Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq68470 159 3e-34 seq68514 149 5e-31 seq43778 134 1e-26 seq71848 129 5e-25 seq68153 129 5e-25 seq13742 129 5e-25 seq68152 125 6e-24 seq43799 120 3e-22 seq43779 111 1e-19 seq99008 93.3 4e-14 seq49145 93.3 4e-14 seq77946 87.8 2e-12 seq41899 82.4 7e-11 >seq68470 Length=2690 Score = 159 bits (176), Expect = 3e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 |||||||||| | | || | |||| || ||||| || || |||||||||||| | Sbjct 433 CCTCCGCGTAGACGAAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTGTAATCGGCC 374 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| ||||||||||||||||||||| |||| || | |||||| || || || Sbjct 373 AAGGTGCGGCCGTCCTCGAGCTGTTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGGGGA 314 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || |||||||||||| ||| || || || | |||| |||||| | ||||||||| Sbjct 313 ATTCCCTCCTTGTCTTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACT 254 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 |||| || | |||||||||||||| ||||| || || ||||||||| || Sbjct 253 TCGAGAGTAATAGTTTTGCCGGTCAGGGTTTTCACGAAGATCTGCATGCCT 203 Score = 122 bits (134), Expect = 8e-23 Identities = 132/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||||||| || ||||| ||||||||||| |||||| Sbjct 175 GTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCA 116 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| || || || || |||||||||||| || || || Sbjct 115 GCAAAGATAAGCCTCTGCTGGTCCGGCGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTT 56 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCA 118716 || | |||| |||||||| ||||||||| |||| || | ||||||||||||| Sbjct 55 ACGTTGTCGATGGTGTCCGAGCTCTCGACTTCGAGAGTAATAGTTTTGCCGGTCA 1 Score = 114 bits (126), Expect = 1e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || || |||||||| || ||||| || || || || || ||| Sbjct 631 GTTGACTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCTTCCAGTTGCTTGCCA 572 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| || || || || |||||||||||| ||| || || Sbjct 571 GCAAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGAATCTTCGCCTTG 512 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | |||||| ||||||| ||| | ||| || ||||| || ||| Sbjct 511 ACGTTATCGATCGTGTCTGAGCTCTCAACCTCGAGGGTGATCGTCTTCCCGGTTAGGGTT 452 Query 118722 TTTACAAAAATCTGCATGGCT 118742 || ||||| ||||||||| || Sbjct 451 TTGACAAAGATCTGCATGCCT 431 Score = 105 bits (116), Expect = 6e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||| ||||| | ||| | |||||| |||||||| ||| Sbjct 1087 GTCGACTCCTTCTGGATGTTATAATCCGCAAGAGTCCTTCCATCCTCAAGCTGTTTGCCA 1028 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | |||||||||||| || || || || ||||| ||| |||||| || Sbjct 1027 GCGAAGATCAAACGCTGCTGATCCGGTGGAATTCCTTCCTTATCTTGGATTTTTGCCTTG 968 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | |||||| || || | || | ||||| || || || || Sbjct 967 ACATTGTCAATTGTGTCTGAGCTCTCAACTTCCAAAGTAATTGTTTTCCCAGTAAGGGTC 908 Query 118722 TTTACAAAAATCTGCATGGCT 118742 || ||||| ||||||||| || Sbjct 907 TTAACAAATATCTGCATGCCT 887 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || |||||||||||||||||||||||| || ||||| ||| || | ||| Sbjct 866 GTGGAGAGTTGACTCTTTTTGAATGTTGTAATCGGCCAAGGTGCGGCCATCTTCCAACTG 807 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| | | ||||| || || || || ||||| ||||| || || Sbjct 806 CTTACCGGCGAAGATCAATCTTTGCTGGTCCGGCGGGATCCCCTCTTTGTCCTGGATCTT 747 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | || |||| ||||| ||||| | || | ||| || || || Sbjct 746 GGCCTTGACGTTATCAATCGTATCCGAACTCTCCACCTCCAGAGTGATCGTCTTCCCAGT 687 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || |||||||| Sbjct 686 TAGGGTTTTGACGAAGATCTGCAT 663 >seq68514 Length=8688 Score = 149 bits (164), Expect = 5e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| || ||||| || || |||||||||||| || ||||| ||| || Sbjct 574 CACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTC 515 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||| || ||||| ||| |||| |||||||||||||| ||||| || ||||||||||| Sbjct 514 GAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCCTG 455 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||| | |||||| || |||| || | |||||| Sbjct 454 GATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTT 395 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || ||||| || || |||||||| Sbjct 394 GCCGGTTAGGGTTTTCACGAAGATCTGCAT 365 Score = 141 bits (156), Expect = 8e-29 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || |||||||| |||||||||||| || || || || ||||| || ||||| Sbjct 789 GTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGTTGCTTTCCG 730 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| || | |||||| |||||||| || |||||||||||| || || || Sbjct 729 GCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTC 670 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | |||||||||||||| ||| | ||| || |||||||| ||| Sbjct 669 ACGTTATCGATCGTGTCGGAGCTCTCGACCTCGAGGGTAATCGTCTTCCCGGTCAGGGTT 610 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 609 TTGACGAAGATCTGCATG 592 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || ||||||||||||||||||||| || |||||| || ||||| || || || Sbjct 8185 GTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCG 8126 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||||||||||||||| || || || || ||||||||||| || || || Sbjct 8125 GCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTG 8066 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | |||||| || |||| ||| | || |||||||| || ||| Sbjct 8065 ACGTTGTCGATTGTGTCGGAGCTCTCCACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTT 8006 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 8005 TTCACAAATATCTGCAT 7989 Score = 114 bits (126), Expect = 1e-20 Identities = 153/209 (73%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCTCG 118589 |||| |||| || ||||| ||||||||||| ||||| ||| | ||| || |||||| Sbjct 8652 CAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCAGCTAA-AGTACGGCCATCCTCA 8594 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| ||||||| | ||||||||| || || || || ||||| || | Sbjct 8593 AGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGAATCCCTTCCTTATCCTGA 8534 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||| || | ||||| ||||| | ||| | ||||| Sbjct 8533 ATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCCACCTCCAGGGTAATTGTTTTC 8474 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || || ||||||||||| Sbjct 8473 CCAGTAAGAGTCTTGACGAAAATCTGCAT 8445 Score = 113 bits (124), Expect = 4e-20 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--A 118583 |||||||| || | || ||||| || |||||||||||||| | || || | | | | Sbjct 8429 CAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATC-CGCA-AGCGTCCTTCCA 8372 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||| ||||| || || || |||| || ||||||||||| || || || || |||||| Sbjct 8371 TCCTCCAGCTGCTTCCCTGCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCTTCCTTG 8312 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || |||||| || | | || | |||||| | ||||||||| || | || | | Sbjct 8311 TCCTGGATTTTTGCCTTGATGTTGTCAATGGTGTCAGAGCTCTCGACTTCCAGAGTGATC 8252 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| ||||| || || |||||||| Sbjct 8251 GTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCAT 8217 >seq43778 Length=4696 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCT 118587 ||||||||||| || ||||| || || |||||||| || ||| | ||| || ||| | Sbjct 3522 CACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCT-AGAGTACGGCCATCTT 3580 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | || ||||| ||||| |||| | | ||||||||||||||| |||||||||||||| Sbjct 3581 CAAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGATCGGGAGGGATGCCCTCCTTGTCCT 3640 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| || || || | |||| ||||| | ||| || ||||| | || | |||| Sbjct 3641 GAATCTTAGCCTTGACATTGTCGATTGTGTCAGAGCTTTCAACCTCCAAAGTTATAGTTT 3700 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || ||||| ||||| |||||||||||||| Sbjct 3701 TACCAGTCAGGGTTTTCACAAAAATCTGCAT 3731 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| || | |||||||||||| || | ||| || || || |||||||||||||| Sbjct 2821 CCTCCACGCAGTCTCAACACCAAATGCAATGTGGATTCCTTCTGAATGTTGTAATCTGCA 2880 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || | | ||| || ||||| || || || | || | | |||||| || || || Sbjct 2881 AGGGTCCTCCCATCTTCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGA 2940 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||||||||| ||| || || || || | || | ||||||| ||||| ||| Sbjct 2941 ATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTATCAATCGTGTCCGAACTCTCTACC 3000 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | || | ||||| || || ||||| || |||||||| |||||| Sbjct 3001 TCCAGAGTGATTGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCATG 3048 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || || ||||| || || ||| ||| |||||| ||||| || || Sbjct 2623 GTAGACTCCTTCTGGATATTGTAGTCAGCCAAAGTACGCCCATCCTCCAGCTGCTTCCCG 2682 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || | | ||||||||| ||||| || || |||||||| ||||| || Sbjct 2683 GCAAAAATCAACCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCCTGGATTTTAGCCTTC 2742 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | |||||| | ||||| ||||| | ||| | ||||| || |||| || Sbjct 2743 ACATTATCAATGGTGTCTGAACTCTCAACCTCCAGGGTGATGGTTTTTCCTGTCAATGTC 2802 Query 118722 TTTACAAAAATCTGCAT 118738 || || ||||||||||| Sbjct 2803 TTCACGAAAATCTGCAT 2819 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || |||||||| ||||| | || | ||| || Sbjct 3067 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTATAATCTGCAAGGGTCCTACCATCTTCA 3126 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| | || | | |||||| |||||||| ||||||||||| ||| Sbjct 3127 AGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCGGGAGGAATGCCCTCCTTATCTTGG 3186 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| | || || ||||| | || | || || Sbjct 3187 ATCTTGGCCTTCACATTATCTATGGTGTCTGAACTTTCCACCTCCAAAGTGATGGTCTTC 3246 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||| || ||||| |||||||| Sbjct 3247 CCAGTCAAAGTCTTCACAAAGATCTGCAT 3275 >seq71848 Length=4061 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| |||||||||||||||||| | ||| || |||||||||||| Sbjct 3597 GTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCGAGAGTCCGGCCATCCTCGAGCTG 3656 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| ||||||| | |||||| || ||||| || ||||| ||||| || || Sbjct 3657 CTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTTGTCCTGGATCTT 3716 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||| | |||||| ||||| | ||| | ||| || ||||| Sbjct 3717 GGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTGATCGTCTTCCCGGT 3776 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||| Sbjct 3777 CAACGTCTTGACGAAGATCTGCAT 3800 Score = 120 bits (132), Expect = 3e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 |||||| | ||||| || || || || || ||||| |||||| || ||||| || Sbjct 3816 CAACACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGCCAGGGTGCGGCCGTC 3875 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || || ||| ||||||| | |||||| || || || || || |||||||| Sbjct 3876 CTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCTTCCTTGTC 3935 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | |||| ||||| | |||||| ||||| | ||| | ||| Sbjct 3936 CTGGATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTGATCGT 3995 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || ||||||||||| || || || ||||||||| Sbjct 3996 CTTCCCGGTCAGAGTCTTGACGAAGATCTGCATG 4029 >seq68153 Length=714 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || |||||||||||||| | ||| ||| ||||| ||||| Sbjct 83 TGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGCCCGTCCTCAAGCTGC 142 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || |||||| ||||||| | ||||||||| || || || || |||||||| ||| || Sbjct 143 TTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCCTGAATCTTG 202 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | || | ||| |||| ||||| ||||| | ||| | ||| || |||||| Sbjct 203 GCCTTGACGTTGTCAATGGTATCCGAACTCTCCACCTCCAGGGTAATCGTCTTCCCGGTC 262 Query 118716 AGAGTTTTTACAAAAATCTGCATG 118739 | || || ||||||||||||||| Sbjct 263 AATGTCTTGACAAAAATCTGCATG 286 Score = 105 bits (116), Expect = 6e-18 Identities = 155/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--A 118583 |||||||| || | || || || || |||||||||||||| | || || | | | | Sbjct 301 CAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATC-CGCA-AGCGTCCTTCCA 358 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||| ||||| || |||||| |||| | ||||||||| || || || || || |||||| Sbjct 359 TCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCTTCCTTG 418 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| ||||| | |||||| || |||| || | | Sbjct 419 TCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCAACTTCGAGTGTGATC 478 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || ||||| || || ||||||||| Sbjct 479 GTCTTTCCCGTTAGGGTTTTGACGAATATCTGCATG 514 >seq13742 Length=406 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || ||||||||||| || |||||| ||||||||||| Sbjct 163 GTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTG 222 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 ||||| ||| |||| || |||||||| || || || || || |||||||| || || Sbjct 223 CTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTT 282 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||| |||||| ||||||| || | || |||||||| Sbjct 283 AGCCTTGACATTGTCGATCGTGTCGAAGCTCTCCACCTCGAGAGTGATGGTCTTGCCGGT 342 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || |||||| ||||| |||||||| Sbjct 343 CAAAGTTTTCACAAAGATCTGCAT 366 >seq68152 Length=1216 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || |||||||||||||| | ||| || ||||| ||||| Sbjct 959 TGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGGCCGTCCTCAAGCTGC 1018 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || |||||| ||||||| | ||||||||| || || || || |||||||| ||| || Sbjct 1019 TTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCCTGAATCTTG 1078 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | || | ||| |||| ||||| ||||| | ||| | ||| || |||||| Sbjct 1079 GCCTTGACATTGTCAATGGTATCCGAACTCTCCACCTCCAGGGTAATCGTCTTCCCGGTC 1138 Query 118716 AGAGTTTTTACAAAAATCTGCATG 118739 | || || ||||||||||||||| Sbjct 1139 AATGTCTTGACAAAAATCTGCATG 1162 >seq43799 Length=2218 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || ||||| || ||||| || || | ||| | ||| || Sbjct 97 ACCAAGTGAAGAGTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCATCTTCA 156 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| |||||||| | ||||| | ||||||||| || || || |||||||||||| | Sbjct 157 AGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTGA 216 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 |||||| ||| || | |||| |||||| | || || ||||| | || | ||||| Sbjct 217 ATTTTTGCTTTCACATTGTCGATGGTGTCAGAACTTTCAACCTCAAGAGTAATTGTTTTT 276 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| ||||| |||||||| Sbjct 277 CCAGTGAGGGTTTTCACAAAGATCTGCAT 305 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| || || ||||| ||||| | ||||| ||||||| Sbjct 781 ACCAAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCAGCAAGTGTGCGACCATCCTCG 840 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || || |||| || | |||||| || || || || || |||||||| | Sbjct 841 AGCTGTTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGA 900 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||| || | || | |||||| | ||| || ||||| | || | ||| ||| Sbjct 901 ATCTTGGCTTTCACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGAGTAATCGTCTTG 960 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || |||||||| |||||||| Sbjct 961 CCAGTGAGGGTCTTTACAAAGATCTGCAT 989 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || || || || || || || || || | ||||| ||||||| Sbjct 1009 ACCAAGTGGAGGGTTGATTCCTTCTGGATATTATAGTCAGCAAGTGTGCGACCATCCTCG 1068 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| ||||| |||| || | ||||||||| || || || || |||||||| Sbjct 1069 AGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTGG 1128 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||| || | || | |||||| | ||| || ||||| | ||| | || ||| Sbjct 1129 ATCTTGGCTTTTACATTATCAATGGTGTCGGAGCTTTCAACCTCAAGGGTTATTGTCTTG 1188 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| |||||||| ||||| || ||||| Sbjct 1189 CCGGTGAGAGTTTTCACAAAGATTTGCAT 1217 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| |||| || ||||| || || |||||||| || | ||| || ||| || Sbjct 324 CACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCATCTTC 383 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || ||||| || || |||| | | ||| ||||| || || |||||||||||||| Sbjct 384 AAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTG 443 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | ||| || ||||| | || | || || Sbjct 444 GATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTTTCAACCTCCAAAGTTATAGTCTT 503 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || ||||| ||||| ||||||||||||||| Sbjct 504 ACCAGTCAGGGTTTTCACAAAAATCTGCATG 534 >seq43779 Length=2831 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || ||||| || || | |||||| ||||||| Sbjct 211 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAGTCAGCAAGAGTGCGACCATCCTCG 270 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || || ||||||| | ||||| || || || || || ||||| || Sbjct 271 AGCTGTTTACCGGCAAAGATGAGTCTTTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGG 330 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||| || | || | |||||| | ||| |||||||| | ||| | || ||| Sbjct 331 ATCTTGGCTTTTACGTTATCAATGGTGTCAGAGCTTTCGACCTCAAGGGTTATGGTCTTG 390 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||| || ||||| || ||||| Sbjct 391 CCGGTGAGAGTCTTCACAAAGATTTGCAT 419 >seq99008 Length=1232 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||| ||||| ||||| |||||||| ||| | || | ||||||||||| Sbjct 3 GTGGAGTGTTGACTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTG 62 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||| ||| |||||||||||||||| || || || || ||||||||||| Sbjct 63 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTC 113 >seq49145 Length=1022 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || ||||||||||| || |||||| ||||||||||| Sbjct 849 GTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTG 790 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||||||| |||| || |||||||| || || || || || |||||||| Sbjct 789 CTTTCCAGCGAAGATCAGCCGCTGCTGGTCTGGTGGAATCCCTTCCTTGTC 739 >seq77946 Length=1578 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||| ||||| ||||| |||||||| ||| | || | ||||||||||| Sbjct 1453 GTGGAGTGTTGACTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTG 1512 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||| ||| |||||||||||||||| || || || || |||||||| || Sbjct 1513 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTATC 1563 >seq41899 Length=578 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || ||||||| || ||||| |||||||||||||||||| ||| | ||||| Sbjct 210 ACAAAGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCGCGAGTCCAGCCGTCCTCA 151 Query 118590 AGCT-GTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 | | | || | ||| ||||||| | |||||| | || || || ||||||||||| Sbjct 150 AAATTGCTTGCTGGCGAAGATGAGCCTCTGCTGGCCCGGCGGAATCCCCTCCTTGTCCTG 91 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||||| | |||||| ||||| || | ||||| Sbjct 90 AATCTTCGTCTTCACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCTGAGTGATGGTTTT 31 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || |||||||| Sbjct 30 CCCGGTCGACGTCTTGACGAAGATCTGCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432569440489696