Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0
01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq68153 132 4e-26
seq68470 131 2e-25
seq68514 125 6e-24
seq43778 122 8e-23
seq43799 118 1e-21
seq71848 113 4e-20
seq13742 113 4e-20
seq43779 111 1e-19
seq208088 102 7e-17
seq72069 93.3 4e-14
seq109229 84.2 2e-11
>seq68153
Length=714
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| ||||| || || || || || |||||||| || | ||
Sbjct 513 ATGCAGATATTCGTCAAAACCCTAACGGGAAAGACGATCACACTCGAAGTTGAGAGCTCC 454
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || || ||
Sbjct 453 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAG 394
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||||||||||| || || || |||||||||||| || | | | ||||| |||
Sbjct 393 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGAAGGACGCTTGCGGATTACAAC 334
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||||| |||||||| || || || |||||||||| || | || |||
Sbjct 333 ATTCAGAAGGAATCAACTCTTCATCTGGTGTTGCGTCTGAGGGGTGGC 286
>seq68470
Length=2690
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| |||| || || || || ||||| ||||| | ||||| || | |
Sbjct 891 ATGCAGATATTTGTTAAGACCCTTACTGGGAAAACAATTACTTTGGAAGTTGAGAGCTCA 950
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || ||| |||||||| || |||||||| || || |||||
Sbjct 951 GACACAATTGACAATGTCAAGGCAAAAATCCAAGATAAGGAAGGAATTCCACCGGATCAG 1010
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||||||||||| || || |||||||| |||||| || | | | |||||||||
Sbjct 1011 CAGCGTTTGATCTTCGCTGGCAAACAGCTTGAGGATGGAAGGACTCTTGCGGATTATAAC 1070
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| ||||| || || |||| ||||
Sbjct 1071 ATCCAGAAGGAGTCGACCCTTCATCTGGTTCTGCG 1105
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| || ||||| ||||||||||| |||||||| || | ||
Sbjct 207 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAAACTATTACTCTCGAAGTCGAGAGCTCC 266
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| |||||||| || ||||| || || || ||
Sbjct 267 GACACCATCGACAACGTCAAGGCGAAGATTCAAGACAAGGAGGGAATTCCCCCGGACCAG 326
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||| || || |||||||| ||||| | | | || | ||||| |||
Sbjct 327 CAGAGGCTTATCTTCGCTGGAAAACAGCTCGAGGACGGCCGCACCTTGGCCGATTACAAC 386
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || || | || | || | |||||||||
Sbjct 387 ATACAGAAGGAGTCAACCCTCCATCTTGTCCTTCGTCTACGCGGAGGC 434
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
||||| ||||||||||| |||||||| || | | ||||| | || | |||||
Sbjct 3 ACCGGCAAAACTATTACTCTCGAAGTCGAGAGCTCGGACACCATCGACAACGTAAAGGCC 62
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||||||||| || ||||| || || || || || | | |||||||| || ||
Sbjct 63 AAGATCCAAGACAAGGAGGGAATTCCGCCGGACCAGCAGAGGCTTATCTTTGCTGGAAAG 122
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| ||||| | | | || | ||||| ||||| || ||||| || || || ||
Sbjct 123 CAGCTCGAGGACGGCCGCACCTTGGCCGATTACAACATCCAGAAGGAGTCAACCCTTCAT 182
Query 24908 TTGGTGTTGCGATTGCGCGGAGGC 24931
| || | || | |||||||||
Sbjct 183 CTTGTCCTTCGTCTCCGCGGAGGC 206
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| ||||| || || || || || || || || || |
Sbjct 663 ATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAGGTGGAGAGTTCG 722
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| |||||||| || || || || || ||
Sbjct 723 GATACGATTGATAACGTCAAGGCCAAGATCCAGGACAAAGAGGGGATCCCGCCGGACCAG 782
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||||||| ||||| || ||| |||| ||| | | | || | ||||| |||
Sbjct 783 CAAAGATTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGCACCTTGGCCGATTACAAC 842
Query 24884 ATTCAAAAGGAATCGACACTACAC 24907
|||||||| || || || || |||
Sbjct 843 ATTCAAAAAGAGTCAACTCTCCAC 866
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| |||||||| || || || || ||||| || || | |
Sbjct 435 ATGCAGATCTTTGTCAAAACCCTAACCGGGAAGACGATCACCCTCGAGGTTGAGAGCTCA 494
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| |||||||| || ||||| || || || ||
Sbjct 495 GACACGATCGATAACGTCAAGGCGAAGATTCAAGACAAGGAGGGAATCCCCCCGGACCAG 554
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || || ||||| || | | | || | ||||| ||
Sbjct 555 CAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCCGCACCTTGGCTGATTACAAT 614
Query 24884 ATTCAAAAGGAATCGACACTACA 24906
|| || ||||| || || || ||
Sbjct 615 ATCCAGAAGGAGTCAACCCTTCA 637
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | || || | || || || |||||||| || || || || | |
Sbjct 1119 ATGCAGATATTTGTCAAGACCTTGACTGGGAAGACTATTACTCTGGAGGTGGAGAGCTCA 1178
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||| || ||||| ||||| || || || |||||
Sbjct 1179 GATACTATTGATAATGTTAAGGCAAAGATTCAGGACAAGGAAGGGATTCCACCAGATCAG 1238
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| ||||| ||||| |||||| | | | | |||||||||
Sbjct 1239 CAGAGGCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGTACTTTAGCTGATTATAAC 1298
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
||||| ||||| || || || || ||||
Sbjct 1299 ATTCAGAAGGAGTCCACCCTCCATCTTG 1326
>seq68514
Length=8688
Score = 125 bits (138), Expect = 6e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| || || || || || || || || ||||| || | |
Sbjct 8217 ATGCAGATCTTCGTCAAAACCCTGACGGGAAAGACGATCACTCTGGAAGTCGAGAGCTCT 8276
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || ||| || ||||| ||||| ||||| ||||| || || || |||||
Sbjct 8277 GACACCATTGACAACATCAAGGCAAAA-ATCCAGGACAAGGAAGGGATCCCACCTGATCA 8335
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || |||||||||| ||||| |||||||||||| || | | | ||||| ||
Sbjct 8336 GCAGCGCCTGATCTTTGCAGGGAAGCAGCTGGAGGATGGAAGGACGCTTGCGGATTACAA 8395
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|||||| ||||| ||||| || || ||||||||||
Sbjct 8396 CATTCAGAAGGAGTCGACTCTTCATCTGGTGTTGCG 8431
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| |||||||| ||||| || || |||||||| || | |
Sbjct 365 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACGATCACTCTCGAAGTGGAGAGCTCT 424
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || ||||| |||||
Sbjct 425 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGATCAG 484
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| ||||| || || || || ||| | | | || | ||||| |||
Sbjct 485 CAGCGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTACAAC 544
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| || || || ||| | |||
Sbjct 545 ATCCAGAAGGAGTCAACGCTCCACCTCGTG 574
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | ||||| || ||||| || || || || |||||||| || | |
Sbjct 7988 GATGCAGATATTTGTGAAAACCCTCACCGGCAAGACAATCACCCTCGAAGTGGAGAGCTC 8047
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||||| | || | || || |||||||| ||||| || ||||| || || || ||
Sbjct 8048 CGACACAATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGACCA 8107
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| | |||||||||||||| || || || || | | || | ||||| ||
Sbjct 8108 GCAGCGTCTCATCTTTGCCGGGAAGCAACTCGAAGACGGCCGCACTTTGGCCGATTACAA 8167
Query 24883 CATTCAAAAGGAATCGAC 24900
||||||||| ||||| ||
Sbjct 8168 CATTCAAAAAGAATCCAC 8185
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| || ||||| || || ||||| ||||| || || | ||
Sbjct 593 ATGCAGATCTTCGTCAAAACCCTGACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTCC 652
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || ||||| |||||||| ||
Sbjct 653 GACACGATCGATAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCAG 712
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||| ||||| || || || || || | | | || | ||||| |||
Sbjct 713 CAGAGGCTGATCTTCGCCGGAAAGCAACTCGAAGACGGCCGGACCTTGGCCGATTACAAC 772
Query 24884 ATTCAAAAGGAATCGAC 24900
|| ||||| ||||| ||
Sbjct 773 ATCCAAAAAGAATCCAC 789
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| ||||| || || || || || ||||| || || |
Sbjct 821 ATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTCGAGGTGGAGAGTTCA 880
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||||||||| ||||| || || || ||||||
Sbjct 881 GATACGATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAA 940
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||||||||||||| ||||| |||| || | | || | || ||||||
Sbjct 941 CAAAGATTGATCTTTGCCGGAAAACAATTGGAAGACGGCCGCACGTTGGCTGACTATAAC 1000
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || || || || || ||| | || | || | || ||||||
Sbjct 1001 ATCCAGAAAGAGTCAACTCTTCACCTTGTCCTCCGTCTCCGTGGAGGC 1048
>seq43778
Length=4696
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| |||||| | || || || ||||| ||||| || || || || || ||| | |
Sbjct 4188 GATGCAAATCTTTGTGAAGACTCTCACCGGAAAAACCATAACCCTTGAGGTTGAAAGCTC 4129
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || | || ||| |||||||| ||||| ||||| || || || |||||
Sbjct 4128 TGATACCATTGATAATGTCAAAGCTAAGATCCAGGACAAGGAAGGGATTCCACCAGATCA 4069
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||||||| || |||||||| |||||| | | | | | | ||||||||
Sbjct 4068 GCAGAGGCTTATCTTTGCTGGTAAACAGCTTGAGGATGGGCGCACCCTCGCCGATTATAA 4009
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || ||||| ||||| || ||||||||
Sbjct 4008 CATCCAGAAGGAGTCGACCCTGCACTTGGT 3979
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | || || || || || ||||| || || || || ||||| |
Sbjct 3047 ATGCAAATTTTTGTGAAGACTCTCACTGGAAAAACAATCACTCTGGAGGTAGAGAGTTCG 2988
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||| || || || || || || || ||
Sbjct 2987 GACACGATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATTCCACCAGACCAG 2928
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||| ||||| || || ||||| || ||| ||| | | | ||||||| |||
Sbjct 2927 CAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAAGATGGGAGGACCCTTGCAGATTACAAC 2868
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| |||||||| ||| | || ||||||||| || |||| |||||
Sbjct 2867 ATTCAGAAGGAATCCACATTGCATTTGGTGTTGAGACTGCGTGGAGG 2821
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| || || ||||||||||| || | || || ||| | |
Sbjct 3731 ATGCAGATTTTTGTGAAAACCCTGACTGGTAAAACTATAACTTTGGAGGTTGAAAGCTCT 3672
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || ||||| || ||||| || || || |||||||||||
Sbjct 3671 GACACAATCGACAATGTCAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCAG 3612
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| || ||||| || || ||| | | | | || || |||
Sbjct 3611 CAGAGATTGATCTTTGCTGGCAAACAACTTGAAGATGGCCGTACTCTAGCTGACTACAAC 3552
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| || || || |||||||||
Sbjct 3551 ATCCAGAAGGAGTCAACCCTCCACTTGGTG 3522
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || || || | || || ||| |
Sbjct 3275 ATGCAGATCTTTGTGAAGACTTTGACTGGGAAGACCATCACTTTGGAGGTGGAAAGTTCA 3216
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| |||| | || || ||||||||||| || || || || |||||||| ||
Sbjct 3215 GACACCATAGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGACCAG 3156
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||| ||||| || || ||||| || ||| || | | | |||||||||||
Sbjct 3155 CAGAGGTTGATTTTTGCTGGCAAGCAGCTTGAAGATGGTAGGACCCTTGCAGATTATAAC 3096
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| ||||| || || || ||||||||
Sbjct 3095 ATTCAGAAGGAGTCCACCCTTCACTTGGT 3067
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/208 (69%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || | || || ||||| || || || || || || |
Sbjct 2819 ATGCAGATTTTCGTGAAGACATTGACAGGAAAAACCATCACCCTGGAGGTTGAGAGTTCA 2760
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || ||||| ||||| ||||| || ||||| |||||
Sbjct 2759 GACACCATTGATAATGTGAAGGCTAAAATCCAGGACAAGGAAGGGATTCCTCCAGATCAG 2700
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||| ||||||||||| |||||||||||| | | | || | || || ||
Sbjct 2699 CAGAGGTTGATTTTTGCCGGGAAGCAGCTGGAGGATGGGCGTACTTTGGCTGACTACAAT 2640
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
|| || ||||| || || |||| ||||
Sbjct 2639 ATCCAGAAGGAGTCTACTTTACATCTTG 2612
>seq43799
Length=2218
Score = 118 bits (130), Expect = 1e-21
Identities = 155/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || ||||| || || || ||| | ||
Sbjct 989 ATGCAGATCTTTGTAAAGACCCTCACTGGCAAGACGATTACTCTTGAGGTGGAAAGCTCC 930
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||| || ||||| ||||| || || || || ||
Sbjct 929 GACACCATTGACAATGTGAAAGCCAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAG 870
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|| | | ||||||||||| |||||||| |||||| ||| | || || | |||||||
Sbjct 869 CAGAGGCTTATCTTTGCCGGTAAACAGCTCGAGGATGGTCG-CACACTTG-CTGATTATA 812
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912
|||| || ||||| || || || ||||||||
Sbjct 811 ACATCCAGAAGGAGTCAACCCTCCACTTGGT 781
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| || || || ||||| ||||| || || || ||| |
Sbjct 305 ATGCAGATCTTTGTGAAAACCCTCACTGGAAAAACAATTACTCTTGAGGTTGAAAGTTCT 246
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||| || |||||||| || || || || || |||||
Sbjct 245 GACACCATCGACAATGTGAAAGCAAAAATTCAAGACAAGGAGGGTATCCCACCAGATCAG 186
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | || ||||| || || ||||| || ||| || | | |||| ||||||
Sbjct 185 CAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAAC 126
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || || ||||| || || ||||||||
Sbjct 125 ATCCAGAAAGAATCCACTCTTCACTTGGT 97
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| || || ||||| ||||| || | || || ||| | |
Sbjct 533 ATGCAGATTTTTGTGAAAACCCTGACTGGTAAGACTATAACTTTGGAGGTTGAAAGCTCT 474
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || ||||||
Sbjct 473 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCTGATCAA 414
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|| | || ||||||||||| ||||| || || ||| ||| | | || | || || |
Sbjct 413 CAGAGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGTCG-TACTCTTG-CTGACTACA 356
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||| || ||||| || || || || ||||||
Sbjct 355 ACATCCAGAAGGAGTCAACCCTCCATTTGGTG 324
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || ||||| || || || || ||| | |
Sbjct 761 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCT 702
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| || || || || || ||||| || || || || ||
Sbjct 701 GACACCATTGACAATGTCAAAGCCAAAATTCAGGATAAGGAAGGGATCCCACCAGACCAG 642
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882
||| | | ||||||||||| ||||| || ||||| | || ||| | |||| || ||
Sbjct 641 CAAAGGCTCATCTTTGCCGGTAAACAACTAGAGGA-TGGACGCACACTTGCAGACTACAA 583
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || |||||||| || || || |||||
Sbjct 582 CATCCAGAAGGAATCAACCCTTCATTTGGT 553
>seq71848
Length=4061
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || || || || || | ||
Sbjct 4028 ATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCC 3969
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || || ||
Sbjct 3968 GACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGGATCCCCCCGGACCAG 3909
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||| ||||| || ||||||||||| | | | || | |||||||||
Sbjct 3908 CAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGATTATAAC 3849
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || |||||||| || || ||| | |||||||| || | |||||
Sbjct 3848 ATCCAGAAGGAATCCACGCTCCACCTTGTGTTGCGCCTGAGGGGAGG 3802
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||| | ||||| || || || || || || || || | ||
Sbjct 3800 ATGCAGATCTTCGTCAAGACGTTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCC 3741
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| |||||||| || || ||||| || ||
Sbjct 3740 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAAGAGGGGATTCCTCCGGACCAG 3681
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||| ||||| || ||||| |||||| | | | | ||||| |||
Sbjct 3680 CAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCGCCGATTACAAC 3621
Query 24884 ATTCAAAAGGAATCGACACTACAC 24907
||||||||||| || || || |||
Sbjct 3620 ATTCAAAAGGAGTCCACTCTCCAC 3597
>seq13742
Length=406
Score = 113 bits (124), Expect = 4e-20
Identities = 169/239 (71%), Gaps = 1/239 (0%)
Strand=Plus/Minus
Query 24693 TGATTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAG 24752
||||| | | ||||||||||||| | ||||| | ||||| || || || || ||||| |
Sbjct 376 TGATTAACA-GATGCAGATCTTTGTGAAAACTTTGACCGGCAAGACCATCACTCTCGAGG 318
Query 24753 TAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATAC 24812
| || | |||||| | || | || || |||||||| ||||| ||||| || |
Sbjct 317 TGGAGAGCTTCGACACGATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGGATTC 258
Query 24813 CTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGT 24872
| || || || || || ||||||| ||||| || ||||| ||||| | | | | ||
Sbjct 257 CACCGGACCAGCAGCGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCTTGG 198
Query 24873 CAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
| ||||| ||||| || ||||| ||||| || ||| | || | || | ||||| |||
Sbjct 197 CGGATTACAACATCCAGAAGGAGTCGACTCTCCACCTTGTCCTCCGTCTCCGCGGCGGC 139
>seq43779
Length=2831
Score = 111 bits (122), Expect = 1e-19
Identities = 154/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| |||||| | || || || ||||| || || || || || || || ||| | |
Sbjct 420 GATGCAAATCTTTGTGAAGACTCTCACCGGCAAGACCATAACCCTTGAGGTCGAAAGCTC 361
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | |||||| |||||||| || || ||||| || || || || ||
Sbjct 360 TGACACCATTGATAACGTAAAAGCCAAGATCCAGGATAAGGAAGGGATCCCACCAGACCA 301
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880
||| | | ||||||||||| |||||||| |||||| ||| | | || | || |||
Sbjct 300 GCAAAGACTCATCTTTGCCGGTAAACAGCTCGAGGATGGTCG-CACTCTTG-CTGACTAT 243
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| || ||||| || || || ||||||||
Sbjct 242 AACATCCAGAAGGAGTCCACTCTTCACTTGGT 211
Score = 100 bits (110), Expect = 3e-16
Identities = 140/193 (73%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || |||||||| || || || || ||| | ||
Sbjct 191 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAAACTATCACCCTTGAGGTGGAAAGCTCC 132
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||| || ||||| |||||||| || || || ||
Sbjct 131 GACACTATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAG 72
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
||| | | || ||||| || ||||| || |||||| ||| | || || |||| || |
Sbjct 71 CAAAGGCTTATTTTTGCTGGCAAACAACTTGAGGATGGTCG-CACACTTG-CAGACTACA 14
Query 24882 ACATTCAAAAGGA 24894
|||| || |||||
Sbjct 13 ACATCCAGAAGGA 1
>seq208088
Length=533
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || ||||| || || || || ||| | ||
Sbjct 347 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCC 288
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| || || || ||||| ||||| || || || || ||
Sbjct 287 GACACCATTGACAATGTCAAAGCCAAAATTCAGGACAAGGAAGGGATCCCACCAGACCAG 228
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | | || ||||| || ||||| || |||||| | | | | | || ||||||
Sbjct 227 CAAAGGCTTATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACCCTTGCCGACTATAAC 168
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| ||||| || ||||| ||| ||||
Sbjct 167 ATTCAGAAGGAGTCCACACTCCACCTGGT 139
>seq72069
Length=2032
Score = 93.3 bits (102), Expect = 4e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 24794 CAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTG 24853
|| ||||| ||||| || ||||| ||||| || | |||| ||||| || ||||| ||
Sbjct 190 CAGGACAAGGAAGGCATTCCTCCGGATCAGCAGAGACTGATTTTTGCTGGTAAACAATTG 249
Query 24854 GAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912
|| ||| |||| | |||||||||||||||||||||| ||||| || ||||||||
Sbjct 250 GAAGATGGCAGAACGCTTGCAGATTATAACATTCAAAAGGAGTCGACGCTTCACTTGGT 308
>seq109229
Length=2153
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 24794 CAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTG 24853
|| ||||| ||||| || ||||| ||||| || | ||||| ||||| |||||||| ||
Sbjct 515 CAGGACAAGGAAGGCATTCCTCCGGATCAGCAGAGATTGATTTTTGCTGGGAAACAATTG 456
Query 24854 GAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912
|| ||| | | | | |||||||||||||| ||||| || ||||| ||||||||
Sbjct 455 GAAGATGGCCGTACTCTTGCTGATTATAACATTCAGAAGGAGTCAACACTTCACTTGGT 397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448556410264640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |