || |||||||||||| |
Sbjct 157 AGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTGA 216
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|||||| ||| || | |||| |||||| | || || ||||| | || | |||||
Sbjct 217 ATTTTTGCTTTCACATTGTCGATGGTGTCAGAACTTTCAACCTCAAGAGTAATTGTTTTT 276
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||| ||||||||
Sbjct 277 CCAGTGAGGGTTTTCACAAAGATCTGCAT 305
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || ||||| ||||| | ||||| |||||||
Sbjct 781 ACCAAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCAGCAAGTGTGCGACCATCCTCG 840
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| || || |||| || | |||||| || || || || || |||||||| |
Sbjct 841 AGCTGTTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGA 900
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||| || | || | |||||| | ||| || ||||| | || | ||| |||
Sbjct 901 ATCTTGGCTTTCACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGAGTAATCGTCTTG 960
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || |||||||| ||||||||
Sbjct 961 CCAGTGAGGGTCTTTACAAAGATCTGCAT 989
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || || || || || || || || || | ||||| |||||||
Sbjct 1009 ACCAAGTGGAGGGTTGATTCCTTCTGGATATTATAGTCAGCAAGTGTGCGACCATCCTCG 1068
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| ||||| |||| || | ||||||||| || || || || ||||||||
Sbjct 1069 AGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTGG 1128
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||| || | || | |||||| | ||| || ||||| | ||| | || |||
Sbjct 1129 ATCTTGGCTTTTACATTATCAATGGTGTCGGAGCTTTCAACCTCAAGGGTTATTGTCTTG 1188
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| |||||||| ||||| || |||||
Sbjct 1189 CCGGTGAGAGTTTTCACAAAGATTTGCAT 1217
Score = 102 bits (112), Expect = 7e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| |||| || ||||| || || |||||||| || | ||| || ||| ||
Sbjct 324 CACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCATCTTC 383
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|| ||||| || || |||| | | ||| ||||| || || ||||||||||||||
Sbjct 384 AAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTG 443
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| ||||| | ||| || ||||| | || | || ||
Sbjct 444 GATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTTTCAACCTCCAAAGTTATAGTCTT 503
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| ||||| ||||| |||||||||||||||
Sbjct 504 ACCAGTCAGGGTTTTCACAAAAATCTGCATG 534
>seq43779
Length=2831
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || || ||||| || || | |||||| |||||||
Sbjct 211 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAGTCAGCAAGAGTGCGACCATCCTCG 270
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| || || ||||||| | ||||| || || || || || ||||| ||
Sbjct 271 AGCTGTTTACCGGCAAAGATGAGTCTTTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGG 330
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||| || | || | |||||| | ||| |||||||| | ||| | || |||
Sbjct 331 ATCTTGGCTTTTACGTTATCAATGGTGTCAGAGCTTTCGACCTCAAGGGTTATGGTCTTG 390
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| ||||| || ||||| || |||||
Sbjct 391 CCGGTGAGAGTCTTCACAAAGATTTGCAT 419
>seq99008
Length=1232
Score = 93.3 bits (102), Expect = 4e-14
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| ||| ||||| ||||| |||||||| ||| | || | |||||||||||
Sbjct 3 GTGGAGTGTTGACTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTG 62
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||| ||| |||||||||||||||| || || || || |||||||||||
Sbjct 63 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTC 113
>seq49145
Length=1022
Score = 93.3 bits (102), Expect = 4e-14
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || ||||||||||| || |||||| |||||||||||
Sbjct 849 GTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTG 790
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||||||| |||| || |||||||| || || || || || ||||||||
Sbjct 789 CTTTCCAGCGAAGATCAGCCGCTGCTGGTCTGGTGGAATCCCTTCCTTGTC 739
>seq77946
Length=1578
Score = 87.8 bits (96), Expect = 2e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| ||| ||||| ||||| |||||||| ||| | || | |||||||||||
Sbjct 1453 GTGGAGTGTTGACTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTG 1512
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||| ||| |||||||||||||||| || || || || |||||||| ||
Sbjct 1513 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTATC 1563
>seq41899
Length=578
Score = 82.4 bits (90), Expect = 7e-11
Identities = 145/210 (69%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|| ||||||| || ||||| |||||||||||||||||| ||| | |||||
Sbjct 210 ACAAAGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCGCGAGTCCAGCCGTCCTCA 151
Query 118590 AGCT-GTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
| | | || | ||| ||||||| | |||||| | || || || |||||||||||
Sbjct 150 AAATTGCTTGCTGGCGAAGATGAGCCTCTGCTGGCCCGGCGGAATCCCCTCCTTGTCCTG 91
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | |||| ||||| | |||||| ||||| || | |||||
Sbjct 90 AATCTTCGTCTTCACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCTGAGTGATGGTTTT 31
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || || || || ||||||||
Sbjct 30 CCCGGTCGACGTCTTGACGAAGATCTGCAT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 432569440489696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |