Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0
01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq208088 167 5e-36
seq43799 161 2e-34
seq68470 152 1e-31
seq68514 149 1e-30
seq43778 149 1e-30
seq68152 143 6e-29
seq43779 141 2e-28
seq68153 140 7e-28
seq68490 122 2e-22
seq24834 107 4e-18
seq109229 102 2e-16
seq72069 98.7 2e-15
seq43798 96.9 8e-15
>seq208088
Length=533
Score = 167 bits (184), Expect = 5e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| |||||||| | || || || || | ||| || || |||||||| ||||||||
Sbjct 118 ATTCCACCTCTTAGACGGAGGACCAGGTGGAGTGTGGACTCCTTCTGAATGTTATAGTCG 177
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || || |||||||| ||||||||||| ||||| || || || ||
Sbjct 178 GCAAGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGT 237
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || |||||||| || ||||| ||||| || | ||| ||| |||
Sbjct 238 GGGATCCCTTCCTTGTCCTGAATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCC 297
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || |||||||| ||||| || || |||||||| ||||||||
Sbjct 298 ACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 347
Score = 113 bits (124), Expect = 1e-19
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || |||||||||| ||||| | || || || |||||||| |||
Sbjct 379 GTGGACTCCTTCTGGATGTTATAGTCAGCAAGAGTGCGGCCATCCTCGAGTTGTTTGCCA 438
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || ||||| || || || || || || ||||| |||||||| ||||| ||||||
Sbjct 439 GCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCTTTT 498
Query 104483 ACATTTTCTACGGTATC 104499
||||| || | ||| ||
Sbjct 499 ACATTATCAATGGTGTC 515
Score = 86.0 bits (94), Expect = 1e-11
Identities = 93/121 (77%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 104441 TGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCG 104500
|| || || || || ||||| || |||||||| || ||||| ||||| || | ||| |||
Sbjct 1 TGGTCTGGTGGGATCCCTTCCTTGTCCTGAATTTTGGCTTTGACATTGTCAATGGTGTCG 60
Query 104501 CTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| | || || || | || ||||| |||||||| || ||||| ||||||||||||||
Sbjct 61 G-AGCTCTCAACTTCCAAGGTGATAGTTTTACCAGTCAGGGTTTTCACAAATATCTGCAT 119
Query 104560 T 104560
|
Sbjct 120 T 120
>seq43799
Length=2218
Score = 161 bits (178), Expect = 2e-34
Identities = 154/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||||||||| || |||||||| | ||||| || || ||||| || || ||||||
Sbjct 109 GTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCATCTTCAAGCTGCTTTCCA 168
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| |||||||| ||||| || || || || || || || ||||| ||||||||
Sbjct 169 GCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTGAATTTTTGCTTTC 228
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || | ||| ||||| || ||||| || || ||||| || |||
Sbjct 229 ACATTGTCGATGGTGTCAGAACTTTCAACCTCAAGAGTAATTGTTTTTCCAGTGAGGGTT 288
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 289 TTCACAAAGATCTGCAT 305
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || || | ||| || | || | || ||||| ||||| ||||||||||||
Sbjct 988 ATACCACCCCTAAGTCGAAGGACCAAGTGGAGGGTTGATTCCTTCTGGATATTATAGTCA 1047
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | ||| || || || ||||| |||||||| || |||||||| ||||| ||
Sbjct 1048 GCAAGTGTGCGACCATCCTCGAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGT 1107
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| ||||||||||| || | ||| ||| |||
Sbjct 1108 GGGATCCCTTCCTTGTCCTGGATCTTGGCTTTTACATTATCAATGGTGTCGGAGCTTTCA 1167
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| || || || ||||| ||||| || |||||
Sbjct 1168 ACCTCAAGGGTTATTGTCTTGCCGGTGAGAGTTTTCACAAAGATTTGCAT 1217
Score = 152 bits (168), Expect = 1e-31
Identities = 164/216 (76%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| | || || || ||||| || || ||||||| ||||| | ||| ||
Sbjct 321 AAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCATC 380
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| |||||||| || ||||| |||| ||||||||||||||| || || || || || ||
Sbjct 381 TTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGGGATGCCCTCCTTGTC 440
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAAT 104523
||| ||||| || || ||||| || | || || ||| ||| ||||| | || ||
Sbjct 441 CTGGATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCT---TTCAACCTCCAAAGTTAT 497
Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||||||||| || ||||| ||||| ||||||||
Sbjct 498 AGTCTTACCAGTCAGGGTTTTCACAAAAATCTGCAT 533
Score = 143 bits (158), Expect = 6e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || ||||| |||| || || | ||| || || || ||||| ||
Sbjct 793 GTTGACTCCTTCTGGATGTTATAATCAGCAAGTGTGCGACCATCCTCGAGCTGTTTACCG 852
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || |||||||| || || || || || ||||| || ||||||||||| |||||
Sbjct 853 GCAAAGATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTTGGCTTTC 912
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| ||| ||||| || ||||| ||||| ||||| || ||
Sbjct 913 ACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGAGTAATCGTCTTGCCAGTGAGGGTC 972
Query 104543 TTTACAAATATCTGCAT 104559
|||||||| ||||||||
Sbjct 973 TTTACAAAGATCTGCAT 989
Score = 141 bits (156), Expect = 2e-28
Identities = 172/233 (74%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || || | || || | ||| | || ||||| ||||| || || |||||
Sbjct 532 ATGCCACCCCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCT 591
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || ||||||||||| || ||||| || ||||| || || || ||
Sbjct 592 GCAAGTGTGCGTCCATCCTCTAGTTGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGT 651
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506
|| || ||||| ||||||||||| || ||||| ||||| || | ||| || ||| |
Sbjct 652 GGGATCCCTTCCTTATCCTGAATTTTGGCTTTGACATTGTCAATGGTGTCAGAGCT---T 708
Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| || || |||||||| ||||| || || |||||||| ||||||||
Sbjct 709 TCCACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 761
>seq68470
Length=2690
Score = 152 bits (168), Expect = 1e-31
Identities = 163/213 (77%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || |||||||| ||||| |||| || ||| | || ||
Sbjct 1330 AGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCTAAAGTACGGCCATCC 1271
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || |||||||| || |||||||| ||||| || || || ||||| || |||
Sbjct 1270 TCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCC 1211
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526
||||||||||| || ||||| || | ||||| || | || ||||| || ||||||||
Sbjct 1210 TGAATCTTTGCCTTAACATTATCAATAGTATCTG-AGCTCTCCACCTCCAGAGTAATAGT 1152
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| ||||| | || || ||||||||||||||
Sbjct 1151 CTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 1119
Score = 116 bits (128), Expect = 8e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | ||| || ||||| | || || || ||||| || || || ||
Sbjct 436 ATGCCTCCGCGTAGACGAAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTGTAATCG 377
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | || | ||||| || || ||||||||||| || || |||||||| || || ||
Sbjct 376 GCCAAGGTGCGGCCGTCCTCGAGCTGTTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGG 317
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| ||||| || || || |||||||| || || || || || | ||| ||| || | ||
Sbjct 316 GGAATTCCCTCCTTGTCTTGAATCTTCGCCTTGACGTTGTCGATGGTGTCG-GAGCTCTC 258
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || |||||||| || || || || ||||| || || ||||||||
Sbjct 257 GACTTCGAGAGTAATAGTTTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 207
Score = 116 bits (128), Expect = 8e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || || | || || ||||| | || || || ||||| || ||||| ||
Sbjct 1120 ATACCACCCCTCAGGCGCAGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCC 1061
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| ||||| || || || || || ||||| ||||| || || | | ||| ||||| ||
Sbjct 1060 GCAAGAGTCCTTCCATCCTCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGT 1001
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| |||||||| ||||| || || ||||| || ||||| || | || || || | ||
Sbjct 1000 GGAATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTG-AGCTCTC 942
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | ||||| || || |||||||| || || ||||||||||||||
Sbjct 941 AACTTCCAAAGTAATTGTTTTCCCAGTAAGGGTCTTAACAAATATCTGCAT 891
Score = 93.3 bits (102), Expect = 1e-13
Identities = 136/190 (72%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| | || || || ||||| || || || || | | || | |||||
Sbjct 191 AAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCGTC 132
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || ||||||||||| || |||||||| || || || || ||||| || || ||
Sbjct 131 CTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCGGAATTCCCTCCTTGTC 72
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
|| ||||| || ||||| || || | ||| || | || | || || || || |||||||
Sbjct 71 TTGGATCTTGGCCTTTACGTTGTCGATGGTGTC-CGAGCTCTCGACTTCGAGAGTAATAG 13
Query 104526 TCTTACCAGT 104535
| || || ||
Sbjct 12 TTTTGCCGGT 3
>seq68514
Length=8688
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || || ||||| ||||| |||| || ||| | || ||
Sbjct 8656 AGGACAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCAGCTAAAGTACGGCCATCC 8597
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || |||||||| || |||||||| |||||||| || || ||||| ||||||
Sbjct 8596 TCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGAATCCCTTCCTTATCC 8537
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| || || ||||| || | |||||| | || ||||| || ||||| ||
Sbjct 8536 TGAATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCCACCTCCAGGGTAATTGTT 8477
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| |||||||| || || || || ||||||||
Sbjct 8476 TTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 8445
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || || || || ||||| |||| || || | |||||
Sbjct 1260 AGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCCGTCC 1201
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
||||| || || ||||| || || |||||||| ||||| || || || ||||| || |||
Sbjct 1200 TCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCC 1141
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
||||||||||| || ||||| || | ||||| | || ||||| || |||||||||
Sbjct 1140 TGAATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAATAGTC 1081
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| | || || ||||| || |||||
Sbjct 1080 TTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 1049
Score = 131 bits (144), Expect = 4e-25
Identities = 171/234 (73%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | ||||| || || ||||| || || |||||||| ||||| || || ||
Sbjct 8218 ATTCCACCACGAAGCCTGAGGACAAGATGCAAAGTGGATTCTTTTTGAATGTTGTAATCG 8159
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | ||| | |||||||| ||||| || || ||||| || || | ||| || || ||
Sbjct 8158 GCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCCGGC 8099
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| ||||| || || ||||| ||||| || || || || || | || ||| || | ||
Sbjct 8098 GGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCGG-AGCTCTC 8040
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || || || || ||||| || || || ||||| |||||||||||||| ||
Sbjct 8039 CACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTTTTCACAAATATCTGCATCTT 7986
>seq43778
Length=4696
Score = 149 bits (164), Expect = 1e-30
Identities = 173/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || || | |||||| | ||| | || ||||| ||||| || || |||||
Sbjct 3730 ATACCACCCCTGAGACGAAGTACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCT 3789
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || || || |||||||| |||||||| || ||||| || || || ||
Sbjct 3790 GCAAGTGTGCGTCCATCCTCAAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGT 3849
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAG-GTTC 104508
|| || ||||| ||||||||||| || ||||| ||||| || | ||| || | || |||
Sbjct 3850 GGGATCCCTTCCTTATCCTGAATTTTGGCTTTGACATTGTCAATGGTGTC-CGAGCTTTC 3908
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| ||||| ||||| || || |||||||| || |||||
Sbjct 3909 CACCTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTTACAAAGATTTGCAT 3959
Score = 141 bits (156), Expect = 2e-28
Identities = 152/200 (76%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||||| |||||| | || ||||| |||||||| |||
Sbjct 3535 GTTGACTCCTTCTGGATGTTGTAGTCAGCTAGAGTACGGCCATCTTCAAGTTGTTTGCCA 3594
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | ||||| ||||| ||||| || || || || ||||||||||| || ||
Sbjct 3595 GCAAAGATCAATCTCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTG 3654
Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539
||||| || | || || ||| ||| ||||| | || ||||| |||||||| ||
Sbjct 3655 ACATTGTCGATTGTGTCAGAGCT---TTCAACCTCCAAAGTTATAGTTTTACCAGTCAGG 3711
Query 104540 GTTTTTACAAATATCTGCAT 104559
||||| ||||| ||||||||
Sbjct 3712 GTTTTCACAAAAATCTGCAT 3731
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||||||||| ||||| | || || || || ||||| || || || |||
Sbjct 3307 GTGGACTCCTTCTGAATATTGTAGTCGGCGAGGGTCCTTCCATCTTCAAGCTGCTTACCA 3366
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || |||||||| || ||||| || || ||||| || || |||||||| |||||
Sbjct 3367 GCAAAGATAAGCCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCTTGAATCTTAGCTTTA 3426
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||||| | || || |||| ||||| ||||| |||||||| ||
Sbjct 3427 ACATTGTCAATAGTATCCGAACTCTCAACTTCTAAGGTAATGGTCTTGCCAGTAAGAGTC 3486
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 3487 TTAACAAAGATTTGCAT 3503
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| ||||| || | || || ||||| ||||| || || || |||
Sbjct 3079 GTGGACTCCTTCTGAATGTTATAATCTGCAAGGGTCCTACCATCTTCAAGCTGCTTGCCA 3138
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | |||||| || || ||||| || || || ||||| || ||||| || ||
Sbjct 3139 GCAAAAATCAACCTCTGCTGGTCGGGAGGAATGCCCTCCTTATCTTGGATCTTGGCCTTC 3198
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| |||| ||| || | ||| ||||| | || || ||||| ||||| | ||
Sbjct 3199 ACATTATCTATGGTGTCTGAACTTTCCACCTCCAAAGTGATGGTCTTCCCAGTCAAAGTC 3258
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 3259 TTCACAAAGATCTGCAT 3275
>seq68152
Length=1216
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || |||||||| || || |||| ||||| | |||||
Sbjct 950 AGGACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGGCCGTCC 1009
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || ||||| || || |||||||| |||||||| || || ||||| || |||
Sbjct 1010 TCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCC 1069
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| || || ||||| || | |||||| | || ||||| || ||||| |||
Sbjct 1070 TGAATCTTGGCCTTGACATTGTCAATGGTATCCGAACTCTCCACCTCCAGGGTAATCGTC 1129
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || | ||| || ||||| ||||||||
Sbjct 1130 TTCCCGGTCAATGTCTTGACAAAAATCTGCAT 1161
>seq43779
Length=2831
Score = 141 bits (156), Expect = 2e-28
Identities = 146/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| || || ||||| | || || | ||| || || |||||||| |||||||||
Sbjct 1 TCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAA 60
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| ||||| || || || || || |||||||| || ||||||||||| ||||| |||||
Sbjct 61 ATAAGCCTTTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTGGCTTTGACATTG 120
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | || ||| ||| ||||| || || ||||| || ||||| || || ||||||
Sbjct 121 TCAATAGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTTACA 180
Query 104549 AATATCTGCAT 104559
|| ||||||||
Sbjct 181 AAGATCTGCAT 191
Score = 96.9 bits (106), Expect = 8e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || ||||| || || || |||| ||||| || || ||
Sbjct 2665 AGCACAAGATGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTTCCATCC 2724
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| ||||| ||||||||||| || | |||||| || || || || || || || ||||||
Sbjct 2725 TCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTATCC 2784
Query 104468 TGAATCTTTGCTTTTACATTTTC 104490
|| ||||| || || ||||| ||
Sbjct 2785 TGGATCTTAGCCTTAACATTGTC 2807
>seq68153
Length=714
Score = 140 bits (154), Expect = 7e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || |||||||| || || |||| ||||| | |||||
Sbjct 74 AGGACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGCCCGTCC 133
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || ||||| || || |||||||| |||||||| || || ||||| || |||
Sbjct 134 TCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCC 193
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| || || || || || | |||||| | || ||||| || ||||| |||
Sbjct 194 TGAATCTTGGCCTTGACGTTGTCAATGGTATCCGAACTCTCCACCTCCAGGGTAATCGTC 253
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || | ||| || ||||| ||||||||
Sbjct 254 TTCCCGGTCAATGTCTTGACAAAAATCTGCAT 285
Score = 102 bits (112), Expect = 2e-16
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | || ||||| |||||||| || || || | || || || || || ||
Sbjct 305 ACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCAAGCGTCCTTCCATCCTCC 364
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
|| || || ||||| || || | | ||| || || || || || ||||| || |||||
Sbjct 365 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGG 424
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTT 104529
||||| || || || || || | || ||| || | || || || ||||| || |||||
Sbjct 425 ATCTTGGCCTTGACGTTGTCGATCGTGTCGG-AGCTCTCAACTTCGAGTGTGATCGTCTT 483
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || ||||| || |||||||||||
Sbjct 484 TCCCGTTAGGGTTTTGACGAATATCTGCAT 513
>seq68490
Length=1318
Score = 122 bits (134), Expect = 2e-22
Identities = 139/187 (74%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || ||||| || || || ||||| |||| || || | || ||
Sbjct 187 AGGACGAGATGGAGGGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCCATCC 128
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || ||||| || || |||||||| ||||| || || || ||||| ||||||
Sbjct 127 TCCAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTATCC 68
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
||||||||||| || ||||| || | ||||| | || ||||| || |||||||||
Sbjct 67 TGAATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAATAGTC 8
Query 104528 TTACCAG 104534
|| ||||
Sbjct 7 TTCCCAG 1
>seq24834
Length=3164
Score = 107 bits (118), Expect = 4e-18
Identities = 167/239 (70%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 104324 TTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTA 104383
||| | || || || || ||||| || | | ||| | || |||||||||||||||||
Sbjct 469 TTAATGATACCTCCCCTAAGCCTCAGCATCAAATGAAGAGTGGATTCTTTCTGAATATTG 410
Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443
|| |||| | ||| | ||| ||||| || || ||| || || || || || |||
Sbjct 409 TAATCAGCCAAAGTACGACCATCTTCGAGCTGCTTTTCAATGAAGATGAGATGCTTATGA 350
Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503
|| || || |||||||| || || |||||||| ||||| ||||| || | ||| | | |
Sbjct 349 TCCGGGGGAATTCCTTCCTTGTCTTGAATCTTAGCTTTGACATTGTCGATGGTGTTGTTG 290
Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| | || || || || ||||| | || || ||||| || || || ||||| ||
Sbjct 289 CTCTCAGCTTCAAGAGTTATGGTCTTTTCGGTTAGGGTTTTCACTAAGATATGCATCTT 231
>seq109229
Length=2153
Score = 102 bits (112), Expect = 2e-16
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || || ||||| || || | || | ||| || || |||||||| ||||| ||||
Sbjct 377 TTCCTCCCCTGAGCCTCAGGACCAAGTGAAGTGTTGACTCCTTCTGAATGTTATAATCAG 436
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
||||| | || ||||| | |||||| ||||||||||| | ||||| ||||| ||||
Sbjct 437 CAAGAGTACGGCCATCTTCCAATTGTTTCCCAGCAAAAATCAATCTCTGCTGATCCGGAG 496
Query 104451 GTATTCCTTCTTTATCCTG 104469
| || ||||| || |||||
Sbjct 497 GAATGCCTTCCTTGTCCTG 515
>seq72069
Length=2032
Score = 98.7 bits (108), Expect = 2e-15
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || || ||||| || || | || | || || || || ||||| ||||| || |
Sbjct 328 TTCCTCCCCTGAGCCTCAGGACCAAGTGAAGCGTCGACTCCTTTTGAATGTTATAATCTG 269
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
|| ||||| || ||||| | |||||| ||||||||||| || ||||| ||||| ||||
Sbjct 268 CAAGCGTTCTGCCATCTTCCAATTGTTTACCAGCAAAAATCAGTCTCTGCTGATCCGGAG 209
Query 104451 GTATTCCTTCTTTATCCTG 104469
| || ||||| || |||||
Sbjct 208 GAATGCCTTCCTTGTCCTG 190
>seq43798
Length=861
Score = 96.9 bits (106), Expect = 8e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || ||||| || || || |||| ||||| || || ||
Sbjct 695 AGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTTCCATCC 754
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| ||||| ||||||||||| || | |||||| || || || || || || || ||||||
Sbjct 755 TCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCGGGTGGAATCCCCTCCTTATCC 814
Query 104468 TGAATCTTTGCTTTTACATTTTC 104490
|| ||||| || || ||||| ||
Sbjct 815 TGGATCTTAGCCTTCACATTGTC 837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1147880155385504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |