Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq92765 87.8 2e-12 >seq92765 Length=3923 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 20239 ACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAAC 20298 |||| ||||||||||| ||| | || ||||||| ||| ||||||||||| || || Sbjct 531 ACCACAAACATGAGCAATCATGCATGTCAAGAGGGCATATGAAGCAATGTTAAACGGCAC 590 Query 20299 TCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 |||| ||||| || | || | |||||||| ||||| || | ||| || | ||| || Sbjct 591 ACCCAGGCCCATATCAGCAGAGCGCTGATACATTTGACATGATAACTCCCCATTAGCCAC 650 Query 20359 ATAAAATTGACATAACAA 20376 ||| || || || ||||| Sbjct 651 ATAGAACTGCCAAAACAA 668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440057023545920