Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq68514 156 1e-32 seq71848 145 2e-29 seq68470 132 1e-25 seq68153 118 2e-21 seq68152 114 3e-20 seq43779 109 1e-18 seq43799 107 5e-18 seq13742 105 2e-17 seq208088 96.9 8e-15 seq43778 91.5 3e-13 >seq68514 Length=8688 Score = 156 bits (172), Expect = 1e-32 Identities = 177/235 (75%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| || || || ||||| | ||| |||||||||||| || || | Sbjct 823 CATG-CCACCACGGAGCCTGAGGACAAGATGCAAGGTGGATTCTTTTTGGATGTTGTAAT 765 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | || || |||||||| | ||| ||||| ||||||||||| | ||| || Sbjct 764 CGGCCAAGGTCCGGCCGTCTTCGAGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCGG 705 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418 |||||||| || || || ||||| || || |||||||| || || | ||| ||| Sbjct 704 GAGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTC- 646 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || ||||||||||||||||| || |||||||| |||||||| Sbjct 645 --TCGACCTCGAGGGTAATCGTCTTCCCGGTCAGGGTTTTGACGAAGATCTGCAT 593 Score = 143 bits (158), Expect = 6e-29 Identities = 174/234 (74%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | || || || |||| || ||||| ||||| ||||||| Sbjct 1051 CATG-CCTCCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAGT 993 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || | |||||| |||||||| ||||||||||| || ||||||| | |||||| Sbjct 992 CAGCCAACGTGCGGCCGTCTTCCAATTGTTTTCCGGCAAAGATCAATCTTTGTTGATCTG 933 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||||| ||||| || || ||||| || || || || || || || | ||| | | | Sbjct 932 GTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTATC--TGAACT 875 Query 288422 CT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| |||||||||||||| || || || |||||||| |||||||| Sbjct 874 CTCCACCTCGAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 821 Score = 138 bits (152), Expect = 3e-27 Identities = 173/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| || || ||||| || | ||| || || ||||| || || | Sbjct 595 CATG-CCGCCACGGAGCCTGAGCACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAAT 537 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | ||||| || ||||| | ||| ||||| ||||||||||||||||| ||| Sbjct 536 CGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCG 477 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 ||||| || || || |||||||| || || || ||||| || || | || |||| Sbjct 476 GAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTC- 418 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| |||||||| || ||||| || || || ||||| |||||||| Sbjct 417 --TCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 365 Score = 134 bits (148), Expect = 3e-26 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || || || || ||||| | ||| ||||||||| || || || ||||| Sbjct 8216 TCCACCACGAAGCCTGAGGACAAGATGCAAAGTGGATTCTTTTTGAATGTTGTAATCGGC 8157 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | ||||| |||||||| | ||| || || || ||||| |||||||| || || Sbjct 8156 CAAAGTGCGGCCGTCTTCGAGTTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCCGGCGG 8097 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422 ||||| || || |||||||| || || || ||||| || || | ||| ||| || Sbjct 8096 AATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTC---TC 8040 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| ||||| || || || || ||||||||||| Sbjct 8039 CACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTTTTCACAAATATCTGCAT 7989 Score = 123 bits (136), Expect = 6e-23 Identities = 156/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || ||||||| || || || || || || || || || ||||| | ||| || || Sbjct 8425 ACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGCAAGCGTCCTTCCATCCTCC 8366 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | || || ||||| |||||||| ||||| ||| | |||||| ||||| || |||||| Sbjct 8365 AGCTGCTTCCCTGCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCTTCCTTGTCCTGG 8306 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || | ||| || || | || |||| || ||||| || ||||||||| Sbjct 8305 ATTTTTGCCTTGATGTTGTCAATGGTGTCAGAGCTC---TCGACTTCCAGAGTGATCGTC 8249 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||| || |||||||| ||||||||| Sbjct 8248 TTTCCCGTCAGGGTTTTGACGAAGATCTGCATT 8216 Score = 96.9 bits (106), Expect = 8e-15 Identities = 162/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | || || ||||| | ||| || ||||| || ||||| || Sbjct 8674 TGACCACCACGAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCA 8615 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || | || || || || || | || || || || ||||| || | ||| ||| | | Sbjct 8614 GCTAAAGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGT 8555 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || ||||| |||||||| || || || || || || || || | ||| ||| Sbjct 8554 GGAATCCCTTCCTTATCCTGAATCTTAGCCTTGACATTGTCAATGGTATCAGAACTC--- 8498 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || ||||| || |||||||||||||| |||||||| Sbjct 8497 TCCACCTCCAGGGTAATTGTTTTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 8445 >seq71848 Length=4061 Score = 145 bits (160), Expect = 2e-29 Identities = 160/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || || || | |||| ||| || ||||| ||||| ||||| || ||||| ||||| || Sbjct 3820 ACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGCCAGGGTGCGGCCGTCCTCC 3879 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | || || || |||||||| || | ||| || ||||| ||||| || |||||| Sbjct 3880 AGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGG 3939 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTC 288441 || ||||| |||||||| || || | ||| ||| || || || || ||||||||| Sbjct 3940 ATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGCTC---TCCACCTCCAGGGTGATCGTC 3996 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||||||||||||||| |||||||| Sbjct 3997 TTCCCGGTCAGAGTCTTGACGAAGATCTGCAT 4028 Score = 120 bits (132), Expect = 7e-22 Identities = 166/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || ||||| || || || |||||| Sbjct 3574 CCACCACGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCG 3633 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || |||||||| || | ||| || || Sbjct 3634 AGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 3693 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || ||||| |||||||| || || |||||||| || || | ||| ||| || Sbjct 3694 ATCCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGCTC---TCC 3750 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || ||||||||||||||||||| ||||||||||| ||||||||| Sbjct 3751 ACCTCCAGGGTGATCGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCATT 3801 >seq68470 Length=2690 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || |||||||||| || || || |||||||| || || || Sbjct 661 CCACCACGGAGCCTGAGAACGAGATGAAGGGTTGACTCCTTCTGGATATTGTAATCAGCC 602 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| |||||||| | ||| || || || |||||||| | ||| || ||| Sbjct 601 AAGGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGG 542 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 ||||| || || || || || ||||| || ||||| || || | || |||| || Sbjct 541 ATTCCCTCCTTGTCTTGAATCTTCGCCTTGACGTTATCGATCGTGTCTGAGCTC---TCA 485 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||||||||| || || ||||| || |||||||| Sbjct 484 ACCTCGAGGGTGATCGTCTTCCCGGTTAGGGTTTTGACAAAGATCTGCAT 435 Score = 109 bits (120), Expect = 1e-18 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| || || || ||||| ||||| || || || || | ||| || Sbjct 1102 AGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCCGCAAGAGTCCTTCCATCC 1043 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | ||||| || |||||||||| |||||| ||| ||| |||||||| ||||| Sbjct 1042 TCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGTGGAATTCCTTCCTTATCT 983 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATC 288438 |||||||| || || || || || || | || |||| || ||||| | || || Sbjct 982 TGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTC---TCAACTTCCAAAGTAATT 926 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| || ||||||||||| Sbjct 925 GTTTTCCCAGTAAGGGTCTTAACAAATATCTGCAT 891 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 |||||||| || || || ||||| | ||||| || ||||| || || || || |||||| Sbjct 853 TCTTTTTGAATGTTGTAATCGGCCAAGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAG 794 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | || || ||||| || ||||| |||||||| || || || ||||| Sbjct 793 ATCAATCTTTGCTGGTCCGGCGGGATCCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTA 734 Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| ||| || || || || |||||||||||||| || || || ||| Sbjct 733 TCAATCGTATCCGAACTC---TCCACCTCCAGAGTGATCGTCTTCCCAGTTAGGGTTTTG 677 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 676 ACGAAGATCTGCAT 663 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||| | ||| || || || || ||||| || || Sbjct 1345 CCACCACGAAGGCGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCT 1286 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || | || || || || ||||| || | ||| ||| ||| Sbjct 1285 AAAGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGA 1226 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || ||||| || || || || || || || |||| ||| |||| || Sbjct 1225 ATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATAGTATCTGAGCTC---TCC 1169 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || |||||||| |||| |||||||| ||||||||||| Sbjct 1168 ACCTCCAGAGTAATAGTCTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 1119 >seq68153 Length=714 Score = 118 bits (130), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||| | ||| || || || || || || || || Sbjct 59 CCACCACGGAGACGGAGGACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCA 118 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || | ||| ||| | |||| Sbjct 119 AGAGTACGCCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGG 178 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || ||||| || ||||| || || || || ||||| || || | ||| ||| || Sbjct 179 ATCCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTATCCGAACTC---TCC 235 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||||||||||| |||||||| || |||||||| Sbjct 236 ACCTCCAGGGTAATCGTCTTCCCGGTCAATGTCTTGACAAAAATCTGCAT 285 Score = 113 bits (124), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || ||||||| || ||| || || || || || || || ||||| | ||| || || Sbjct 305 ACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCAAGCGTCCTTCCATCCTCC 364 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | || || || |||||||||| |||||| || || || ||||| || |||||| Sbjct 365 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGG 424 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTC 288441 || || || || ||||| || || | ||| ||| || |||||||| ||||||||| Sbjct 425 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTC---TCAACTTCGAGTGTGATCGTC 481 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||||||||||||||| Sbjct 482 TTTCCCGTTAGGGTTTTGACGAATATCTGCAT 513 Score = 102 bits (112), Expect = 2e-16 Identities = 149/208 (72%), Gaps = 7/208 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | ||| ||||| |||| || ||| || |||||||| || | Sbjct 511 CATGCCC-CCACGGAGACGAAGCACGAGGTGAAGAGTTGATTCCTTCTGGATATTGTAAT 569 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | ||||| ||||| || | ||| ||||| ||||||||||| | ||| || Sbjct 570 CGGCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCG 629 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 || || ||||| || |||||||| || || || ||||| || || | || |||| Sbjct 630 GCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTC- 688 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCC 288446 || |||||||| || || ||||| || Sbjct 689 --TCAACTTCGAGAGTAATGGTCTTGCC 714 >seq68152 Length=1216 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||| | ||| || || || || || || || || Sbjct 935 CCACCACGGAGACGGAGGACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCA 994 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || | ||| ||| | |||| Sbjct 995 AGAGTACGGCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGG 1054 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || ||||| || ||||| || || || || || || || || | ||| ||| || Sbjct 1055 ATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATGGTATCCGAACTC---TCC 1111 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||||||||||| |||||||| || |||||||| Sbjct 1112 ACCTCCAGGGTAATCGTCTTCCCGGTCAATGTCTTGACAAAAATCTGCAT 1161 >seq43779 Length=2831 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | ||| || | |||| ||| || || ||||| |||||||| || Sbjct 193 CCACCCCTGAGACGAAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAGTCAGCA 252 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | ||||| || || ||||| || | || || |||| Sbjct 253 AGAGTGCGACCATCCTCGAGCTGTTTACCGGCAAAGATGAGTCTTTGCTGGTCTGGTGGG 312 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || ||||| ||||| || || | || ||| ||| Sbjct 313 ATCCCTTCCTTATCCTGGATCTTGGCTTTTACGTTATCAATGGTGTCAGAGCT---TTCG 369 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| ||||| |||||||| || || || ||||| Sbjct 370 ACCTCAAGGGTTATGGTCTTGCCGGTGAGAGTCTTCACAAAGATTTGCAT 419 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| || || ||||| || || || | |||||| || || || Sbjct 1 TCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAA 60 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | || || |||||||||||| || ||||| || || ||||| || || Sbjct 61 ATAAGCCTTTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTGGCTTTGACATTG 120 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| ||| ||| || || || ||||| || || || || || ||||| || Sbjct 121 TCAATAGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTTACA 180 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 181 AAGATCTGCAT 191 >seq43799 Length=2218 Score = 107 bits (118), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || |||||||||||||| || || ||||| || || || | ||||| || || || Sbjct 1026 TTCCTTCTGGATATTATAGTCAGCAAGTGTGCGACCATCCTCGAGCTGTTTACCAGCAAA 1085 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | ||| ||| |||||| ||||| || |||||||| || ||||| || || Sbjct 1086 GATAAGCCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCTTTTACATT 1145 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||| || || || || || ||||| ||||| ||||| || || Sbjct 1146 ATCAATGGTGTCGGAGCTTTCAACCTCAAGGGTTATTGTCTTGCCGGTGAGAGTTTTCAC 1205 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 1206 AAAGATTTGCAT 1217 >seq13742 Length=406 Score = 105 bits (116), Expect = 2e-17 Identities = 169/240 (70%), Gaps = 7/240 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || || || || | || || || ||||| || || || || Sbjct 140 CCGCCGCGGAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCC 199 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| ||||| || | || ||||| ||||||||||| ||||| || ||| Sbjct 200 AAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGGA 259 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || |||||||| || || || || || || || | || |||| || Sbjct 260 ATCCCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCGAAGCTC---TCC 316 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTC 288483 || ||||| ||||| ||||| ||||||| ||| || || || ||||||| | ||||| || Sbjct 317 ACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCA-TCTGTTAATC 375 >seq208088 Length=533 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || ||||||||||| || ||||| || || || | |||||| || || || Sbjct 157 TCCTTCTGAATGTTATAGTCGGCAAGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAA 216 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | || || |||||| ||||| || ||||| ||||| ||||| || || Sbjct 217 ATAAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATTTTGGCTTTGACATTG 276 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| || || || ||||| ||||| || || || ||||| || Sbjct 277 TCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACA 336 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 337 AAGATCTGCAT 347 Score = 87.8 bits (96), Expect = 4e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||||| || || | |||| ||| || || ||||| |||||||| || Sbjct 349 CCACCACGGAGTCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCA 408 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | |||||| || || ||||| || | || || |||| Sbjct 409 AGAGTGCGGCCATCCTCGAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 468 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTAT 288407 || ||||| ||||||||||| || ||||| || || || || Sbjct 469 ATCCCTTCCTTATCCTGGATCTTGGCTTTTACATTATCAAT 509 >seq43778 Length=4696 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| || | |||| ||| || || || ||||| ||||||||| Sbjct 3277 CCTCCACGAAGGCGAAGGACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAGTCGGCG 3336 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||| | || || || || ||||| || | ||| || | ||| Sbjct 3337 AGGGTCCTTCCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGCGGG 3396 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTCT 288423 || ||||| || || || || || ||||| || || || |||| ||| ||| || Sbjct 3397 ATGCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATAGTATC---CGAACTCTCA 3453 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | || || ||||| || || |||||||| || || || ||||| Sbjct 3454 ACTTCTAAGGTAATGGTCTTGCCAGTAAGAGTCTTAACAAAGATTTGCAT 3503 Score = 87.8 bits (96), Expect = 4e-12 Identities = 161/233 (69%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || ||||| | || || || |||||||| ||||| || Sbjct 2593 CCACCACGCAGGCGAAGGACAAGATGTAAAGTAGACTCCTTCTGGATATTGTAGTCAGCC 2652 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || | || || || || || |||| | ||| ||| ||||| Sbjct 2653 AAAGTACGCCCATCCTCCAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGA---TCTGGA 2709 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || ||||||||||| || ||||| || || || | | || | ||| Sbjct 2710 GGAATCCCTTCCTTGTCCTGGATTTTAGCCTTCACATTATCAATGG--TGTCTGAACTCT 2767 Query 288424 --ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || ||||| || || || |||| ||||| ||||| ||||||||| Sbjct 2768 CAACCTCCAGGGTGATGGTTTTTCCTGTCAATGTCTTCACGAAAATCTGCATT 2820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176049815574864