Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0
01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq68514 156 1e-32
seq71848 145 2e-29
seq68470 132 1e-25
seq68153 118 2e-21
seq68152 114 3e-20
seq43779 109 1e-18
seq43799 107 5e-18
seq13742 105 2e-17
seq208088 96.9 8e-15
seq43778 91.5 3e-13
>seq68514
Length=8688
Score = 156 bits (172), Expect = 1e-32
Identities = 177/235 (75%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| ||||| || || || ||||| | ||| |||||||||||| || || |
Sbjct 823 CATG-CCACCACGGAGCCTGAGGACAAGATGCAAGGTGGATTCTTTTTGGATGTTGTAAT 765
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
|||| | || || |||||||| | ||| ||||| ||||||||||| | ||| ||
Sbjct 764 CGGCCAAGGTCCGGCCGTCTTCGAGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCGG 705
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418
|||||||| || || || ||||| || || |||||||| || || | ||| |||
Sbjct 704 GAGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTC- 646
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || ||||||||||||||||| || |||||||| ||||||||
Sbjct 645 --TCGACCTCGAGGGTAATCGTCTTCCCGGTCAGGGTTTTGACGAAGATCTGCAT 593
Score = 143 bits (158), Expect = 6e-29
Identities = 174/234 (74%), Gaps = 5/234 (2%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || || ||||| | || || || |||| || ||||| ||||| |||||||
Sbjct 1051 CATG-CCTCCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAGT 993
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| || | |||||| |||||||| ||||||||||| || ||||||| | ||||||
Sbjct 992 CAGCCAACGTGCGGCCGTCTTCCAATTGTTTTCCGGCAAAGATCAATCTTTGTTGATCTG 933
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
|||||| ||||| || || ||||| || || || || || || || | ||| | | |
Sbjct 932 GTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTATC--TGAACT 875
Query 288422 CT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| |||||||||||||| || || || |||||||| ||||||||
Sbjct 874 CTCCACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 821
Score = 138 bits (152), Expect = 3e-27
Identities = 173/235 (74%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || || ||||| || || ||||| || | ||| || || ||||| || || |
Sbjct 595 CATG-CCGCCACGGAGCCTGAGCACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAAT 537
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
|||| | ||||| || ||||| | ||| ||||| ||||||||||||||||| |||
Sbjct 536 CGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCG 477
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418
||||| || || || |||||||| || || || ||||| || || | || ||||
Sbjct 476 GAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTC- 418
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| |||||||| |||||||| || ||||| || || || ||||| ||||||||
Sbjct 417 --TCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 365
Score = 134 bits (148), Expect = 3e-26
Identities = 169/231 (73%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || || || || || ||||| | ||| ||||||||| || || || |||||
Sbjct 8216 TCCACCACGAAGCCTGAGGACAAGATGCAAAGTGGATTCTTTTTGAATGTTGTAATCGGC 8157
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| ||||| |||||||| | ||| || || || ||||| |||||||| || ||
Sbjct 8156 CAAAGTGCGGCCGTCTTCGAGTTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCCGGCGG 8097
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422
||||| || || |||||||| || || || ||||| || || | ||| ||| ||
Sbjct 8096 AATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTC---TC 8040
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||||||| ||||| ||||| ||||| || || || || |||||||||||
Sbjct 8039 CACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTTTTCACAAATATCTGCAT 7989
Score = 123 bits (136), Expect = 6e-23
Identities = 156/213 (73%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324
|| ||||||| || || || || || || || || || ||||| | ||| || ||
Sbjct 8425 ACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGCAAGCGTCCTTCCATCCTCC 8366
Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384
| || || ||||| |||||||| ||||| ||| | |||||| ||||| || ||||||
Sbjct 8365 AGCTGCTTCCCTGCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCTTCCTTGTCCTGG 8306
Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTC 288441
||||| || || | ||| || || | || |||| || ||||| || |||||||||
Sbjct 8305 ATTTTTGCCTTGATGTTGTCAATGGTGTCAGAGCTC---TCGACTTCCAGAGTGATCGTC 8249
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || ||||| || |||||||| |||||||||
Sbjct 8248 TTTCCCGTCAGGGTTTTGACGAAGATCTGCATT 8216
Score = 96.9 bits (106), Expect = 8e-15
Identities = 162/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| || || | || || ||||| | ||| || ||||| || ||||| ||
Sbjct 8674 TGACCACCACGAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCA 8615
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
|| | || || || || || | || || || || ||||| || | ||| ||| | |
Sbjct 8614 GCTAAAGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGT 8555
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420
|| || ||||| |||||||| || || || || || || || || | ||| |||
Sbjct 8554 GGAATCCCTTCCTTATCCTGAATCTTAGCCTTGACATTGTCAATGGTATCAGAACTC--- 8498
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || || || ||||| || |||||||||||||| ||||||||
Sbjct 8497 TCCACCTCCAGGGTAATTGTTTTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 8445
>seq71848
Length=4061
Score = 145 bits (160), Expect = 2e-29
Identities = 160/212 (75%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324
|| || || | |||| ||| || ||||| ||||| ||||| || ||||| ||||| ||
Sbjct 3820 ACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGCCAGGGTGCGGCCGTCCTCC 3879
Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384
| || || || |||||||| || | ||| || ||||| ||||| || ||||||
Sbjct 3880 AGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGG 3939
Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTC 288441
|| ||||| |||||||| || || | ||| ||| || || || || |||||||||
Sbjct 3940 ATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGCTC---TCCACCTCCAGGGTGATCGTC 3996
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||||||||||||||||||||| ||||||||
Sbjct 3997 TTCCCGGTCAGAGTCTTGACGAAGATCTGCAT 4028
Score = 120 bits (132), Expect = 7e-22
Identities = 166/231 (72%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || || || | ||| || ||||| || || || ||||||
Sbjct 3574 CCACCACGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCG 3633
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || || || |||||||| || | ||| || ||
Sbjct 3634 AGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 3693
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423
|| || ||||| |||||||| || || |||||||| || || | ||| ||| ||
Sbjct 3694 ATCCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGCTC---TCC 3750
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || || ||||||||||||||||||| ||||||||||| |||||||||
Sbjct 3751 ACCTCCAGGGTGATCGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCATT 3801
>seq68470
Length=2690
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| || || |||||||||| || || || |||||||| || || ||
Sbjct 661 CCACCACGGAGCCTGAGAACGAGATGAAGGGTTGACTCCTTCTGGATATTGTAATCAGCC 602
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| |||||||| | ||| || || || |||||||| | ||| || |||
Sbjct 601 AAGGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGG 542
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
||||| || || || || || ||||| || ||||| || || | || |||| ||
Sbjct 541 ATTCCCTCCTTGTCTTGAATCTTCGCCTTGACGTTATCGATCGTGTCTGAGCTC---TCA 485
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||||||||||||||| || || ||||| || ||||||||
Sbjct 484 ACCTCGAGGGTGATCGTCTTCCCGGTTAGGGTTTTGACAAAGATCTGCAT 435
Score = 109 bits (120), Expect = 1e-18
Identities = 154/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| || ||||||| || || || ||||| ||||| || || || || | ||| ||
Sbjct 1102 AGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCCGCAAGAGTCCTTCCATCC 1043
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| | ||||| || |||||||||| |||||| ||| ||| |||||||| |||||
Sbjct 1042 TCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGTGGAATTCCTTCCTTATCT 983
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATC 288438
|||||||| || || || || || || | || |||| || ||||| | || ||
Sbjct 982 TGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTC---TCAACTTCCAAAGTAATT 926
Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| || || ||||| || |||||||||||
Sbjct 925 GTTTTCCCAGTAAGGGTCTTAACAAATATCTGCAT 891
Score = 107 bits (118), Expect = 5e-18
Identities = 141/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|||||||| || || || ||||| | ||||| || ||||| || || || || ||||||
Sbjct 853 TCTTTTTGAATGTTGTAATCGGCCAAGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAG 794
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | || || ||||| || ||||| |||||||| || || || |||||
Sbjct 793 ATCAATCTTTGCTGGTCCGGCGGGATCCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTA 734
Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || | ||| ||| || || || || |||||||||||||| || || || |||
Sbjct 733 TCAATCGTATCCGAACTC---TCCACCTCCAGAGTGATCGTCTTCCCAGTTAGGGTTTTG 677
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 676 ACGAAGATCTGCAT 663
Score = 91.5 bits (100), Expect = 3e-13
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || ||||| | ||| || || || || ||||| || ||
Sbjct 1345 CCACCACGAAGGCGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCT 1286
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || || || | || || || || ||||| || | ||| ||| |||
Sbjct 1285 AAAGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGA 1226
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| ||||| || ||||| || || || || || || || |||| ||| |||| ||
Sbjct 1225 ATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATAGTATCTGAGCTC---TCC 1169
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || |||||||| |||| |||||||| |||||||||||
Sbjct 1168 ACCTCCAGAGTAATAGTCTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 1119
>seq68153
Length=714
Score = 118 bits (130), Expect = 2e-21
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || |||||||| | ||| || || || || || || || ||
Sbjct 59 CCACCACGGAGACGGAGGACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCA 118
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | || || || |||||||| || | ||| ||| | ||||
Sbjct 119 AGAGTACGCCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGG 178
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423
|| ||||| || ||||| || || || || ||||| || || | ||| ||| ||
Sbjct 179 ATCCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTATCCGAACTC---TCC 235
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || |||||||||||||||| |||||||| || ||||||||
Sbjct 236 ACCTCCAGGGTAATCGTCTTCCCGGTCAATGTCTTGACAAAAATCTGCAT 285
Score = 113 bits (124), Expect = 1e-19
Identities = 153/212 (72%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324
|| ||||||| || ||| || || || || || || || ||||| | ||| || ||
Sbjct 305 ACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCAAGCGTCCTTCCATCCTCC 364
Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384
| || || || |||||||||| |||||| || || || ||||| || ||||||
Sbjct 365 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGG 424
Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTC 288441
|| || || || ||||| || || | ||| ||| || |||||||| |||||||||
Sbjct 425 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTC---TCAACTTCGAGTGTGATCGTC 481
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || |||||||||||||||||
Sbjct 482 TTTCCCGTTAGGGTTTTGACGAATATCTGCAT 513
Score = 102 bits (112), Expect = 2e-16
Identities = 149/208 (72%), Gaps = 7/208 (3%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || || ||||| | ||| ||||| |||| || ||| || |||||||| || |
Sbjct 511 CATGCCC-CCACGGAGACGAAGCACGAGGTGAAGAGTTGATTCCTTCTGGATATTGTAAT 569
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
|||| | ||||| ||||| || | ||| ||||| ||||||||||| | ||| ||
Sbjct 570 CGGCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCG 629
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418
|| || ||||| || |||||||| || || || ||||| || || | || ||||
Sbjct 630 GCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTC- 688
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCC 288446
|| |||||||| || || ||||| ||
Sbjct 689 --TCAACTTCGAGAGTAATGGTCTTGCC 714
>seq68152
Length=1216
Score = 114 bits (126), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || |||||||| | ||| || || || || || || || ||
Sbjct 935 CCACCACGGAGACGGAGGACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCA 994
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | || || || |||||||| || | ||| ||| | ||||
Sbjct 995 AGAGTACGGCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGG 1054
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423
|| ||||| || ||||| || || || || || || || || | ||| ||| ||
Sbjct 1055 ATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATGGTATCCGAACTC---TCC 1111
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || |||||||||||||||| |||||||| || ||||||||
Sbjct 1112 ACCTCCAGGGTAATCGTCTTCCCGGTCAATGTCTTGACAAAAATCTGCAT 1161
>seq43779
Length=2831
Score = 109 bits (120), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||| | ||| || | |||| ||| || || ||||| |||||||| ||
Sbjct 193 CCACCCCTGAGACGAAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAGTCAGCA 252
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | ||||| || || ||||| || | || || ||||
Sbjct 253 AGAGTGCGACCATCCTCGAGCTGTTTACCGGCAAAGATGAGTCTTTGCTGGTCTGGTGGG 312
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| ||||| ||||||||||| || ||||| ||||| || || | || ||| |||
Sbjct 313 ATCCCTTCCTTATCCTGGATCTTGGCTTTTACGTTATCAATGGTGTCAGAGCT---TTCG 369
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || ||||| ||||| |||||||| || || || |||||
Sbjct 370 ACCTCAAGGGTTATGGTCTTGCCGGTGAGAGTCTTCACAAAGATTTGCAT 419
Score = 93.3 bits (102), Expect = 1e-13
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| || || ||||| || || || | |||||| || || ||
Sbjct 1 TCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAA 60
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | || || |||||||||||| || ||||| || || ||||| || ||
Sbjct 61 ATAAGCCTTTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTGGCTTTGACATTG 120
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| |||| ||| ||| || || || ||||| || || || || || ||||| ||
Sbjct 121 TCAATAGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTTACA 180
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 181 AAGATCTGCAT 191
>seq43799
Length=2218
Score = 107 bits (118), Expect = 5e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || |||||||||||||| || || ||||| || || || | ||||| || || ||
Sbjct 1026 TTCCTTCTGGATATTATAGTCAGCAAGTGTGCGACCATCCTCGAGCTGTTTACCAGCAAA 1085
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| || | ||| ||| |||||| ||||| || |||||||| || ||||| || ||
Sbjct 1086 GATAAGCCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCTTTTACATT 1145
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||| ||| || || || || || ||||| ||||| ||||| || ||
Sbjct 1146 ATCAATGGTGTCGGAGCTTTCAACCTCAAGGGTTATTGTCTTGCCGGTGAGAGTTTTCAC 1205
Query 288462 GAATATCTGCAT 288473
|| || |||||
Sbjct 1206 AAAGATTTGCAT 1217
>seq13742
Length=406
Score = 105 bits (116), Expect = 2e-17
Identities = 169/240 (70%), Gaps = 7/240 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| |||||||| | || || || || | || || || ||||| || || || ||
Sbjct 140 CCGCCGCGGAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCC 199
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| ||||| || | || ||||| ||||||||||| ||||| || |||
Sbjct 200 AAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGGA 259
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| ||||| || |||||||| || || || || || || || | || |||| ||
Sbjct 260 ATCCCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCGAAGCTC---TCC 316
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTC 288483
|| ||||| ||||| ||||| ||||||| ||| || || || ||||||| | ||||| ||
Sbjct 317 ACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCA-TCTGTTAATC 375
>seq208088
Length=533
Score = 96.9 bits (106), Expect = 8e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || ||||||||||| || ||||| || || || | |||||| || || ||
Sbjct 157 TCCTTCTGAATGTTATAGTCGGCAAGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAA 216
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | || || |||||| ||||| || ||||| ||||| ||||| || ||
Sbjct 217 ATAAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATTTTGGCTTTGACATTG 276
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| ||| || || || ||||| ||||| || || || ||||| ||
Sbjct 277 TCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACA 336
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 337 AAGATCTGCAT 347
Score = 87.8 bits (96), Expect = 4e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||||| || || | |||| ||| || || ||||| |||||||| ||
Sbjct 349 CCACCACGGAGTCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCA 408
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | |||||| || || ||||| || | || || ||||
Sbjct 409 AGAGTGCGGCCATCCTCGAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 468
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTAT 288407
|| ||||| ||||||||||| || ||||| || || || ||
Sbjct 469 ATCCCTTCCTTATCCTGGATCTTGGCTTTTACATTATCAAT 509
>seq43778
Length=4696
Score = 91.5 bits (100), Expect = 3e-13
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || || || | ||| || | |||| ||| || || || ||||| |||||||||
Sbjct 3277 CCTCCACGAAGGCGAAGGACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAGTCGGCG 3336
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||| ||||| | || || || || ||||| || | ||| || | |||
Sbjct 3337 AGGGTCCTTCCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGCGGG 3396
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTCT 288423
|| ||||| || || || || || ||||| || || || |||| ||| ||| ||
Sbjct 3397 ATGCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATAGTATC---CGAACTCTCA 3453
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | || || ||||| || || |||||||| || || || |||||
Sbjct 3454 ACTTCTAAGGTAATGGTCTTGCCAGTAAGAGTCTTAACAAAGATTTGCAT 3503
Score = 87.8 bits (96), Expect = 4e-12
Identities = 161/233 (69%), Gaps = 10/233 (4%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || ||||| | || || || |||||||| ||||| ||
Sbjct 2593 CCACCACGCAGGCGAAGGACAAGATGTAAAGTAGACTCCTTCTGGATATTGTAGTCAGCC 2652
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || || || | || || || || || |||| | ||| ||| |||||
Sbjct 2653 AAAGTACGCCCATCCTCCAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGA---TCTGGA 2709
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||| || ||||||||||| || ||||| || || || | | || | |||
Sbjct 2710 GGAATCCCTTCCTTGTCCTGGATTTTAGCCTTCACATTATCAATGG--TGTCTGAACTCT 2767
Query 288424 --ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || || ||||| || || || |||| ||||| ||||| |||||||||
Sbjct 2768 CAACCTCCAGGGTGATGGTTTTTCCTGTCAATGTCTTCACGAAAATCTGCATT 2820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1176049815574864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |