Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq68514 138 1e-27 seq208088 122 8e-23 seq71848 116 3e-21 seq13742 113 4e-20 seq43799 111 1e-19 seq43778 109 5e-19 seq43779 104 2e-17 seq68470 102 7e-17 seq68153 91.5 1e-13 seq9721 91.5 1e-13 seq24834 86.0 5e-12 >seq68514 Length=8688 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| || || | ||||| || | ||||| ||||||||||| || Sbjct 7989 ATGCAGATATTTGTGAAAACCCTCACCGGCAAGACAATCACCCTCGAAGTGGAGAGCTCC 8048 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || ||||| || ||||| Sbjct 8049 GACACAATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGACCAG 8108 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || |||||||| || ||| | ||||| | |||||| ||| ||||||||| Sbjct 8109 CAGCGTCTCATCTTTGCCGGGAAGCAACTCGAAGACGGCCGCACTTTGGCCGATTACAAC 8168 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||||||||||||||| | ||| | || || ||||| | || |||| Sbjct 8169 ATTCAAAAAGAATCCACTTTGCATCTTGTCCTCAGGCTTCGTGGTGGAA 8217 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | ||||| ||| | ||||| ||||||||||| ||| Sbjct 365 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACGATCACTCTCGAAGTGGAGAGCTCT 424 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || ||||| || || || || Sbjct 425 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGATCAG 484 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||| || ||| | ||||||| ||||| ||| ||||||||| Sbjct 485 CAGCGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTACAAC 544 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || || || ||||| || | ||||| ||||| Sbjct 545 ATCCAGAAGGAGTCAACGCTCCACCTCGTGCTCAGGCT 582 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || ||||||| || | || || |||| || ||| || Sbjct 593 ATGCAGATCTTCGTCAAAACCCTGACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTCC 652 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | || ||||| || ||| ||||| || || || || || ||||| Sbjct 653 GACACGATCGA-TAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCA 711 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || ||||| || ||| | ||||| | || || ||| ||||||||| Sbjct 712 GCAGAGGCTGATCTTCGCCGGAAAGCAACTCGAAGACGGCCGGACCTTGGCCGATTACAA 771 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || |||||||||||||| | ||| | || || ||||| Sbjct 772 CATCCAAAAAGAATCCACCTTGCATCTTGTCCTCAGGCT 810 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| || || | || || | || |||||| ||| Sbjct 1049 ATGCAAATTTTTGTCAAGACTTTGACTGGGAAGACTATTACTCTGGAGGTGGAGAGTTCT 1108 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| | ||||| | ||| ||||| |||||||||||||| || Sbjct 1109 GATACAATTGATAATGTCA---AGGCAAAGATTCA-GGACAAGGAAGGGATTCCACCAGA 1164 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||| || | || || || || || || |||| || | || || | | ||||| Sbjct 1165 TCAGCAGAGGCTCATCTTCGCTGGGAAGCAGCTAGAGGACGGCCGTACCCTTGCTGATTA 1224 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||| || ||||| || ||| | || || Sbjct 1225 TAACATCCAAAAGGAGTCCACCCTCCATCTTGTCCT 1260 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || || ||| | || || | || |||||| ||| Sbjct 8445 ATGCAGATTTTCGTCAAGACTCTTACTGGGAAAACAATTACCCTGGAGGTGGAGAGTTCT 8504 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || | || || | ||| || || ||||||||||||||||| Sbjct 8505 GATACCATTGA--CAATGTCAAGGCTAAGATTCAG-GATAAGGAAGGGATTCCACCTGAT 8561 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | || ||||| || || || | || |||| || ||| | | ||||| Sbjct 8562 CAGCAGAGGCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGTACTTTAGCTGATTAT 8621 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || |||||||| || ||||| || ||| | || || Sbjct 8622 AACATTCAAAAGGAGTCCACCCTCCATCTTGTCCT 8656 >seq208088 Length=533 Score = 122 bits (134), Expect = 8e-23 Identities = 168/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | || || || | ||||| | || ||||| || Sbjct 347 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCC 288 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || |||| |||| ||| ||||| |||||||| ||||| ||| Sbjct 287 GACACCATTGA--CAATGTCAAAGCCAAAATTCA-GGACAAGGAAGGGATCCCACCAGAC 231 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || |||||||||| ||||||||| | || |||| ||||| | | ||| || Sbjct 230 CAGCAAAGGCTTATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACCCTTGCCGACTAT 171 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || ||||| || || ||||| || || | || || | |||||||| |||| Sbjct 170 AACATTCAGAAGGAGTCCACACTCCACCTGGTCCTCCGTCTAAGAGGTGGAA 119 >seq71848 Length=4061 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| ||||||| || | ||||| | || |||||| || Sbjct 4028 ATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCC 3969 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| |||||||| || || ||||| Sbjct 3968 GACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGGATCCCCCCGGACCAG 3909 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || || |||||||| || | || || | ||||| ||| |||||| || Sbjct 3908 CAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGATTATAAC 3849 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || || || ||||||||||| || | ||| | | || || ||||||| Sbjct 3848 ATCCAGAAGGAATCCACGCTCCACCTTGTGTTGCGCCTGAGGGGAGGAA 3800 >seq13742 Length=406 Score = 113 bits (124), Expect = 4e-20 Identities = 153/210 (73%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 24995 AACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053 |||| ||||| || ||||| || ||||||||||| || ||||||| |||| |||||| Sbjct 371 AACAGATGCAGATCTTTGTGAAAACTTTGACCGGCAAGACCATCACTCTCGAGGTGGAGA 312 Query 25054 CGTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 | ||||| ||||| || || ||| || ||| ||||| |||||||||||||| Sbjct 311 GCTTCGACACGATCGA--CAATGTCAAGGCTAAGATCCAGGACAAGGAAGGGATTCCACC 254 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 ||||| |||||| | || || ||||| || || | || || | ||||| ||| || Sbjct 253 GGACCAGCAGCGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCGGA 194 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACA 25201 |||||| || || || || || || || || Sbjct 193 TTACAACATCCAGAAGGAGTCGACTCTCCA 164 >seq43799 Length=2218 Score = 111 bits (122), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || |||| ||||| | || || | || || || ||| Sbjct 533 ATGCAGATTTTTGTGAAAACCCTGACTGGTAAGACTATAACTTTGGAGGTTGAAAGCTCT 474 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || || |||||||| | Sbjct 473 GACACGATCGA--CAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCTGATC 416 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| || | || ||||||||||||||| | ||||||| ||| ||| | | || |||| Sbjct 415 AACAGAGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGTCGTACTCTTGCTGACTACA 356 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || || || || || || || ||||| ||||| Sbjct 355 ACATCCAGAAGGAGTCAACCCTCCATTTGGTGCT 322 Score = 109 bits (120), Expect = 5e-19 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | || || || | ||||| | || ||||| ||| Sbjct 761 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCT 702 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || |||| |||| ||| || || |||||||| ||||| ||| Sbjct 701 GACACCATTGA--CAATGTCAAAGCCAAAATTCA-GGATAAGGAAGGGATCCCACCAGAC 645 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | || |||||||| |||||| |||| |||| ||||| | | || ||| Sbjct 644 CAGCAAAGGCTCATCTTTGCCGGTAAACAACTAGAGGATGGACGCACACTTGCAGACTAC 585 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || ||||| || || Sbjct 584 AACATCCAGAAGGAATCAACCCTTCATTTGGTCCT 550 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | || || || | || || | || ||||| || Sbjct 989 ATGCAGATCTTTGTAAAGACCCTCACTGGCAAGACGATTACTCTTGAGGTGGAAAGCTCC 930 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || |||| || | ||| ||||| |||||||| ||||| ||| Sbjct 929 GACACCATTGA--CAATGTGAAAGCCAAGATTCA-GGACAAGGAAGGGATCCCACCAGAC 873 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || |||| |||||||| ||||| | || |||| |||||| | | ||||| Sbjct 872 CAGCAGAGGCTTATCTTTGCCGGTAAACAGCTCGAGGATGGTCGCACACTTGCTGATTAT 813 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || || || || || Sbjct 812 AACATCCAGAAGGAGTCAACCCTCCACTTGGTCCT 778 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | || || ||| | || || | || || || ||| Sbjct 305 ATGCAGATCTTTGTGAAAACCCTCACTGGAAAAACAATTACTCTTGAGGTTGAAAGTTCT 246 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || ||||||||| ||| ||||| || || || ||||| || Sbjct 245 GACACCATCGA--CAATGTGAAAGCAAAAATTCAA-GACAAGGAGGGTATCCCACCAGAT 189 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | |||||||| || || || | ||||||| | ||| | | || || Sbjct 188 CAGCAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTAT 129 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || ||||||||||| || || || || || Sbjct 128 AACATCCAGAAAGAATCCACTCTTCACTTGGTTCT 94 >seq43778 Length=4696 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| ||||| || ||| ||||||| | || || ||| || Sbjct 2820 AATGCAGATTTTCGTGAAGACATTGACAGGAAAAACCATCACCCTGGAGGTTGAGAGTTC 2761 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || ||||| |||||| ||||| ||||||||||| || || || Sbjct 2760 AGACACCATTGATAATGTGAAGGCTAAAATCCAGGACAAGGAAGGGATTCCTCCAGATCA 2701 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | ||||||||||| || || | || |||| || ||| ||| || ||||| Sbjct 2700 GCAGAGGTTGATTTTTGCCGGGAAGCAGCTGGAGGATGGGCGTACTTTGGCTGACTACAA 2641 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || || || ||||| | || || Sbjct 2640 TATCCAGAAGGAGTCTACTTTACATCTTGTCCT 2608 Score = 105 bits (116), Expect = 6e-18 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | || || || |||| || | ||||| ||| || Sbjct 3503 ATGCAAATCTTTGTTAAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCG 3444 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| || || || |||| || | ||| ||||| ||||| || || |||||| Sbjct 3443 GATACTATTGA--CAATGTTAAAGCTAAGATTCAA-GACAAGGAAGGCATCCCGCCTGAC 3387 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || |||| ||||| || || || | ||||||| | || | | ||| ||| Sbjct 3386 CAGCAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGAAGGACCCTCGCCGACTAC 3327 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| || || ||||| || || || || || Sbjct 3326 AATATTCAGAAGGAGTCCACTCTTCACTTGGTCCT 3292 Score = 105 bits (116), Expect = 6e-18 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||||||||| | || || || |||| || | || ||||| || Sbjct 3959 ATGCAAATCTTTGTAAAGACCCTCACTGGAAAGACCATTACCCTTGAGGTGGAAAGCTCG 3900 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || |||| |||| ||| || || |||||||| ||||| ||| Sbjct 3899 GACACCATTGA--CAATGTCAAAGCCAAAATTCA-GGATAAGGAAGGGATCCCACCAGAC 3843 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | || ||||| ||||||||| | || |||| ||||| | | || ||| Sbjct 3842 CAGCAAAGGCTCATCTTTGCTGGCAAACAACTTGAGGATGGACGCACACTTGCAGACTAC 3783 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || ||||| || || Sbjct 3782 AACATCCAGAAGGAATCAACCCTTCATTTGGTACT 3748 Score = 100 bits (110), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | ||||| ||| |||| || | || || || ||| Sbjct 4187 ATGCAAATCTTTGTGAAGACTCTCACCGGAAAAACCATAACCCTTGAGGTTGAAAGCTCT 4128 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| |||| || | || ||||| |||||||||||||| || Sbjct 4127 GATACCATTGATAATGTCA---AAGCTAAGATCCAG-GACAAGGAAGGGATTCCACCAGA 4072 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||| || |||| ||||| || ||||| | || |||| ||||| | | |||||| Sbjct 4071 TCAGCAGAGGCTTATCTTTGCTGGTAAACAGCTTGAGGATGGGCGCACCCTCGCCGATTA 4012 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || || || || || Sbjct 4011 TAACATCCAGAAGGAGTCGACCCTGCACTTGGTTCT 3976 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || ||||||| | || ||||| || Sbjct 3275 ATGCAGATCTTTGTGAAGACTTTGACTGGGAAGACCATCACTTTGGAGGTGGAAAGTTCA 3216 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| || || || || ||||| || ||||| Sbjct 3215 GACACCATAGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGACCAG 3156 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | |||||||| ||||| || | ||||||| | | || | | ||||| || Sbjct 3155 CAGAGGTTGATTTTTGCTGGCAAGCAGCTTGAAGATGGTAGGACCCTTGCAGATTATAAC 3096 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || ||||| || || || || || Sbjct 3095 ATTCAGAAGGAGTCCACCCTTCACTTGGTTCT 3064 >seq43779 Length=2831 Score = 104 bits (114), Expect = 2e-17 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | || || ||| | ||||| | || ||||| || Sbjct 191 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAAACTATCACCCTTGAGGTGGAAAGCTCC 132 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || || || |||| || | ||| ||||| ||||| || ||||| ||| Sbjct 131 GACACTATTGA--CAATGTCAAAGCCAAGATTCA-GGACAAGGAAGGAATCCCACCAGAC 75 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || |||||||||| ||||||||| | || |||| |||||| | | || ||| Sbjct 74 CAGCAAAGGCTTATTTTTGCTGGCAAACAACTTGAGGATGGTCGCACACTTGCAGACTAC 15 Query 25176 AATATTCAAAAAGA 25189 || || || || || Sbjct 14 AACATCCAGAAGGA 1 >seq68470 Length=2690 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| ||||| ||||| || || | || || | || |||||| || Sbjct 1119 ATGCAGATATTTGTCAAGACCTTGACTGGGAAGACTATTACTCTGGAGGTGGAGAGCTCA 1178 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || | ||| |||| | ||| ||||| |||||||||||||| || || Sbjct 1179 GATACTATTGATAATGTTAAGGCAAAGATTCAG-GACAAGGAAGGGATTCCACCAGATCA 1237 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||| || || || | || |||| || ||| | | ||||| || Sbjct 1238 GCAGAGGCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGTACTTTAGCTGATTATAA 1297 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || ||||| || ||| | ||||| Sbjct 1298 CATTCAGAAGGAGTCCACCCTCCATCTTGTGCT 1330 Score = 98.7 bits (108), Expect = 9e-16 Identities = 157/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | ||||| || | ||||| |||| || ||| || Sbjct 435 ATGCAGATCTTTGTCAAAACCCTAACCGGGAAGACGATCACCCTCGAGGTTGAGAGCTCA 494 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || | ||| | || | ||| ||||| || || || || || |||| Sbjct 495 GACACGATCGA-TAACGTCAAGGCGAAGATTCAA-GACAAGGAGGGAATCCCCCCGGACC 552 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || | || ||||| ||||| ||| | ||||| | ||||| ||| ||||||| Sbjct 553 AGCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCCGCACCTTGGCTGATTACA 612 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||| || || || || || || ||| | || || ||||| Sbjct 613 ATATCCAGAAGGAGTCAACCCTTCATCTCGTTCTCAGGCT 652 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | || || || | ||||| | || |||||| || Sbjct 663 ATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAGGTGGAGAGTTCG 722 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || | || | ||| || ||| |||||||| ||||| || || ||||| Sbjct 723 GATACGATTGA-TAACGTCAAGGCCAAGATCCAGGACAAAGAGGGGATCCCGCCGGACCA 781 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || | | || || ||||| || || || ||||||| ||||| ||| ||||||||| Sbjct 782 GCAAAGATTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGCACCTTGGCCGATTACAA 841 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||| || || || || | || || | || || ||||| Sbjct 842 CATTCAAAAAGAGTCAACTCTCCACCTTGTTCTTCGTCTCAGGGGAGG 889 >seq68153 Length=714 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| ||||| || || || | || || || | |||||| ||||||| ||| || Sbjct 513 ATGCAGATATTCGTCAAAACCCTAACGGGAAAGACGATCACACTCGAAGTTGAGAGCTCC 454 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| ||||||||||| || ||||| Sbjct 453 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAG 394 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || ||||| || | || |||| | || | | |||||||| Sbjct 393 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGAAGGACGCTTGCGGATTACAAC 334 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208 ||||| || ||||| || || ||| | ||| Sbjct 333 ATTCAGAAGGAATCAACTCTTCATCTGGTG 304 Score = 91.5 bits (100), Expect = 1e-13 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 25033 CCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTG 25092 |||| || ||||||| ||| || ||||| ||||| | ||| || ||| | Sbjct 707 CCATTACTCTCGAAGTTGAGAGCTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGG 648 Query 25093 ACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAG 25152 |||| ||||||||||| || ||||| ||| || | || || ||||| || ||| | || | Sbjct 647 ACAAGGAAGGGATTCCGCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAGCAACTCGAGG 588 Query 25153 ATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | | ||||| ||| |||||||||||| || || ||||| || || || | ||||| Sbjct 587 ACGGCCGCACCTTGGCCGATTACAATATCCAGAAGGAATCAACTCTTCACCTCGTGCT 530 >seq9721 Length=1405 Score = 91.5 bits (100), Expect = 1e-13 Identities = 112/150 (75%), Gaps = 5/150 (3%) Strand=Plus/Plus Query 24995 AACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053 |||| ||||| || ||||| || ||||||||||| || ||||||| |||| |||||| Sbjct 120 AACAGATGCAGATCTTTGTGAAAACTTTGACCGGCAAGACCATCACTCTCGAGGTGGAGA 179 Query 25054 CGTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 || ||||| ||||| || || ||| || ||| ||||| ||||||||||||| Sbjct 180 GCTCCGACACGATCGA--CAATGTCAAGGCTAAGATCCAGGACAAGGAAGGGATTCCACT 237 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAA 25141 ||||| |||||| | || || | ||| || Sbjct 238 GGACCACCAGCGGCTGATCTTCGTCGGAAA 267 >seq24834 Length=3164 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/149 (73%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 25077 AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCC 25136 |||| || | ||| ||||| ||||| ||||| || || || ||| | || || Sbjct 313 AAGCTAAGATTCAA-GACAAGGAAGGAATTCCCCCGGATCATAAGCATCTCATCTTCATT 371 Query 25137 GGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACG 25196 | || || | ||||||| ||| ||| ||| |||||||||||||| ||||||||||| Sbjct 372 GAAAAGCAGCTCGAAGATGGTCGTACTTTGGCTGATTACAATATTCAGAAAGAATCCACT 431 Query 25197 CTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| |||| ||||| || ||||| Sbjct 432 CTTCATTTGATGCTGAGGCTTAGGGGAGG 460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432068500751720