Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq68514 114 1e-20 seq13742 109 6e-19 seq43778 107 2e-18 seq71848 105 7e-18 seq68153 104 3e-17 seq208088 98.7 1e-15 seq68470 95.1 1e-14 seq43779 93.3 5e-14 seq68152 91.5 2e-13 seq43799 89.7 6e-13 seq41899 89.7 6e-13 seq11653 87.8 2e-12 seq49145 86.0 7e-12 seq43798 84.2 2e-11 seq99008 82.4 8e-11 >seq68514 Length=8688 Score = 114 bits (126), Expect = 1e-20 Identities = 156/214 (73%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 |||||| ||| || |||||||| |||||||| |||| ||| || |||| || || || Sbjct 8192 ATGCAAAGTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTG 8133 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||| || || || ||||| ||||||||||| | || | | |||||||||| ||| || Sbjct 8132 CTTCCCGGCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTT 8073 Query 42125 TTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 42180 |||| ||| | | | ||||| |||| ||||| |||| ||||| || |||| Sbjct 8072 GGCCTTGA-CGTTGTCGATTGTGTCGGAGCTC---TCCACTTCGAGGGTGATTGTCTTGC 8017 Query 42181 CCGTTAGCGTCTTTACAAAGATTTGCATTTTCAC 42214 | || || || || ||||| || ||||| ||||| Sbjct 8016 CGGTGAGGGTTTTCACAAATATCTGCATCTTCAC 7983 Score = 104 bits (114), Expect = 3e-17 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || | ||||||||||| ||| | || |||||| ||||| |||||||| || Sbjct 8444 ACCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGC 8385 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | || || |||||||| || || || || || |||||||| || | ||| Sbjct 8384 AAGCGTCCTTCCATCCTCCAGCTGCTTCCCTGCAAAGATCAGGCGCTGCTGATCAGGTGG 8325 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | ||||||||| ||||||| |||| | | | ||||| |||| || Sbjct 8324 GATCCCTTCCTTGTCCTGGATTTTTGCCTTGATGTTGTCAATGGTGTCAGAGCTC---TC 8268 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || | ||||| || || ||||| || || || || ||||| |||||| Sbjct 8267 GACTTCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCATT 8216 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || || |||||||| || || || |||| ||||||||||| |||||||| Sbjct 1240 CTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCCGTCCTCTAGCTGCTTCCCAGCGAA 1181 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| | |||||| || | ||| | | ||||||||| ||| | |||| |||| Sbjct 1180 GATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCC-TGAATCTTTGCCTTGACAT 1122 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | || || ||| ||||| || | || || || || || || | |||| Sbjct 1121 TATCAATTGTATCAGAACTC---TCCACCTCCAGAGTAATAGTCTTCCCAGTCAAAGTCT 1065 Query 42193 TTACAAAGATTTGCAT 42208 | ||||| |||||||| Sbjct 1064 TGACAAAAATTTGCAT 1049 Score = 82.4 bits (90), Expect = 8e-11 Identities = 143/207 (69%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 |||||| ||| || ||||| || |||||||| |||| ||||| |||| || || || Sbjct 796 ATGCAAGGTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGTTG 737 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||| || ||||| || || | ||||||||||| || | | ||||||||| ||| || Sbjct 736 CTTTCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGGATCTT 677 Query 42125 TTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 42181 || | | | | |||||| |||| || || |||| || || || || || Sbjct 676 GGCCTTCACGTTATCGATCGTGTCGGAGCTC---TCGACCTCGAGGGTAATCGTCTTCCC 620 Query 42182 CGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || || ||||| ||||| Sbjct 619 GGTCAGGGTTTTGACGAAGATCTGCAT 593 >seq13742 Length=406 Score = 109 bits (120), Expect = 6e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| |||| || ||| |||| || |||||||| || ||||| Sbjct 175 CTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAA 234 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | ||| | | ||||||||| ||| || |||| | Sbjct 235 GATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTAGCCTTGACATT 294 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| |||| ||||| |||| |||||||| ||||| || | || || Sbjct 295 GTCGATCGTGTCGAAGCTC---TCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTT 351 Query 42194 TACAAAGATTTGCAT 42208 |||||||| ||||| Sbjct 352 CACAAAGATCTGCAT 366 >seq43778 Length=4696 Score = 107 bits (118), Expect = 2e-18 Identities = 154/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 ||||||||||||||||||| ||||| ||||| |||||||| || || |||| | | || Sbjct 2835 CAACACCAAATGCAATGTGGATTCCTTCTGAATGTTGTAATCTGCAAGGGTCCTCCCATC 2894 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || |||||||| || || || || | | ||||||||| | ||| | || |||||| || Sbjct 2895 TTCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGAATGCCCTCCTTATC 2954 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA---TTCCACATCGACCGTGAT 42172 ||| || || | | | | |||||| ||| || || || | ||||| Sbjct 2955 TTGGATCTTGGCCTTCACATTATCAATCGTGTC---CGAACTCTCTACCTCCAGAGTGAT 3011 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || || ||||| ||||| |||||||| Sbjct 3012 TGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 3047 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| |||||| ||||||||||| || || || |||| | || || Sbjct 3295 ACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAGTCGGCGAGGGTCCTTCCATCTTCA 3354 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||||||||| || || || | ||||||||| | || | || |||||||| || Sbjct 3355 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTCT-TG 3413 Query 42120 ATTTTTTGTTTGAGCGTCGCCACC-GTGTCG---CTCGATTCCACATCGACCGTGATGGT 42175 | | || | || | | | | || || || ||| || || || | || ||||| Sbjct 3414 AATCTTAGCTTTAACATTGTCAATAGTATCCGAACTC---TCAACTTCTAAGGTAATGGT 3470 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||| |||||||||||||| Sbjct 3471 CTTGCCAGTAAGAGTCTTAACAAAGATTTGCAT 3503 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || || | ||| | ||||| |||| || |||||| || || || ||||| || Sbjct 3961 CCACCCCTAAGACGAAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGCG 4020 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || ||| | || || ||||| |||||||| || || || | |||||| || | ||| Sbjct 4021 AGGGTGCGCCCATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGA 4080 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | ||||||||| ||| || ||||| | | | || || ||| ||| Sbjct 4081 ATCCCTTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATGGTATCAGAGCT---TTCA 4137 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | || |||||||| || || || ||||| |||||||||||||| Sbjct 4138 ACCTCAAGGGTTATGGTTTTTCCGGTGAGAGTCTTCACAAAGATTTGCAT 4187 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || | ||| | |||||||| | || ||||| || || ||||| || || Sbjct 3732 ACCACCCCTGAGACGAAGTACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGC 3791 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || || || || ||||| || ||||| | |||||||| | ||| Sbjct 3792 AAGTGTGCGTCCATCCTCAAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGG 3851 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGA---TT 42156 | | ||||| ||| ||| |||| | ||||| | | | ||||| ||| || Sbjct 3852 GATCCCTTCCTTATCC-TGAATTTTGGCTTTGACATTGTCAATGGTGTC---CGAGCTTT 3907 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || | || ||||| || || || || |||||||||||||||||||| Sbjct 3908 CCACCTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTTACAAAGATTTGCAT 3959 >seq71848 Length=4061 Score = 105 bits (116), Expect = 7e-18 Identities = 144/197 (73%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| |||||||| || |||||||| | || || |||||||| || ||||| Sbjct 3609 CTCCTTTTGAATGTTGTAATCGGCGAGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAA 3668 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| | ||||||||| | || | | ||| |||||| ||| || || | ||| Sbjct 3669 GATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTTGTCCTGGATCTTGGCCTTCA-CGT 3727 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| ||||| || | ||||| || || || || | ||||| Sbjct 3728 TGTCGATCGTGTCGGAGCTC---TCCACCTCCAGGGTGATCGTCTTCCCGGTCAACGTCT 3784 Query 42193 TTACAAAGATTTGCATT 42209 | || ||||| |||||| Sbjct 3785 TGACGAAGATCTGCATT 3801 >seq68153 Length=714 Score = 104 bits (114), Expect = 3e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || || | ||||||||||| ||| | || ||||| ||||| |||||||| || Sbjct 287 CCACCCCTCAGACGCAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCA 346 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | || || |||||||| |||||||| || | ||||||||||| | || Sbjct 347 AGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGA 406 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 42157 | | ||||||||| ||| || |||| ||| | | | |||||| |||| || Sbjct 407 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCGGAGCTC---TC 462 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| ||||| || || |||||||| || || || || || ||||| Sbjct 463 AACTTCGAGTGTGATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 513 Score = 95.1 bits (104), Expect = 1e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||||||||| ||||| ||| |||| || |||||||| |||||||| Sbjct 94 CTCCTTCTGAATGTTGTAATCAGCAAGAGTACGCCCGTCCTCAAGCTGCTTCCCAGCGAA 153 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCC 42116 ||||| | |||||| || | ||| | | ||||||||| Sbjct 154 GATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCC 193 >seq208088 Length=533 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||||| ||| | |||| || | |||| |||||| ||||| || || || || Sbjct 121 CCACCTCTTAGACGGAGGACCAGGTGGAGTGTGGACTCCTTCTGAATGTTATAGTCGGCA 180 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || || || || ||||| || || || | |||||||| | ||| Sbjct 181 AGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGGG 240 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||||||| ||| |||| | ||||| | | | |||||| |||||| Sbjct 241 ATCCCTTCCTTGTCC-TGAATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCAC 299 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| || || || || || |||||||||||||| ||||| Sbjct 300 CTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 347 >seq68470 Length=2690 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || |||||||||||||||| || || |||| || || ||||| ||||| || Sbjct 626 CTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAA 567 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || | ||||||||| | || | | |||||||| | ||| | || | |||| Sbjct 566 GATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGT-CTTGAATCTTCGCCTTGACGT 508 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || |||| ||||| || || || ||||| || | Sbjct 507 TATCGATCGTGTCTGAGCTC---TCAACCTCGAGGGTGATCGTCTTCCCGGTTAGGGTTT 451 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 450 TGACAAAGATCTGCAT 435 >seq43779 Length=2831 Score = 93.3 bits (102), Expect = 5e-14 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || | ||| | ||||| || | ||| |||||| || || || || ||||| Sbjct 192 ACCACCCCTGAGACGAAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAGTCAGC 251 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || ||||| ||||| || || ||||||| |||||||| | ||| Sbjct 252 AAGAGTGCGACCATCCTCGAGCTGTTTACCGGCAAAGATGAGTCTTTGCTGGTCTGGTGG 311 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | ||||| ||| ||| || ||| | | | | ||||| ||| ||| Sbjct 312 GATCCCTTCCTTATCCTGGATCTTGGCTTTTACGTTATCAATGGTGTCAGAGCT---TTC 368 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | || ||||| ||||| || || ||||| |||||||||||||| Sbjct 369 GACCTCAAGGGTTATGGTCTTGCCGGTGAGAGTCTTCACAAAGATTTGCAT 419 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || || || || || | || || || || || ||||| || Sbjct 1 TCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAA 60 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || || | |||||||| | ||| | | ||||||||| ||| | || | ||||| | Sbjct 61 ATAAGCCTTTGCTGGTCTGGTGGGATTCCTTCCTTGTCC-TGAATCTTGGCTTTGACATT 119 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| |||||| || | ||||| ||||| || || || |||||||| Sbjct 120 GTCAATAGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTTAC 179 Query 42197 AAAGATTTGCAT 42208 |||||| ||||| Sbjct 180 AAAGATCTGCAT 191 >seq68152 Length=1216 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||||||||| ||||| || |||| || |||||||| |||||||| Sbjct 970 CTCCTTCTGAATGTTGTAATCAGCAAGAGTACGGCCGTCCTCAAGCTGCTTCCCAGCGAA 1029 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCC 42116 ||||| | |||||| || | ||| | | ||||||||| Sbjct 1030 GATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCC 1069 >seq43799 Length=2218 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || || |||||||| || || || | || || ||||| ||||| || || Sbjct 798 CTCCTTCTGGATGTTATAATCAGCAAGTGTGCGACCATCCTCGAGCTGTTTACCGGCAAA 857 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | ||||||||| | ||| | | ||||||||| ||| | || | || | | Sbjct 858 GATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCC-TGAATCTTGGCTTTCACAT 916 Query 42137 CGCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || | ||||| |||||| || | || || || ||||| || || ||||||| Sbjct 917 TGTCAATGGTGTCGGAGCTTTCCACCTCAAGAGTAATCGTCTTGCCAGTGAGGGTCTTTA 976 Query 42196 CAAAGATTTGCAT 42208 ||||||| ||||| Sbjct 977 CAAAGATCTGCAT 989 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || || | ||| | |||||||| | || ||||| || || ||||| || || Sbjct 535 CCACCCCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCA 594 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || ||||| || ||||| || || ||||| | |||||||| | ||| Sbjct 595 AGTGTGCGTCCATCCTCTAGTTGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 654 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | ||||| ||| ||| |||| | ||||| | | | ||||| ||| ||| Sbjct 655 ATCCCTTCCTTATCC-TGAATTTTGGCTTTGACATTGTCAATGGTGTCAGAGCT---TTC 710 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || | ||||| || || || || || |||||||||||||| ||||| Sbjct 711 CACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 761 >seq41899 Length=578 Score = 89.7 bits (98), Expect = 6e-13 Identities = 166/237 (70%), Gaps = 10/237 (4%) Strand=Plus/Minus Query 41977 ATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAAT 42036 |||| || || |||| ||| | || || || | ||| |||||||||||| ||||||| Sbjct 232 ATCG-CCACCACTTAGACGGAGGACAAAGTGGAGAGTGGACTCCTTTTGAATGTTGTAAT 174 Query 42037 CAGCCAGAGTCCGCTCGTCATC-TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 42095 | || |||||| |||| || | ||||| | ||||| ||||| | ||||||| | Sbjct 173 CGGCGCGAGTCCAGCCGTCCTCAAAATTGCTTGCTGGCGAAGATGAGCCTCTGCTGGCCC 114 Query 42096 GCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCT 42151 | || | | |||||||||| ||| | || || | ||| | | | |||||| ||| Sbjct 113 GGCGGAATCCCCTCCTTGTCC-TGAATCTTCGTCTTCACGTTGTCGATCGTGTCGGAGCT 55 Query 42152 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | ||||| || ||||||||||| || || |||||| || ||||| ||||| Sbjct 54 C---TCCACCTCCTGAGTGATGGTTTTCCCGGTCGACGTCTTGACGAAGATCTGCAT 1 >seq11653 Length=224 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| |||| || |||||||| || |||||||| || ||||| Sbjct 151 CTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCTCGTCCTCAAGCTGCTTTCCGGCGAA 92 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 || |||||||||||||| | ||| | | || |||||| ||| || Sbjct 91 GATCAGTCGCTGCTGGTCCGGTGGAATCCCTTCGTTGTCCTGGATCTT 44 >seq49145 Length=1022 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| |||| || ||| |||| || |||||||| |||||||| Sbjct 837 CTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCAGCGAA 778 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCC 42116 || || ||||||||||| | ||| | | ||||||||| Sbjct 777 GATCAGCCGCTGCTGGTCTGGTGGAATCCCTTCCTTGTCC 738 >seq43798 Length=861 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | ||| | ||| | ||||| ||| |||||| || || ||||||||||| Sbjct 679 ACCTCCACGGAGACGGAGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCAGC 738 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||||| | || || || ||||| ||||| || || | | ||||||||||| ||| Sbjct 739 AAGAGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCGGGTGG 798 Query 42101 CACGCTCTCCTTGTCCATGATTTT 42124 | | |||||| ||| ||| || Sbjct 799 AATCCCCTCCTTATCCTGGATCTT 822 >seq99008 Length=1232 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| || || || || | |||| || |||||||| || ||||| Sbjct 15 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 74 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||||| ||||||||||| | ||| | | |||||||||| ||| || Sbjct 75 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTT 122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541593428321920