Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq68470 143 3e-29 seq68153 129 6e-25 seq13742 127 2e-24 seq71848 120 3e-22 seq68514 120 3e-22 seq11653 109 5e-19 seq49145 100 3e-16 seq68152 96.9 3e-15 seq43778 96.9 3e-15 seq77946 86.0 6e-12 seq99008 84.2 2e-11 seq43799 82.4 7e-11 >seq68470 Length=2690 Score = 143 bits (158), Expect = 3e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||| || || | ||| | ||| |||||||| || |||||||||||| Sbjct 434 GCCTCCGCGTAGACGAAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTGTAATCGGC 375 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| |||||| ||||| || || ||| |||| | | |||||||||||| || Sbjct 374 CAAGGTGCGGCCGTCCTCGAGCTGTTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGGGG 315 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| || ||||| || ||| ||||| | || | || |||| | ||||| Sbjct 314 AATTCCCTCCTTGTCTTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGAC 255 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 |||| |||| ||||| ||||| || ||||| ||||| ||||||||| || Sbjct 254 TTCGAGAGTAATAGTTTTGCCGGTCAGGGTTTTCACGAAGATCTGCATGCCT 203 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || || | ||| | ||| |||||||| || || |||||||| || |||||| ||| Sbjct 646 AGAACGAGATGAAGGGTTGACTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCT 587 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || || |||||||| || |||| | | |||||||||||| |||||||| || ||||| Sbjct 586 TCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCT 527 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 || ||| ||||| | || | || || | | ||| | |||| ||| | || Sbjct 526 TGAATCTTCGCCTTGACGTTATCGATCGTGTCTGAGCTCTCAACCTCGAGGGTGATCGTC 467 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || |||||||| ||||| || || ||||||||| || Sbjct 466 TTCCCGGTTAGGGTTTTGACAAAGATCTGCATGCCT 431 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || ||||| || | ||| | |||||||||||| || ||||| ||||| | | Sbjct 1117 CCACCCCTCAGGCGCAGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTATAATC-CGC 1059 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || | ||||| ||||| ||||| ||| |||| ||||||||||| ||||| || Sbjct 1058 AAGAGTCCTTCCATCCTCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGTGG 999 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| || || |||||| ||||| | || | || || | | ||| | Sbjct 998 AATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTCTCAAC 939 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | |||| ||||| || || || || || || || ||||||||| || Sbjct 938 TTCCAAAGTAATTGTTTTCCCAGTAAGGGTCTTAACAAATATCTGCATGCCT 887 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||| || || | ||| | ||| |||||||| || |||||||||||| Sbjct 206 GCCTCCGCGGAGACGAAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGC 147 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| |||||| |||||||| || || |||| | | |||||||||||| || Sbjct 146 CAAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCGG 87 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| || ||||| ||| || ||| | | || | || || | | ||||| Sbjct 86 AATTCCCTCCTTGTCTTGGATCTTGGCCTTTACGTTGTCGATGGTGTCCGAGCTCTCGAC 27 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 |||| |||| ||||| ||||| Sbjct 26 TTCGAGAGTAATAGTTTTGCCGGT 3 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||| |||||||||||||||||| || |||||| || || | |||||| || Sbjct 859 GTTGACTCTTTTTGAATGTTGTAATCGGCCAAGGTGCGGCCATCTTCCAACTGCTTACCG 800 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || | ||||||||||| ||||| || |||||||| ||| || |||| Sbjct 799 GCGAAGATCAATCTTTGCTGGTCCGGCGGGATCCCCTCTTTGTCCTGGATCTTGGCCTTG 740 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||||| | ||| | || | || | || || || ||||| ||| Sbjct 739 ACGTTATCAATCGTATCCGAACTCTCCACCTCCAGAGTGATCGTCTTCCCAGTTAGGGTT 680 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 679 TTGACGAAGATCTGCAT 663 >seq68153 Length=714 Score = 129 bits (142), Expect = 6e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | || ||||| ||| | ||| | || || ||||| |||||||||||||| | Sbjct 286 GCCACCCCTCAGACGCAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATC-CG 344 Query 131067 CATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 || | || | ||||| ||||||||||| ||| |||| ||||||||||||||||| | Sbjct 345 CAAGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCG 404 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 | || ||||| ||||| ||| || ||||| | || | || |||| | ||| | Sbjct 405 GAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCAA 464 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | || || || ||||| ||||| ||||| ||||||||| Sbjct 465 CTTCGAGTGTGATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCATG 514 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || |||||||| |||||||||||||| Sbjct 59 CCACCACGGAGACGGAGGACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCA 118 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || ||| |||||| |||||||| || ||| |||| | | |||||| || || ||| Sbjct 119 AGAGTACGCCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGG 178 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||| | || | ||||| | ||| | Sbjct 179 ATCCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTATCCGAACTCTCCACC 238 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||||| || || ||||| | || || || |||||||||||| Sbjct 239 TCCAGGGTAATCGTCTTCCCGGTCAATGTCTTGACAAAAATCTGCATG 286 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| ||||| | || | || || ||||| || || ||||||||| Sbjct 514 GCCCCCACGGAGACGAAGCACGAGGTGAAGAGTTGATTCCTTCTGGATATTGTAATCGGC 573 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| |||||| || ||||| || ||| |||| | | |||||||||||| || Sbjct 574 CAAGGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGG 633 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||||| | || | || |||| | ||| | Sbjct 634 AATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAAC 693 Query 131187 GTCGACGGTAACGGTTTTACC 131207 |||| |||| ||| || || Sbjct 694 TTCGAGAGTAATGGTCTTGCC 714 >seq13742 Length=406 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||| || || | || | ||||||||||| || ||||||||||| Sbjct 139 GCCGCCGCGGAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 198 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||||| |||||| |||||||| || ||| |||| | |||||||||||||| || Sbjct 199 CAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGG 258 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||||| | || | || ||| | ||| | Sbjct 259 AATCCCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCGAAGCTCTCCAC 318 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| | |||||| || || |||||||| Sbjct 319 CTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCAT 366 >seq71848 Length=4061 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 |||| ||| | || | || || ||||| || ||||| |||||| || |||||| | Sbjct 3814 CGCAACACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGCCAGGGTGCGGCCG 3873 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| |||| | | |||||||||||| ||||| ||||| ||| Sbjct 3874 TCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCTTCCTTG 3933 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| ||| ||| | | || | || |||| | ||| | || | ||| | Sbjct 3934 TCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTGATC 3993 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || ||||| ||||| || ||||| ||||||||| Sbjct 3994 GTCTTCCCGGTCAGAGTCTTGACGAAGATCTGCATG 4029 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || |||||||||||||||||||||||| Sbjct 3574 CCACCACGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCG 3633 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||||||||| ||| |||| | | ||||||||||||||| Sbjct 3634 AGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 3693 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| ||| || ||| | | || | || |||| | ||| | Sbjct 3694 ATCCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCCACC 3753 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || ||||| | || || ||||| |||||||| Sbjct 3754 TCCAGGGTGATCGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCAT 3800 >seq68514 Length=8688 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | | || || | ||| | ||| || || ||||| |||||||||||| Sbjct 820 GCCACCACGGAGCCTGAGGACAAGATGCAAGGTGGATTCTTTTTGGATGTTGTAATCGGC 761 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||| || ||| || || ||||| || ||| |||| | | ||||||||| ||||| Sbjct 760 CAAGGTCCGGCCGTCTTCGAGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGG 701 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||| || ||||| ||| || ||| | | || | || |||| | ||||| Sbjct 700 GATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTCTCGAC 641 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||||| || || ||||| || ||||| ||||| ||||||||| Sbjct 640 CTCGAGGGTAATCGTCTTCCCGGTCAGGGTTTTGACGAAGATCTGCATG 592 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||||||| || |||||| || || || ||||| || Sbjct 561 GTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCG 502 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | ||||||||| ||||||||||| || || ||||| ||| || |||| Sbjct 501 GCGAAGATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTG 442 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | | ||| | |||| || | ||||| |||||||| ||| Sbjct 441 ACGTTGTCGATGGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTT 382 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 381 TTCACGAAGATCTGCAT 365 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || || |||||||||||||||||| || ||||| ||| || || ||||| || Sbjct 8185 GTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCG 8126 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| | ||||||||||||||| || ||||| || ||||| ||| || |||| Sbjct 8125 GCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTG 8066 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| | ||| | |||| ||| | || || ||||| || ||| Sbjct 8065 ACGTTGTCGATTGTGTCGGAGCTCTCCACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTT 8006 Query 131218 TTTACGAAAATCTGCAT 131234 || || || |||||||| Sbjct 8005 TTCACAAATATCTGCAT 7989 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || ||||| ||| | ||| | ||||||||||| |||||||||||||| | | Sbjct 8443 CCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATC-CGC 8385 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || | ||||| |||||||| ||||| |||| | |||||||| || || || Sbjct 8384 AAGCGTCCTTCCATCCTCCAGCTGCTTCCCTGCAAAGATCAGGCGCTGCTGATCAGGTGG 8325 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| |||||| ||||| | || | || || | | ||||| Sbjct 8324 GATCCCTTCCTTGTCCTGGATTTTTGCCTTGATGTTGTCAATGGTGTCAGAGCTCTCGAC 8265 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || ||||| ||||| |||||||| Sbjct 8264 TTCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCAT 8217 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 ||||| || | ||| || || | ||| | ||| ||||||||||||||||| ||||| ||| Sbjct 8671 CCACCACGAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCAGCT 8612 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||||| |||||||| || || |||| | | |||||| || || || Sbjct 8611 -AAAGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGG 8553 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| || || || || ||||| | || | ||||| | ||| | Sbjct 8552 AATCCCTTCCTTATCCTGAATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCCAC 8493 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||||| || || ||||| || |||||||||||||| Sbjct 8492 CTCCAGGGTAATTGTTTTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 8445 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| ||||||||||| ||||| ||||| Sbjct 1275 CCACCACGAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCA 1216 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||||||||||||| || ||| |||| | | |||||| || || || Sbjct 1215 AGGGTACGGCCGTCCTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCTGGTGGA 1156 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| | | || ||||| | || | ||||| | ||| | Sbjct 1155 ATCCCTTCCTTGTC-CTGAATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCAC 1097 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | |||| || || || || | ||| || || ||||| |||||| || Sbjct 1096 CTCCAGAGTAATAGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCATGCCT 1045 >seq11653 Length=224 Score = 109 bits (120), Expect = 5e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||| || || | || | ||||||||||| || ||||||||||| Sbjct 187 GCCGCCGCGGAGACGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 128 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||||| |||||| |||||||| || ||| |||| | |||||||||||||| || Sbjct 127 CAAGGTGCGCTCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGTCGCTGCTGGTCCGGTGG 68 Query 131127 GATTCCTTCTTTGTC 131141 || ||||| ||||| Sbjct 67 AATCCCTTCGTTGTC 53 >seq49145 Length=1022 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||| | | ||| || || | || | ||||||||||| || ||||||||||| Sbjct 873 GCCGCCGTGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 814 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||||| |||||| |||||||| || ||| |||| | ||||||||||| || || Sbjct 813 CAAGGTGCGCCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAGCCGCTGCTGGTCTGGTGG 754 Query 131127 GATTCCTTCTTTGTC 131141 || ||||| ||||| Sbjct 753 AATCCCTTCCTTGTC 739 >seq68152 Length=1216 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || |||||||| |||||||||||||| Sbjct 935 CCACCACGGAGACGGAGGACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCA 994 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| |||| | | |||||| || || ||| Sbjct 995 AGAGTACGGCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGG 1054 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||| | || | ||||| | ||| | Sbjct 1055 ATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATGGTATCCGAACTCTCCACC 1114 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||||| || || ||||| | || || || |||||||||||| Sbjct 1115 TCCAGGGTAATCGTCTTCCCGGTCAATGTCTTGACAAAAATCTGCATG 1162 >seq43778 Length=4696 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | | ||| || || || || | |||||||||||| || ||||| |||||| Sbjct 3960 GCCACCCCTAAGACGAAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGC 4019 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||||| ||||| ||||| || || || |||| | | |||||| || || || Sbjct 4020 GAGGGTGCGCCCATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGG 4079 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || |||| | || | ||||| | | || | Sbjct 4080 AATCCCTTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCAAC 4139 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| ||||| ||||| || || || || ||||| Sbjct 4140 CTCAAGGGTTATGGTTTTTCCGGTGAGAGTCTTCACAAAGATTTGCAT 4187 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | ||||| || |||||||| || || ||||| || | Sbjct 2593 CCACCACGCAGGCGAAGGACAAGATGTAAAGTAGACTCCTTCTGGATATTGTAGTCAGCC 2652 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || ||| ||||| |||||||| || || | || || | |||||| || ||||| Sbjct 2653 AAAGTACGCCCATCCTCCAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGATCTGGAGGA 2712 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| ||| | | || | || || | ||| | Sbjct 2713 ATCCCTTCCTTGTCCTGGATTTTAGCCTTCACATTATCAATGGTGTCTGAACTCTCAACC 2772 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| || || | || || |||||||||||||| Sbjct 2773 TCCAGGGTGATGGTTTTTCCTGTCAATGTCTTCACGAAAATCTGCAT 2819 >seq77946 Length=1578 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | || ||||||||||| |||||||| ||| Sbjct 1429 GCCACCACGGAGACGGAGGACGAGGTGGAGTGTTGACTCCTTTTGGATGTTGTAGTCGGC 1488 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | |||||| |||||||| || ||| |||| | ||||||||||||||| || Sbjct 1489 TAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 1548 Query 131127 GATTCCTTCTTTGTC 131141 || || || || || Sbjct 1549 AATCCCCTCCTTATC 1563 >seq99008 Length=1232 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||||||||| |||||||| ||| | ||| | |||||| |||||||| || Sbjct 10 GTTGACTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCG 69 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| |||| | ||||||||||||||| || || || || ||||| Sbjct 70 GCGAAGATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTC 113 >seq43799 Length=2218 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||| |||||||| || |||||||| || Sbjct 307 CCACCACGGAGACGAAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCA 366 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || || || ||||| || ||||||| | ||| || || || ||| Sbjct 367 AGAGTACGACCATCTTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGGG 426 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | | || | Sbjct 427 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTTTCAACC 486 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | || ||||| || || ||||| || |||||||||||| Sbjct 487 TCCAAAGTTATAGTCTTACCAGTCAGGGTTTTCACAAAAATCTGCATG 534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470605682641920