Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq92765 87.8 1e-12 >seq92765 Length=3923 Score = 87.8 bits (96), Expect = 1e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 20428 TGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGAT 20487 || || || || || |||||| || || || |||||||||||||| || || |||||| Sbjct 662 TGGCAGTTCTATGTGGCTAATGGGGAGTTATCATGTCAAATGTATCAGCGCTCTGCTGAT 603 Query 20488 ATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCA 20547 ||||| |||||||| || || || ||||| ||||| || | || | |||||||| Sbjct 602 ATGGGCCTGGGTGTGCCGTTTAACATTGCTTCATATGCCCTCTTGACATGCATGATTGCT 543 Query 20548 CATGTT 20553 |||||| Sbjct 542 CATGTT 537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398023742763160